RNA–Protein interactions for RNA: ENST00000376809.9

HLA-A-203, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,611 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-203ENST00000376809 TSHBP01222 138 aa12.3□□□□□ -0.44
HLA-A-203ENST00000376809 NTM-AS1Q6ZSK4 140 aa12.3□□□□□ -0.44
HLA-A-203ENST00000376809 NXT2Q9NPJ8 142 aaKnown RBP12.3□□□□□ -0.44
HLA-A-203ENST00000376809 FCER1GP30273 86 aa12.29□□□□□ -0.44
HLA-A-203ENST00000376809 BAGE3Q86Y29 109 aa12.29□□□□□ -0.44
HLA-A-203ENST00000376809 TRBV6-8A0A0A6YYG3 113 aa12.28□□□□□ -0.44
HLA-A-203ENST00000376809 AMTP48728 403 aa12.28□□□□□ -0.44
HLA-A-203ENST00000376809 TMEM97Q5BJF2 176 aa12.28□□□□□ -0.44
HLA-A-203ENST00000376809 FA2HQ7L5A8 372 aa12.28□□□□□ -0.44
HLA-A-203ENST00000376809 URB1-AS1Q96HZ7 61 aa12.28□□□□□ -0.44
HLA-A-203ENST00000376809 CCL18P55774 89 aa12.27□□□□□ -0.44
HLA-A-203ENST00000376809 Q0VG73 95 aa12.27□□□□□ -0.44
HLA-A-203ENST00000376809 NIT1Q86X76 327 aa12.27□□□□□ -0.44
HLA-A-203ENST00000376809 LYSTQ99698 3801 aa12.27□□□□□ -0.45
HLA-A-203ENST00000376809 TRBV25-1A0A075B6N4 114 aa12.26□□□□□ -0.45
HLA-A-203ENST00000376809 IGHV1-24A0A0C4DH33 117 aa12.26□□□□□ -0.45
HLA-A-203ENST00000376809 TIRAPP58753 221 aa12.26□□□□□ -0.45
HLA-A-203ENST00000376809 LELP1Q5T871 98 aa12.26□□□□□ -0.45
HLA-A-203ENST00000376809 RNASEKQ6P5S7 137 aaKnown RBP12.26□□□□□ -0.45
HLA-A-203ENST00000376809 LINC00588Q9Y4M8 146 aa12.26□□□□□ -0.45
HLA-A-203ENST00000376809 S100A6P06703 90 aa12.26□□□□□ -0.45
HLA-A-203ENST00000376809 LINC00614P0C842 121 aa12.26□□□□□ -0.45
HLA-A-203ENST00000376809 LAGE3Q14657 143 aa12.25□□□□□ -0.45
HLA-A-203ENST00000376809 CHCHD7Q9BUK0 85 aa12.25□□□□□ -0.45
HLA-A-203ENST00000376809 AP5S1Q9NUS5 200 aa12.25□□□□□ -0.45
HLA-A-203ENST00000376809 UBE2DNLQ8IWF7 75 aa12.24□□□□□ -0.45
HLA-A-203ENST00000376809 CHCHD5Q9BSY4 110 aa12.24□□□□□ -0.45
HLA-A-203ENST00000376809 TMEM243Q9BU79 118 aa12.24□□□□□ -0.45
HLA-A-203ENST00000376809 SERF1AO75920 110 aa12.23□□□□□ -0.45
HLA-A-203ENST00000376809 ESDP10768 282 aa12.23□□□□□ -0.45
HLA-A-203ENST00000376809 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.22□□□□□ -0.45
HLA-A-203ENST00000376809 TRAV8-6A0A0B4J262 113 aa12.22□□□□□ -0.45
HLA-A-203ENST00000376809 IGKV2-29A2NJV5 120 aaPredicted RBP12.22□□□□□ -0.45
HLA-A-203ENST00000376809 LINC01546A6NGU7 62 aa12.22□□□□□ -0.45
HLA-A-203ENST00000376809 K7EMI3 77 aa12.22□□□□□ -0.45
HLA-A-203ENST00000376809 NDUFA6P56556 154 aa12.22□□□□□ -0.45
HLA-A-203ENST00000376809 LINC00310P59036 64 aa12.22□□□□□ -0.45
HLA-A-203ENST00000376809 ORMDL2Q53FV1 153 aa12.22□□□□□ -0.45
HLA-A-203ENST00000376809 WFDC10BQ8IUB3 73 aa12.22□□□□□ -0.45
HLA-A-203ENST00000376809 MRPS16Q9Y3D3 137 aaKnown RBP12.22□□□□□ -0.45
HLA-A-203ENST00000376809 GAGE6Q13070 117 aa12.22□□□□□ -0.45
HLA-A-203ENST00000376809 UBE2L6O14933 153 aa12.21□□□□□ -0.46
HLA-A-203ENST00000376809 BTF3P20290 206 aaKnown RBP12.21□□□□□ -0.46
HLA-A-203ENST00000376809 PMCHL1Q16048 86 aa12.21□□□□□ -0.46
HLA-A-203ENST00000376809 CHCHD1Q96BP2 118 aaKnown RBP12.21□□□□□ -0.46
HLA-A-203ENST00000376809 NUPR1O60356 82 aa12.2□□□□□ -0.46
HLA-A-203ENST00000376809 RPL39P62891 51 aaKnown RBP12.2□□□□□ -0.46
HLA-A-203ENST00000376809 C20orf203Q8NBC4 194 aa12.2□□□□□ -0.46
HLA-A-203ENST00000376809 C5orf52A6NGY3 159 aa12.19□□□□□ -0.46
HLA-A-203ENST00000376809 TMEM262E9PQX1 116 aa12.19□□□□□ -0.46
HLA-A-203ENST00000376809 HSBP1O75506 76 aa12.19□□□□□ -0.46
HLA-A-203ENST00000376809 C2orf66Q6UXQ4 117 aa12.19□□□□□ -0.46
HLA-A-203ENST00000376809 Q8N3U1 123 aa12.18□□□□□ -0.46
HLA-A-203ENST00000376809 TMEM18Q96B42 140 aa12.18□□□□□ -0.46
HLA-A-203ENST00000376809 UPK3BQ9BT76 320 aa12.18□□□□□ -0.46
HLA-A-203ENST00000376809 CYSLTR1Q9Y271 337 aa12.18□□□□□ -0.46
HLA-A-203ENST00000376809 A0A096LNJ9 63 aa12.17□□□□□ -0.46
HLA-A-203ENST00000376809 FAM19A2Q8N3H0 131 aa12.17□□□□□ -0.46
HLA-A-203ENST00000376809 FGF6P10767 208 aa12.16□□□□□ -0.46
HLA-A-203ENST00000376809 AKR1D1P51857 326 aa12.16□□□□□ -0.46
HLA-A-203ENST00000376809 SNRPEP62304 92 aaKnown RBP12.16□□□□□ -0.46
HLA-A-203ENST00000376809 MPV17L2Q567V2 206 aa12.16□□□□□ -0.46
HLA-A-203ENST00000376809 COA6Q5JTJ3 125 aaKnown RBP12.16□□□□□ -0.46
HLA-A-203ENST00000376809 AMMECR1LQ6DCA0 310 aa12.16□□□□□ -0.46
HLA-A-203ENST00000376809 A0A087WX48 190 aa12.15□□□□□ -0.46
HLA-A-203ENST00000376809 H7C423 109 aa12.15□□□□□ -0.46
HLA-A-203ENST00000376809 SIVA1O15304 175 aa12.15□□□□□ -0.46
HLA-A-203ENST00000376809 IGHV3-30P01768 117 aa12.15□□□□□ -0.46
HLA-A-203ENST00000376809 IGHV3-33P01772 117 aa12.15□□□□□ -0.46
HLA-A-203ENST00000376809 HBDP02042 147 aa12.15□□□□□ -0.46
HLA-A-203ENST00000376809 IGHV3-30-3P0DP02 117 aa12.15□□□□□ -0.46
HLA-A-203ENST00000376809 IGHV3-30-5P0DP03 117 aa12.15□□□□□ -0.46
HLA-A-203ENST00000376809 G0S2P27469 103 aa12.15□□□□□ -0.46
HLA-A-203ENST00000376809 LGALS9CQ6DKI2 356 aa12.15□□□□□ -0.46
HLA-A-203ENST00000376809 LINC00518Q8N0U6 118 aa12.15□□□□□ -0.46
HLA-A-203ENST00000376809 Q8N976 141 aa12.15□□□□□ -0.46
HLA-A-203ENST00000376809 TOMM6Q96B49 74 aa12.15□□□□□ -0.47
HLA-A-203ENST00000376809 Q9H8V8 135 aa12.15□□□□□ -0.47
HLA-A-203ENST00000376809 UBE2D4Q9Y2X8 147 aa12.15□□□□□ -0.47
HLA-A-203ENST00000376809 LY6G6CO95867 125 aa12.14□□□□□ -0.47
HLA-A-203ENST00000376809 RBX1P62877 108 aa12.14□□□□□ -0.47
HLA-A-203ENST00000376809 PKIAP61925 76 aa12.13□□□□□ -0.47
HLA-A-203ENST00000376809 PDZD11Q5EBL8 140 aa12.13□□□□□ -0.47
HLA-A-203ENST00000376809 DGAT2L7PQ6IED9 249 aa12.13□□□□□ -0.47
HLA-A-203ENST00000376809 LINC00476Q8WZB0 136 aa12.13□□□□□ -0.47
HLA-A-203ENST00000376809 IGLV4-60A0A075B6I1 120 aa12.12□□□□□ -0.47
HLA-A-203ENST00000376809 DNAH10OSP0CZ25 163 aa12.12□□□□□ -0.47
HLA-A-203ENST00000376809 LINC01556Q5JQF7 62 aa12.12□□□□□ -0.47
HLA-A-203ENST00000376809 MRPL52Q86TS9 123 aaKnown RBP12.12□□□□□ -0.47
HLA-A-203ENST00000376809 SMAGPQ0VAQ4 97 aa12.11□□□□□ -0.47
HLA-A-203ENST00000376809 OR5A1Q8NGJ0 315 aa12.11□□□□□ -0.47
HLA-A-203ENST00000376809 TMEM101Q96IK0 257 aa12.11□□□□□ -0.47
HLA-A-203ENST00000376809 SCGB3A1Q96QR1 104 aa12.11□□□□□ -0.47
HLA-A-203ENST00000376809 VPS13DQ5THJ4 4388 aa12.11□□□□□ -0.47
HLA-A-203ENST00000376809 A0A1B0GUV1 79 aa12.11□□□□□ -0.47
HLA-A-203ENST00000376809 SMIM6P0DI80 62 aa12.11□□□□□ -0.47
HLA-A-203ENST00000376809 ZNF25P17030 456 aaPredicted RBP12.11□□□□□ -0.47
HLA-A-203ENST00000376809 OPRPNQ99935 248 aaPredicted RBP12.11□□□□□ -0.47
HLA-A-203ENST00000376809 TIMM21Q9BVV7 248 aa12.11□□□□□ -0.47
HLA-A-203ENST00000376809 SPANXA1Q9NS26 97 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms