RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 RNASE1P07998 156 aaKnown RBP11.22□□□□□ -0.61
CCHCR1-201ENST00000376266 RPL13AP40429 203 aaKnown RBP11.22□□□□□ -0.61
CCHCR1-201ENST00000376266 MUSTN1Q8IVN3 82 aa11.22□□□□□ -0.61
CCHCR1-201ENST00000376266 UBE2WQ96B02 151 aa11.22□□□□□ -0.61
CCHCR1-201ENST00000376266 C16orf92Q96LL3 132 aa11.22□□□□□ -0.61
CCHCR1-201ENST00000376266 A0A0B4J2C4 111 aa11.22□□□□□ -0.61
CCHCR1-201ENST00000376266 CLPSL1A2RUU4 121 aa11.22□□□□□ -0.61
CCHCR1-201ENST00000376266 TMEM141Q96I45 108 aa11.22□□□□□ -0.61
CCHCR1-201ENST00000376266 TRBV10-2A0A0K0K1G8 114 aa11.21□□□□□ -0.62
CCHCR1-201ENST00000376266 METTL26Q96S19 204 aa11.21□□□□□ -0.62
CCHCR1-201ENST00000376266 TRAV21A0A0B4J279 112 aa11.2□□□□□ -0.62
CCHCR1-201ENST00000376266 LGALS9O00182 355 aa11.2□□□□□ -0.62
CCHCR1-201ENST00000376266 CLEC19AQ6UXS0 136 aa11.2□□□□□ -0.62
CCHCR1-201ENST00000376266 LINC00527Q9UJ94 153 aa11.2□□□□□ -0.62
CCHCR1-201ENST00000376266 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.2□□□□□ -0.62
CCHCR1-201ENST00000376266 ECSCRQ19T08 205 aa11.19□□□□□ -0.62
CCHCR1-201ENST00000376266 C2orf82Q6UX34 121 aa11.19□□□□□ -0.62
CCHCR1-201ENST00000376266 C2CD3Q4AC94 2353 aa11.19□□□□□ -0.62
CCHCR1-201ENST00000376266 ATP6V0E1O15342 81 aa11.19□□□□□ -0.62
CCHCR1-201ENST00000376266 IGHG2P01859 326 aa11.19□□□□□ -0.62
CCHCR1-201ENST00000376266 ZNF876PQ49A33 203 aa11.19□□□□□ -0.62
CCHCR1-201ENST00000376266 ZNF702PQ9H963 129 aa11.19□□□□□ -0.62
CCHCR1-201ENST00000376266 LENEPQ9Y5L5 61 aa11.19□□□□□ -0.62
CCHCR1-201ENST00000376266 TIMM17AQ99595 171 aa11.18□□□□□ -0.62
CCHCR1-201ENST00000376266 MDFICQ9P1T7 246 aa11.18□□□□□ -0.62
CCHCR1-201ENST00000376266 TNFRSF18Q9Y5U5 241 aa11.18□□□□□ -0.62
CCHCR1-201ENST00000376266 IGHV3-64A0A075B6Q5 118 aa11.18□□□□□ -0.62
CCHCR1-201ENST00000376266 GNRH2O43555 120 aa11.18□□□□□ -0.62
CCHCR1-201ENST00000376266 ZNF56Q15929 161 aa11.18□□□□□ -0.62
CCHCR1-201ENST00000376266 Q6ZSV7 163 aa11.18□□□□□ -0.62
CCHCR1-201ENST00000376266 ZFAND2AQ8N6M9 145 aa11.18□□□□□ -0.62
CCHCR1-201ENST00000376266 LEPROTO15243 131 aa11.17□□□□□ -0.62
CCHCR1-201ENST00000376266 BRI3O95415 125 aa11.17□□□□□ -0.62
CCHCR1-201ENST00000376266 CHCHD5Q9BSY4 110 aa11.17□□□□□ -0.62
CCHCR1-201ENST00000376266 G3V318 75 aa11.17□□□□□ -0.62
CCHCR1-201ENST00000376266 VCYO14598 125 aa11.17□□□□□ -0.62
CCHCR1-201ENST00000376266 TRIAP1O43715 76 aa11.17□□□□□ -0.62
CCHCR1-201ENST00000376266 RNASE4P34096 147 aaKnown RBP11.17□□□□□ -0.62
CCHCR1-201ENST00000376266 LINC00477Q96M19 166 aa11.17□□□□□ -0.62
CCHCR1-201ENST00000376266 LINC01600Q96MT4 127 aa11.17□□□□□ -0.62
CCHCR1-201ENST00000376266 TRBV30A0A0K0K1B3 111 aa11.16□□□□□ -0.62
CCHCR1-201ENST00000376266 POLR2KP53803 58 aaKnown RBP11.16□□□□□ -0.62
CCHCR1-201ENST00000376266 C3orf56Q8N813 242 aa11.16□□□□□ -0.62
CCHCR1-201ENST00000376266 FAM110DQ8TAY7 271 aaPredicted RBP11.16□□□□□ -0.62
CCHCR1-201ENST00000376266 C20orf173Q96LM9 149 aa11.16□□□□□ -0.62
CCHCR1-201ENST00000376266 MRPL23Q16540 153 aaKnown RBP11.15□□□□□ -0.62
CCHCR1-201ENST00000376266 CCDC140Q96MF4 163 aa11.15□□□□□ -0.62
CCHCR1-201ENST00000376266 IGHV4OR15-8A0A075B7B6 117 aa11.15□□□□□ -0.62
CCHCR1-201ENST00000376266 A0A087WW49 117 aa11.15□□□□□ -0.62
CCHCR1-201ENST00000376266 TMEM223A0PJW6 202 aa11.15□□□□□ -0.62
CCHCR1-201ENST00000376266 F5H697 171 aa11.15□□□□□ -0.62
CCHCR1-201ENST00000376266 M0R2P5 195 aa11.15□□□□□ -0.62
CCHCR1-201ENST00000376266 MED14OSP0DP75 135 aa11.15□□□□□ -0.62
CCHCR1-201ENST00000376266 Q8N2B8 174 aa11.15□□□□□ -0.62
CCHCR1-201ENST00000376266 ATRQ13535 2644 aa11.14□□□□□ -0.63
CCHCR1-201ENST00000376266 RNASE3P12724 160 aaKnown RBP11.14□□□□□ -0.63
CCHCR1-201ENST00000376266 MUC4Q99102 2169 aa11.14□□□□□ -0.63
CCHCR1-201ENST00000376266 H7C423 109 aa11.14□□□□□ -0.63
CCHCR1-201ENST00000376266 DEFB1P60022 68 aa11.14□□□□□ -0.63
CCHCR1-201ENST00000376266 PRIMA1Q86XR5 153 aa11.14□□□□□ -0.63
CCHCR1-201ENST00000376266 DUX3Q96PT4 197 aa11.14□□□□□ -0.63
CCHCR1-201ENST00000376266 OPRPNQ99935 248 aaPredicted RBP11.14□□□□□ -0.63
CCHCR1-201ENST00000376266 TMEM126AQ9H061 195 aa11.14□□□□□ -0.63
CCHCR1-201ENST00000376266 TRAV41A0A0B4J266 112 aa11.13□□□□□ -0.63
CCHCR1-201ENST00000376266 SDHAF1A6NFY7 115 aa11.13□□□□□ -0.63
CCHCR1-201ENST00000376266 LINC00315P59091 139 aa11.13□□□□□ -0.63
CCHCR1-201ENST00000376266 SUMO4Q6EEV6 95 aa11.13□□□□□ -0.63
CCHCR1-201ENST00000376266 POM121L12Q8N7R1 296 aa11.13□□□□□ -0.63
CCHCR1-201ENST00000376266 EEF1AKMT3Q96AZ1 226 aa11.13□□□□□ -0.63
CCHCR1-201ENST00000376266 JPT2Q9H910 190 aa11.13□□□□□ -0.63
CCHCR1-201ENST00000376266 KIF25-AS1Q9Y6Z4 181 aa11.13□□□□□ -0.63
CCHCR1-201ENST00000376266 PRSS2P07478 247 aa11.12□□□□□ -0.63
CCHCR1-201ENST00000376266 C10orf99Q6UWK7 81 aa11.12□□□□□ -0.63
CCHCR1-201ENST00000376266 LINC01006Q8NI28 216 aa11.12□□□□□ -0.63
CCHCR1-201ENST00000376266 ZNF256Q9Y2P7 627 aaPredicted RBP11.12□□□□□ -0.63
CCHCR1-201ENST00000376266 A0A087WWL8 130 aa11.12□□□□□ -0.63
CCHCR1-201ENST00000376266 C19orf54Q5BKX5 351 aa11.12□□□□□ -0.63
CCHCR1-201ENST00000376266 U3KQE9 123 aa11.12□□□□□ -0.63
CCHCR1-201ENST00000376266 H3BT86 120 aa11.11□□□□□ -0.63
CCHCR1-201ENST00000376266 OVOL1O14753 267 aa11.11□□□□□ -0.63
CCHCR1-201ENST00000376266 COX6CP09669 75 aa11.11□□□□□ -0.63
CCHCR1-201ENST00000376266 ICOSQ9Y6W8 199 aa11.11□□□□□ -0.63
CCHCR1-201ENST00000376266 A0A0J9YXY3 114 aa11.11□□□□□ -0.63
CCHCR1-201ENST00000376266 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.11□□□□□ -0.63
CCHCR1-201ENST00000376266 ZNF22P17026 224 aaPredicted RBP11.1□□□□□ -0.63
CCHCR1-201ENST00000376266 C16orf95Q9H693 158 aa11.1□□□□□ -0.63
CCHCR1-201ENST00000376266 NDUFA7O95182 113 aa11.1□□□□□ -0.63
CCHCR1-201ENST00000376266 LINC01587Q99440 93 aa11.1□□□□□ -0.63
CCHCR1-201ENST00000376266 PPDPFQ9H3Y8 114 aa11.1□□□□□ -0.63
CCHCR1-201ENST00000376266 FBN1P35555 2871 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-201ENST00000376266 FAM240AA0A1B0GVK7 77 aa11.09□□□□□ -0.63
CCHCR1-201ENST00000376266 ADARB2-AS1A8MUL3 147 aa11.09□□□□□ -0.63
CCHCR1-201ENST00000376266 CFHR3Q02985 330 aa11.09□□□□□ -0.63
CCHCR1-201ENST00000376266 TRBV7-1A0A0A6YYK4 115 aa11.09□□□□□ -0.63
CCHCR1-201ENST00000376266 CLEC2BQ92478 149 aa11.09□□□□□ -0.63
CCHCR1-201ENST00000376266 ZNF580Q9UK33 172 aa11.09□□□□□ -0.63
CCHCR1-201ENST00000376266 A0A0J9YX75 114 aa11.08□□□□□ -0.64
CCHCR1-201ENST00000376266 A0A0J9YXV3 536 aa11.08□□□□□ -0.64
CCHCR1-201ENST00000376266 TRBV27A0A0K0K1C4 114 aa11.08□□□□□ -0.64
CCHCR1-201ENST00000376266 F6UB75 175 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms