RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 TRBV6-1A0A0K0K1D8 114 aa7.37□□□□□ -1.23
COL4A6-202ENST00000372216 IGLV2-8P01709 118 aa7.37□□□□□ -1.23
COL4A6-202ENST00000372216 TTTY13Q9BZ97 58 aa7.37□□□□□ -1.23
COL4A6-202ENST00000372216 PTPRSQ13332 1948 aa7.37□□□□□ -1.23
COL4A6-202ENST00000372216 ALPK3Q96L96 1907 aa7.37□□□□□ -1.23
COL4A6-202ENST00000372216 CTRLP40313 264 aa7.37□□□□□ -1.23
COL4A6-202ENST00000372216 NANOS2P60321 138 aaKnown RBP7.37□□□□□ -1.23
COL4A6-202ENST00000372216 UBE2D2P62837 147 aa7.37□□□□□ -1.23
COL4A6-202ENST00000372216 ZNF702PQ9H963 129 aa7.37□□□□□ -1.23
COL4A6-202ENST00000372216 PCDH15Q96QU1 1955 aa7.37□□□□□ -1.23
COL4A6-202ENST00000372216 K7EP13 123 aa7.37□□□□□ -1.23
COL4A6-202ENST00000372216 C18orf65Q6ZTR6 163 aa7.37□□□□□ -1.23
COL4A6-202ENST00000372216 C20orf173Q96LM9 149 aa7.37□□□□□ -1.23
COL4A6-202ENST00000372216 XAGE1AQ9HD64 81 aa7.37□□□□□ -1.23
COL4A6-202ENST00000372216 CRYGBP07316 175 aa7.36□□□□□ -1.23
COL4A6-202ENST00000372216 IGLV2-11P01706 119 aa7.36□□□□□ -1.23
COL4A6-202ENST00000372216 P0C879 139 aa7.36□□□□□ -1.23
COL4A6-202ENST00000372216 Q6ZPA2 131 aa7.36□□□□□ -1.23
COL4A6-202ENST00000372216 CHCHD10Q8WYQ3 142 aaPredicted RBP7.36□□□□□ -1.23
COL4A6-202ENST00000372216 DOPEY2Q9Y3R5 2298 aa7.36□□□□□ -1.23
COL4A6-202ENST00000372216 CDSNQ15517 529 aa7.36□□□□□ -1.23
COL4A6-202ENST00000372216 BRWD1-AS2P59051 145 aa7.36□□□□□ -1.23
COL4A6-202ENST00000372216 LYRM9A8MSI8 78 aa7.35□□□□□ -1.23
COL4A6-202ENST00000372216 CACNA1HO95180 2353 aa7.35□□□□□ -1.23
COL4A6-202ENST00000372216 K7EQG2 157 aa7.35□□□□□ -1.23
COL4A6-202ENST00000372216 OXLD1Q5BKU9 147 aa7.35□□□□□ -1.23
COL4A6-202ENST00000372216 CRIP3Q6Q6R5 217 aa7.35□□□□□ -1.23
COL4A6-202ENST00000372216 ODF3Q96PU9 254 aa7.35□□□□□ -1.23
COL4A6-202ENST00000372216 C11orf1Q9H5F2 150 aa7.35□□□□□ -1.23
COL4A6-202ENST00000372216 TRAV23DV6A0A075B6W5 121 aa7.34□□□□□ -1.23
COL4A6-202ENST00000372216 SMIM9A6NGZ8 99 aa7.34□□□□□ -1.23
COL4A6-202ENST00000372216 USP17L23D6RBM5 183 aa7.34□□□□□ -1.23
COL4A6-202ENST00000372216 EBI3Q14213 229 aa7.34□□□□□ -1.23
COL4A6-202ENST00000372216 PSMG3-AS1Q96PY0 264 aa7.34□□□□□ -1.23
COL4A6-202ENST00000372216 A0A0B4J2C4 111 aa7.34□□□□□ -1.23
COL4A6-202ENST00000372216 ZNF80P51504 273 aaPredicted RBP7.34□□□□□ -1.23
COL4A6-202ENST00000372216 C3orf84H3BNL1 204 aa7.34□□□□□ -1.23
COL4A6-202ENST00000372216 CXCL5P42830 114 aa7.34□□□□□ -1.23
COL4A6-202ENST00000372216 C3orf22Q8N5N4 141 aa7.34□□□□□ -1.23
COL4A6-202ENST00000372216 KIR2DL5BQ8NHK3 375 aa7.34□□□□□ -1.23
COL4A6-202ENST00000372216 NBASA2RRP1 2371 aa7.34□□□□□ -1.24
COL4A6-202ENST00000372216 PRM2P04554 102 aa7.33□□□□□ -1.24
COL4A6-202ENST00000372216 PROK1P58294 105 aa7.33□□□□□ -1.24
COL4A6-202ENST00000372216 EIF4EBP1Q13541 118 aaPredicted RBP7.33□□□□□ -1.24
COL4A6-202ENST00000372216 FAM236AA0A1B0GUQ0 79 aa7.33□□□□□ -1.24
COL4A6-202ENST00000372216 FAM236BA0A1B0GV22 79 aa7.33□□□□□ -1.24
COL4A6-202ENST00000372216 B5MCH6 92 aa7.33□□□□□ -1.24
COL4A6-202ENST00000372216 FAM236DA0A1B0GTK5 79 aa7.33□□□□□ -1.24
COL4A6-202ENST00000372216 FAM236CP0DP71 79 aa7.33□□□□□ -1.24
COL4A6-202ENST00000372216 ZFAND2AQ8N6M9 145 aa7.33□□□□□ -1.24
COL4A6-202ENST00000372216 CLUHP3Q96NS8 147 aa7.33□□□□□ -1.24
COL4A6-202ENST00000372216 TRBV10-1A0A0K0K1A3 114 aa7.33□□□□□ -1.24
COL4A6-202ENST00000372216 LINC01620Q4KN68 170 aa7.33□□□□□ -1.24
COL4A6-202ENST00000372216 SMIM20Q8N5G0 67 aa7.32□□□□□ -1.24
COL4A6-202ENST00000372216 LINC01006Q8NI28 216 aa7.32□□□□□ -1.24
COL4A6-202ENST00000372216 C19orf71A6NCJ1 209 aa7.32□□□□□ -1.24
COL4A6-202ENST00000372216 BBC3Q96PG8 261 aaPredicted RBP7.32□□□□□ -1.24
COL4A6-202ENST00000372216 C1orf158Q8N1D5 194 aa7.32□□□□□ -1.24
COL4A6-202ENST00000372216 UPK3BQ9BT76 320 aa7.32□□□□□ -1.24
COL4A6-202ENST00000372216 NUPR2A6NF83 97 aa7.32□□□□□ -1.24
COL4A6-202ENST00000372216 BRK1Q8WUW1 75 aa7.32□□□□□ -1.24
COL4A6-202ENST00000372216 LINC01545Q5VT33 79 aa7.31□□□□□ -1.24
COL4A6-202ENST00000372216 LOC100131303A0A0U1RQF7 123 aa7.31□□□□□ -1.24
COL4A6-202ENST00000372216 CIRBP-AS1Q8TBR5 109 aa7.31□□□□□ -1.24
COL4A6-202ENST00000372216 H0YGX0 51 aa7.31□□□□□ -1.24
COL4A6-202ENST00000372216 NUPR1O60356 82 aa7.31□□□□□ -1.24
COL4A6-202ENST00000372216 LINC00467Q9BRT7 94 aa7.31□□□□□ -1.24
COL4A6-202ENST00000372216 ZFAND3Q9H8U3 227 aa7.31□□□□□ -1.24
COL4A6-202ENST00000372216 C11orf86A6NJI1 115 aa7.3□□□□□ -1.24
COL4A6-202ENST00000372216 BPY2O14599 106 aa7.3□□□□□ -1.24
COL4A6-202ENST00000372216 MIFP14174 115 aa7.3□□□□□ -1.24
COL4A6-202ENST00000372216 GDF5OSQ5U4N7 250 aa7.3□□□□□ -1.24
COL4A6-202ENST00000372216 C20orf203Q8NBC4 194 aa7.3□□□□□ -1.24
COL4A6-202ENST00000372216 PLAC8L1A1L4L8 177 aa7.3□□□□□ -1.24
COL4A6-202ENST00000372216 KRTAP10-9P60411 292 aa7.3□□□□□ -1.24
COL4A6-202ENST00000372216 TRAV10A0A0B4J240 114 aa7.3□□□□□ -1.24
COL4A6-202ENST00000372216 NDUFC2O95298 119 aa7.29□□□□□ -1.24
COL4A6-202ENST00000372216 Q6ZS46 218 aa7.29□□□□□ -1.24
COL4A6-202ENST00000372216 TMEM256-PLSCR3K7ERE1 68 aa7.29□□□□□ -1.24
COL4A6-202ENST00000372216 WFDC13Q8IUB5 93 aa7.29□□□□□ -1.24
COL4A6-202ENST00000372216 C10orf142B7Z368 130 aa7.29□□□□□ -1.24
COL4A6-202ENST00000372216 PRR4Q16378 134 aa7.29□□□□□ -1.24
COL4A6-202ENST00000372216 LRP4O75096 1905 aa7.28□□□□□ -1.24
COL4A6-202ENST00000372216 IGHV1-58A0A0C4DH39 117 aa7.28□□□□□ -1.24
COL4A6-202ENST00000372216 FRMD6-AS1P0C7T7 363 aa7.28□□□□□ -1.24
COL4A6-202ENST00000372216 Q8N6K4 173 aa7.28□□□□□ -1.24
COL4A6-202ENST00000372216 K7ERS5 55 aa7.28□□□□□ -1.24
COL4A6-202ENST00000372216 BRI3O95415 125 aa7.28□□□□□ -1.24
COL4A6-202ENST00000372216 LINC00322Q6ZN03 302 aaPredicted RBP7.28□□□□□ -1.24
COL4A6-202ENST00000372216 Q8N976 141 aa7.28□□□□□ -1.24
COL4A6-202ENST00000372216 CDPF1Q6NVV7 123 aa7.28□□□□□ -1.24
COL4A6-202ENST00000372216 PIK3CD-AS1Q5SR53 167 aa7.28□□□□□ -1.24
COL4A6-202ENST00000372216 KPRPQ5T749 579 aaPredicted RBP7.27□□□□□ -1.25
COL4A6-202ENST00000372216 NEXN-AS1Q8NBZ9 246 aa7.27□□□□□ -1.25
COL4A6-202ENST00000372216 CFAP126Q5VTH2 177 aa7.27□□□□□ -1.25
COL4A6-202ENST00000372216 E9PLD3 99 aa7.27□□□□□ -1.25
COL4A6-202ENST00000372216 SDIM1Q6ZPB5 146 aa7.27□□□□□ -1.25
COL4A6-202ENST00000372216 ZNF295-AS1Q8N0V1 137 aa7.27□□□□□ -1.25
COL4A6-202ENST00000372216 IGLV5-52A0A0A0MRZ9 124 aa7.27□□□□□ -1.25
COL4A6-202ENST00000372216 MED12LQ86YW9 2145 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms