RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 EDA2RQ9HAV5 297 aa9.12□□□□□ -0.95
C9orf3-203ENST00000375315 LEPROTO15243 131 aa9.11□□□□□ -0.95
C9orf3-203ENST00000375315 ZNF22P17026 224 aaPredicted RBP9.11□□□□□ -0.95
C9orf3-203ENST00000375315 KLK5Q9Y337 293 aaPredicted RBP9.11□□□□□ -0.95
C9orf3-203ENST00000375315 ICOSQ9Y6W8 199 aa9.11□□□□□ -0.95
C9orf3-203ENST00000375315 TSHBP01222 138 aa9.11□□□□□ -0.95
C9orf3-203ENST00000375315 IGIPA6NJ69 53 aa9.11□□□□□ -0.95
C9orf3-203ENST00000375315 HIST2H2BDQ6DRA6 164 aa9.11□□□□□ -0.95
C9orf3-203ENST00000375315 LINC00643Q86TS7 51 aa9.11□□□□□ -0.95
C9orf3-203ENST00000375315 RNF182Q8N6D2 247 aa9.11□□□□□ -0.95
C9orf3-203ENST00000375315 COX7CP15954 63 aa9.1□□□□□ -0.95
C9orf3-203ENST00000375315 MINOS1Q5TGZ0 78 aa9.1□□□□□ -0.95
C9orf3-203ENST00000375315 MINOS1-NBL1R4GNA1 71 aa9.1□□□□□ -0.95
C9orf3-203ENST00000375315 HIVEP2P31629 2446 aa9.1□□□□□ -0.95
C9orf3-203ENST00000375315 TMEM223A0PJW6 202 aa9.1□□□□□ -0.95
C9orf3-203ENST00000375315 BLCAPP62952 87 aa9.1□□□□□ -0.95
C9orf3-203ENST00000375315 TIMM17AQ99595 171 aa9.1□□□□□ -0.95
C9orf3-203ENST00000375315 IGHV3OR16-13A0A075B7E8 117 aa9.09□□□□□ -0.95
C9orf3-203ENST00000375315 IGHV3-74A0A0B4J1X5 117 aa9.09□□□□□ -0.95
C9orf3-203ENST00000375315 ATP6V0E1O15342 81 aa9.09□□□□□ -0.95
C9orf3-203ENST00000375315 Q8N9W7 124 aa9.09□□□□□ -0.95
C9orf3-203ENST00000375315 ZNRF2Q8NHG8 242 aa9.09□□□□□ -0.95
C9orf3-203ENST00000375315 S100A4P26447 101 aaKnown RBP9.09□□□□□ -0.95
C9orf3-203ENST00000375315 ZNF876PQ49A33 203 aa9.09□□□□□ -0.95
C9orf3-203ENST00000375315 LINC01356Q8N9X3 169 aa9.09□□□□□ -0.95
C9orf3-203ENST00000375315 IGLV11-55A0A075B6I3 123 aa9.08□□□□□ -0.96
C9orf3-203ENST00000375315 IGHV7-81A0A0B4J1V7 117 aa9.08□□□□□ -0.96
C9orf3-203ENST00000375315 SDHAF1A6NFY7 115 aa9.08□□□□□ -0.96
C9orf3-203ENST00000375315 DEFB112Q30KQ8 113 aa9.08□□□□□ -0.96
C9orf3-203ENST00000375315 F8W735 103 aaPredicted RBP9.08□□□□□ -0.96
C9orf3-203ENST00000375315 LST1O00453 97 aa9.08□□□□□ -0.96
C9orf3-203ENST00000375315 IGHV4-59P01825 116 aa9.08□□□□□ -0.96
C9orf3-203ENST00000375315 CRYGAP11844 174 aa9.08□□□□□ -0.96
C9orf3-203ENST00000375315 FANCD2OSQ96PS1 177 aa9.08□□□□□ -0.96
C9orf3-203ENST00000375315 PHLDA3Q9Y5J5 127 aa9.08□□□□□ -0.96
C9orf3-203ENST00000375315 IGHV3-49A0A0A0MS15 119 aa9.07□□□□□ -0.96
C9orf3-203ENST00000375315 NOTCH3Q9UM47 2321 aa9.07□□□□□ -0.96
C9orf3-203ENST00000375315 A0A0J9YX75 114 aa9.07□□□□□ -0.96
C9orf3-203ENST00000375315 IGHV3-11P01762 117 aa9.07□□□□□ -0.96
C9orf3-203ENST00000375315 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.07□□□□□ -0.96
C9orf3-203ENST00000375315 CLEC2BQ92478 149 aa9.07□□□□□ -0.96
C9orf3-203ENST00000375315 PRSS2P07478 247 aa9.06□□□□□ -0.96
C9orf3-203ENST00000375315 CXCL5P42830 114 aa9.06□□□□□ -0.96
C9orf3-203ENST00000375315 TRACP01848 142 aa9.06□□□□□ -0.96
C9orf3-203ENST00000375315 RPL39P62891 51 aaKnown RBP9.06□□□□□ -0.96
C9orf3-203ENST00000375315 TRAV8-3A0A0A6YYJ7 113 aa9.05□□□□□ -0.96
C9orf3-203ENST00000375315 IGHV3-66A0A0C4DH42 116 aa9.05□□□□□ -0.96
C9orf3-203ENST00000375315 IGHV4-31P0DP07 118 aa9.05□□□□□ -0.96
C9orf3-203ENST00000375315 DSCR9P59020 149 aa9.05□□□□□ -0.96
C9orf3-203ENST00000375315 GPHB5Q86YW7 130 aa9.05□□□□□ -0.96
C9orf3-203ENST00000375315 MRPL53Q96EL3 112 aaKnown RBP9.05□□□□□ -0.96
C9orf3-203ENST00000375315 SORL1Q92673 2214 aa9.05□□□□□ -0.96
C9orf3-203ENST00000375315 FN1P02751 2386 aaKnown RBP9.05□□□□□ -0.96
C9orf3-203ENST00000375315 A0A0J9YXY3 114 aa9.05□□□□□ -0.96
C9orf3-203ENST00000375315 CTSGP08311 255 aa9.05□□□□□ -0.96
C9orf3-203ENST00000375315 C9orf47Q6ZRZ4 202 aa9.05□□□□□ -0.96
C9orf3-203ENST00000375315 NPBQ8NG41 125 aa9.05□□□□□ -0.96
C9orf3-203ENST00000375315 SMR3AQ99954 134 aa9.05□□□□□ -0.96
C9orf3-203ENST00000375315 PDZD2O15018 2839 aa9.05□□□□□ -0.96
C9orf3-203ENST00000375315 TEP1Q99973 2627 aaKnown RBP9.05□□□□□ -0.96
C9orf3-203ENST00000375315 ATOX1O00244 68 aa9.05□□□□□ -0.96
C9orf3-203ENST00000375315 VCYO14598 125 aa9.05□□□□□ -0.96
C9orf3-203ENST00000375315 IGHV3-64A0A075B6Q5 118 aa9.04□□□□□ -0.96
C9orf3-203ENST00000375315 F5H768 121 aa9.04□□□□□ -0.96
C9orf3-203ENST00000375315 OVOL1O14753 267 aa9.03□□□□□ -0.96
C9orf3-203ENST00000375315 SPRY2O43597 315 aa9.03□□□□□ -0.96
C9orf3-203ENST00000375315 BUB3O43684 328 aa9.03□□□□□ -0.96
C9orf3-203ENST00000375315 C15orf32Q32M92 178 aa9.03□□□□□ -0.96
C9orf3-203ENST00000375315 C10orf99Q6UWK7 81 aa9.03□□□□□ -0.96
C9orf3-203ENST00000375315 CLEC19AQ6UXS0 136 aa9.03□□□□□ -0.96
C9orf3-203ENST00000375315 Q8N6K4 173 aa9.03□□□□□ -0.96
C9orf3-203ENST00000375315 EEF1AKMT3Q96AZ1 226 aa9.03□□□□□ -0.96
C9orf3-203ENST00000375315 SMCR5Q8TEV8 140 aa9.03□□□□□ -0.96
C9orf3-203ENST00000375315 hADV29S1A0JD25 119 aa9.02□□□□□ -0.96
C9orf3-203ENST00000375315 I3L3M4 83 aa9.02□□□□□ -0.96
C9orf3-203ENST00000375315 TMEM258P61165 79 aa9.02□□□□□ -0.96
C9orf3-203ENST00000375315 C5orf38Q86SI9 138 aa9.02□□□□□ -0.96
C9orf3-203ENST00000375315 C5orf56Q8N8D9 126 aa9.02□□□□□ -0.96
C9orf3-203ENST00000375315 LENEPQ9Y5L5 61 aa9.02□□□□□ -0.96
C9orf3-203ENST00000375315 CR1P17927 2039 aa9.02□□□□□ -0.97
C9orf3-203ENST00000375315 A0A096LNT2 108 aa9.02□□□□□ -0.97
C9orf3-203ENST00000375315 TRAV21A0A0B4J279 112 aa9.02□□□□□ -0.97
C9orf3-203ENST00000375315 MED14OSP0DP75 135 aa9.02□□□□□ -0.97
C9orf3-203ENST00000375315 POLR2KP53803 58 aaKnown RBP9.02□□□□□ -0.97
C9orf3-203ENST00000375315 C2orf48Q96LS8 159 aa9.02□□□□□ -0.97
C9orf3-203ENST00000375315 IGHV4OR15-8A0A075B7B6 117 aa9.02□□□□□ -0.97
C9orf3-203ENST00000375315 A0A087WW49 117 aa9.02□□□□□ -0.97
C9orf3-203ENST00000375315 TRAV41A0A0B4J266 112 aa9.02□□□□□ -0.97
C9orf3-203ENST00000375315 MOB4Q9Y3A3 225 aa9.02□□□□□ -0.97
C9orf3-203ENST00000375315 IGKV3-7A0A075B6H7 116 aa9.01□□□□□ -0.97
C9orf3-203ENST00000375315 DEFB104AQ8WTQ1 72 aa9.01□□□□□ -0.97
C9orf3-203ENST00000375315 ZFAND3Q9H8U3 227 aa9.01□□□□□ -0.97
C9orf3-203ENST00000375315 PRR9Q5T870 116 aa9.01□□□□□ -0.97
C9orf3-203ENST00000375315 C11orf44Q8N8P7 122 aa9.01□□□□□ -0.97
C9orf3-203ENST00000375315 SETXQ7Z333 2677 aaKnown RBP9.01□□□□□ -0.97
C9orf3-203ENST00000375315 DCANP1Q8TF63 244 aa9□□□□□ -0.97
C9orf3-203ENST00000375315 DPH3Q96FX2 82 aa9□□□□□ -0.97
C9orf3-203ENST00000375315 PEMTQ9UBM1 199 aa9□□□□□ -0.97
C9orf3-203ENST00000375315 KRTAP1-3Q8IUG1 177 aa9□□□□□ -0.97
C9orf3-203ENST00000375315 MRAPQ8TCY5 172 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms