RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 LRRC75A-AS1Q8N1F1 130 aa10.85□□□□□ -0.67
TRAF1-201ENST00000373887 TP53TG3Q9ULZ0 132 aa10.85□□□□□ -0.67
TRAF1-201ENST00000373887 IGKV1D-37A0A075B6S9 117 aa10.85□□□□□ -0.67
TRAF1-201ENST00000373887 MIAQ16674 131 aa10.85□□□□□ -0.67
TRAF1-201ENST00000373887 NDUFV3P56181 108 aaKnown RBP10.85□□□□□ -0.67
TRAF1-201ENST00000373887 FAM236DA0A1B0GTK5 79 aa10.84□□□□□ -0.67
TRAF1-201ENST00000373887 FAM236CP0DP71 79 aa10.84□□□□□ -0.67
TRAF1-201ENST00000373887 C10orf99Q6UWK7 81 aa10.84□□□□□ -0.67
TRAF1-201ENST00000373887 Q6YL49 198 aa10.84□□□□□ -0.67
TRAF1-201ENST00000373887 LINC00482Q8N8I6 264 aa10.84□□□□□ -0.67
TRAF1-201ENST00000373887 TRBV6-1A0A0K0K1D8 114 aa10.84□□□□□ -0.67
TRAF1-201ENST00000373887 TEX49A0A1B0GTD5 131 aa10.84□□□□□ -0.67
TRAF1-201ENST00000373887 PCDH15Q96QU1 1955 aa10.84□□□□□ -0.67
TRAF1-201ENST00000373887 FAM167A-AS1Q96KT0 104 aa10.84□□□□□ -0.67
TRAF1-201ENST00000373887 C11orf45Q8TAV5 145 aa10.84□□□□□ -0.67
TRAF1-201ENST00000373887 SMR3AQ99954 134 aa10.84□□□□□ -0.67
TRAF1-201ENST00000373887 TNFRSF13BO14836 293 aaPredicted RBP10.83□□□□□ -0.68
TRAF1-201ENST00000373887 LINC00643Q86TS7 51 aa10.83□□□□□ -0.68
TRAF1-201ENST00000373887 MAP6D1Q9H9H5 199 aa10.83□□□□□ -0.68
TRAF1-201ENST00000373887 PLA2G2AP14555 144 aa10.83□□□□□ -0.68
TRAF1-201ENST00000373887 IGLV2-14P01704 120 aa10.83□□□□□ -0.68
TRAF1-201ENST00000373887 EP400Q96L91 3159 aa10.83□□□□□ -0.68
TRAF1-201ENST00000373887 FAM19A5Q7Z5A7 132 aaPredicted RBP10.82□□□□□ -0.68
TRAF1-201ENST00000373887 PLA2G2EQ9NZK7 142 aa10.82□□□□□ -0.68
TRAF1-201ENST00000373887 IGLC6P0CF74 106 aa10.82□□□□□ -0.68
TRAF1-201ENST00000373887 HRCT1Q6UXD1 115 aa10.82□□□□□ -0.68
TRAF1-201ENST00000373887 PRO0255Q9UI72 69 aa10.82□□□□□ -0.68
TRAF1-201ENST00000373887 REG3AQ06141 175 aa10.82□□□□□ -0.68
TRAF1-201ENST00000373887 CUL9Q8IWT3 2517 aa10.82□□□□□ -0.68
TRAF1-201ENST00000373887 MT-ATP8P03928 68 aa10.82□□□□□ -0.68
TRAF1-201ENST00000373887 CTRLP40313 264 aa10.82□□□□□ -0.68
TRAF1-201ENST00000373887 COA6Q5JTJ3 125 aaKnown RBP10.82□□□□□ -0.68
TRAF1-201ENST00000373887 ZFAND2AQ8N6M9 145 aa10.82□□□□□ -0.68
TRAF1-201ENST00000373887 C20orf203Q8NBC4 194 aa10.81□□□□□ -0.68
TRAF1-201ENST00000373887 DCANP1Q8TF63 244 aa10.81□□□□□ -0.68
TRAF1-201ENST00000373887 PDE6GP18545 87 aa10.81□□□□□ -0.68
TRAF1-201ENST00000373887 A0A0J9YXY3 114 aa10.81□□□□□ -0.68
TRAF1-201ENST00000373887 CEP192Q8TEP8 1941 aa10.8□□□□□ -0.68
TRAF1-201ENST00000373887 FAM240AA0A1B0GVK7 77 aa10.8□□□□□ -0.68
TRAF1-201ENST00000373887 MED14OSP0DP75 135 aa10.8□□□□□ -0.68
TRAF1-201ENST00000373887 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.8□□□□□ -0.68
TRAF1-201ENST00000373887 CCDC140Q96MF4 163 aa10.8□□□□□ -0.68
TRAF1-201ENST00000373887 CRYGDP07320 174 aa10.8□□□□□ -0.68
TRAF1-201ENST00000373887 K7EMT4 169 aa10.79□□□□□ -0.68
TRAF1-201ENST00000373887 PIK3CD-AS1Q5SR53 167 aa10.79□□□□□ -0.68
TRAF1-201ENST00000373887 NDUFC2-KCTD14E9PQ53 114 aa10.79□□□□□ -0.68
TRAF1-201ENST00000373887 IGHV4-30-4P0DP06 118 aa10.79□□□□□ -0.68
TRAF1-201ENST00000373887 UFSP1Q6NVU6 142 aa10.79□□□□□ -0.68
TRAF1-201ENST00000373887 Q6ZTI0 123 aa10.79□□□□□ -0.68
TRAF1-201ENST00000373887 FREM1Q5H8C1 2179 aa10.79□□□□□ -0.68
TRAF1-201ENST00000373887 SPINK6Q6UWN8 80 aa10.79□□□□□ -0.68
TRAF1-201ENST00000373887 SPATA12Q7Z6I5 190 aa10.79□□□□□ -0.68
TRAF1-201ENST00000373887 C3orf84H3BNL1 204 aa10.78□□□□□ -0.68
TRAF1-201ENST00000373887 CDSNQ15517 529 aa10.78□□□□□ -0.68
TRAF1-201ENST00000373887 CHCHD10Q8WYQ3 142 aaPredicted RBP10.78□□□□□ -0.68
TRAF1-201ENST00000373887 HIVEP2P31629 2446 aa10.78□□□□□ -0.68
TRAF1-201ENST00000373887 PRR15LQ9BU68 103 aa10.78□□□□□ -0.68
TRAF1-201ENST00000373887 ODF3BA8MYP8 253 aa10.78□□□□□ -0.68
TRAF1-201ENST00000373887 C14orf177Q52M58 125 aa10.78□□□□□ -0.68
TRAF1-201ENST00000373887 Q6ZSR3 168 aa10.78□□□□□ -0.68
TRAF1-201ENST00000373887 A0A0J9YX75 114 aa10.77□□□□□ -0.68
TRAF1-201ENST00000373887 PRR4Q16378 134 aa10.77□□□□□ -0.68
TRAF1-201ENST00000373887 Q6ZSV7 163 aa10.77□□□□□ -0.68
TRAF1-201ENST00000373887 C1orf158Q8N1D5 194 aa10.77□□□□□ -0.68
TRAF1-201ENST00000373887 SNURFQ9Y675 71 aa10.77□□□□□ -0.68
TRAF1-201ENST00000373887 INSL3P51460 131 aa10.77□□□□□ -0.68
TRAF1-201ENST00000373887 LINC00467Q9BRT7 94 aa10.77□□□□□ -0.68
TRAF1-201ENST00000373887 PPDPFQ9H3Y8 114 aa10.77□□□□□ -0.69
TRAF1-201ENST00000373887 TRBV10-1A0A0K0K1A3 114 aa10.76□□□□□ -0.69
TRAF1-201ENST00000373887 NOTCH2Q04721 2471 aa10.76□□□□□ -0.69
TRAF1-201ENST00000373887 XAGE1AQ9HD64 81 aa10.76□□□□□ -0.69
TRAF1-201ENST00000373887 C1orf229Q6ZS94 237 aaPredicted RBP10.75□□□□□ -0.69
TRAF1-201ENST00000373887 PTPN13Q12923 2485 aa10.75□□□□□ -0.69
TRAF1-201ENST00000373887 ZNF80P51504 273 aaPredicted RBP10.75□□□□□ -0.69
TRAF1-201ENST00000373887 TMEM89A2RUT3 159 aa10.75□□□□□ -0.69
TRAF1-201ENST00000373887 FAM222AQ5U5X8 452 aa10.74□□□□□ -0.69
TRAF1-201ENST00000373887 C18orf65Q6ZTR6 163 aa10.74□□□□□ -0.69
TRAF1-201ENST00000373887 TP73-AS1Q9UF72 201 aa10.74□□□□□ -0.69
TRAF1-201ENST00000373887 UQCRQO14949 82 aa10.74□□□□□ -0.69
TRAF1-201ENST00000373887 WFDC13Q8IUB5 93 aa10.74□□□□□ -0.69
TRAF1-201ENST00000373887 A6NED7 52 aa10.74□□□□□ -0.69
TRAF1-201ENST00000373887 SHISA2Q6UWI4 295 aa10.73□□□□□ -0.69
TRAF1-201ENST00000373887 M0R2N4 97 aa10.73□□□□□ -0.69
TRAF1-201ENST00000373887 KIR2DL5BQ8NHK3 375 aa10.73□□□□□ -0.69
TRAF1-201ENST00000373887 IGKV2-28A0A075B6P5 120 aa10.73□□□□□ -0.69
TRAF1-201ENST00000373887 IGKV2D-28P01615 120 aa10.73□□□□□ -0.69
TRAF1-201ENST00000373887 C11orf71Q6IPW1 123 aa10.73□□□□□ -0.69
TRAF1-201ENST00000373887 KRTAP10-9P60411 292 aa10.72□□□□□ -0.69
TRAF1-201ENST00000373887 V9GYY9 64 aa10.72□□□□□ -0.69
TRAF1-201ENST00000373887 NUP210LQ5VU65 1888 aa10.72□□□□□ -0.69
TRAF1-201ENST00000373887 IGLV2-18A0A075B6J9 118 aa10.72□□□□□ -0.69
TRAF1-201ENST00000373887 DEFB131BA0A096LNP1 70 aa10.72□□□□□ -0.69
TRAF1-201ENST00000373887 DSCAMO60469 2012 aa10.71□□□□□ -0.69
TRAF1-201ENST00000373887 CCKP06307 115 aa10.71□□□□□ -0.69
TRAF1-201ENST00000373887 CDKN2A-AS1Q9UH64 79 aa10.71□□□□□ -0.69
TRAF1-201ENST00000373887 C19orf71A6NCJ1 209 aa10.71□□□□□ -0.69
TRAF1-201ENST00000373887 HILS1P60008 231 aa10.71□□□□□ -0.69
TRAF1-201ENST00000373887 SPG11Q96JI7 2443 aa10.71□□□□□ -0.7
TRAF1-201ENST00000373887 DEFB114Q30KQ6 69 aa10.71□□□□□ -0.7
TRAF1-201ENST00000373887 UBE2D1P51668 147 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms