RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 A0A0J9YY99 117 aa14.93□□□□□ -0.02
VEGFA-204ENST00000372064 FAM104AQ969W3 186 aa14.93□□□□□ -0.02
VEGFA-204ENST00000372064 AMELXQ99217 191 aa14.93□□□□□ -0.02
VEGFA-204ENST00000372064 TSSC4Q9Y5U2 329 aaPredicted RBP14.93□□□□□ -0.02
VEGFA-204ENST00000372064 TMEM223A0PJW6 202 aa14.92□□□□□ -0.02
VEGFA-204ENST00000372064 RNASE1P07998 156 aaKnown RBP14.92□□□□□ -0.02
VEGFA-204ENST00000372064 STHQ8IWL8 128 aa14.92□□□□□ -0.02
VEGFA-204ENST00000372064 C16orf95Q9H693 158 aa14.92□□□□□ -0.02
VEGFA-204ENST00000372064 ZNF479Q96JC4 524 aa14.92□□□□□ -0.02
VEGFA-204ENST00000372064 VCX2Q9H322 139 aa14.91□□□□□ -0.02
VEGFA-204ENST00000372064 RS1O15537 224 aa14.91□□□□□ -0.02
VEGFA-204ENST00000372064 AZU1P20160 251 aa14.91□□□□□ -0.02
VEGFA-204ENST00000372064 CRYBA4P53673 196 aa14.91□□□□□ -0.02
VEGFA-204ENST00000372064 IGHV3-53P01767 116 aa14.9□□□□□ -0.02
VEGFA-204ENST00000372064 RRN3P1Q2M238 152 aa14.9□□□□□ -0.02
VEGFA-204ENST00000372064 SPANXB1Q9NS25 103 aaPredicted RBP14.9□□□□□ -0.02
VEGFA-204ENST00000372064 IGHV3OR16-12A0A075B7B8 117 aa14.9□□□□□ -0.02
VEGFA-204ENST00000372064 J3QQQ9 107 aa14.9□□□□□ -0.02
VEGFA-204ENST00000372064 ZNF22P17026 224 aaPredicted RBP14.9□□□□□ -0.02
VEGFA-204ENST00000372064 IL17DQ8TAD2 202 aa14.89□□□□□ -0.03
VEGFA-204ENST00000372064 DNAJC30Q96LL9 226 aa14.89□□□□□ -0.03
VEGFA-204ENST00000372064 UNC79Q9P2D8 2635 aa14.89□□□□□ -0.03
VEGFA-204ENST00000372064 TMEM238LA0A1B0GVL6 79 aa14.89□□□□□ -0.03
VEGFA-204ENST00000372064 A6NJY4 79 aa14.89□□□□□ -0.03
VEGFA-204ENST00000372064 C1orf158Q8N1D5 194 aa14.89□□□□□ -0.03
VEGFA-204ENST00000372064 LEPROTO15243 131 aa14.89□□□□□ -0.03
VEGFA-204ENST00000372064 SRSF9Q13242 221 aaKnown RBP eCLIP14.89□□□□□ -0.03
VEGFA-204ENST00000372064 CHCHD7Q9BUK0 85 aa14.89□□□□□ -0.03
VEGFA-204ENST00000372064 UBE2D1P51668 147 aa14.88□□□□□ -0.03
VEGFA-204ENST00000372064 KMT2BQ9UMN6 2715 aaPredicted RBP14.88□□□□□ -0.03
VEGFA-204ENST00000372064 SLC25A29Q8N8R3 303 aa14.88□□□□□ -0.03
VEGFA-204ENST00000372064 A0A0J9YXV3 536 aa14.87□□□□□ -0.03
VEGFA-204ENST00000372064 K7ERU9 68 aa14.87□□□□□ -0.03
VEGFA-204ENST00000372064 LGALS3P17931 250 aaKnown RBP14.87□□□□□ -0.03
VEGFA-204ENST00000372064 MRPS36P82909 103 aaKnown RBP14.86□□□□□ -0.03
VEGFA-204ENST00000372064 NOTCH3Q9UM47 2321 aa14.85□□□□□ -0.03
VEGFA-204ENST00000372064 SAP30O75446 220 aa14.85□□□□□ -0.03
VEGFA-204ENST00000372064 RNF151Q2KHN1 245 aa14.85□□□□□ -0.03
VEGFA-204ENST00000372064 SPANXA1Q9NS26 97 aa14.85□□□□□ -0.03
VEGFA-204ENST00000372064 CEMP1Q6PRD7 247 aaPredicted RBP14.85□□□□□ -0.03
VEGFA-204ENST00000372064 UBE2D4Q9Y2X8 147 aa14.85□□□□□ -0.03
VEGFA-204ENST00000372064 IGHV3-30P01768 117 aa14.84□□□□□ -0.03
VEGFA-204ENST00000372064 IGHV3-30-5P0DP03 117 aa14.84□□□□□ -0.03
VEGFA-204ENST00000372064 JMJD1CQ15652 2540 aa14.84□□□□□ -0.03
VEGFA-204ENST00000372064 NIPBLQ6KC79 2804 aaeCLIP14.84□□□□□ -0.031e-6■■□□□ 11.7
VEGFA-204ENST00000372064 FASNP49327 2511 aaKnown RBP14.84□□□□□ -0.03
VEGFA-204ENST00000372064 SMR3AQ99954 134 aa14.83□□□□□ -0.03
VEGFA-204ENST00000372064 ZNF418Q8TF45 676 aaPredicted RBP14.83□□□□□ -0.04
VEGFA-204ENST00000372064 IGHV3-38A0A0C4DH36 116 aa14.82□□□□□ -0.04
VEGFA-204ENST00000372064 HILS1P60008 231 aa14.82□□□□□ -0.04
VEGFA-204ENST00000372064 WFDC10AQ9H1F0 79 aa14.82□□□□□ -0.04
VEGFA-204ENST00000372064 PGPEP1Q9NXJ5 209 aa14.82□□□□□ -0.04
VEGFA-204ENST00000372064 CMC4P56277 68 aaPredicted RBP14.81□□□□□ -0.04
VEGFA-204ENST00000372064 TRGV1A0A0A0MS02 117 aa14.81□□□□□ -0.04
VEGFA-204ENST00000372064 RNASE13Q5GAN3 156 aaKnown RBP14.81□□□□□ -0.04
VEGFA-204ENST00000372064 ADARB2-AS1A8MUL3 147 aa14.8□□□□□ -0.04
VEGFA-204ENST00000372064 COTL1Q14019 142 aa14.8□□□□□ -0.04
VEGFA-204ENST00000372064 C21orf62-AS1Q17RA5 79 aa14.8□□□□□ -0.04
VEGFA-204ENST00000372064 IGHV3-64A0A075B6Q5 118 aa14.79□□□□□ -0.04
VEGFA-204ENST00000372064 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.79□□□□□ -0.04
VEGFA-204ENST00000372064 IGKV2-29A2NJV5 120 aaPredicted RBP14.79□□□□□ -0.04
VEGFA-204ENST00000372064 HIVEP2P31629 2446 aa14.79□□□□□ -0.04
VEGFA-204ENST00000372064 F8W1H4 67 aa14.79□□□□□ -0.04
VEGFA-204ENST00000372064 NDUFA11Q86Y39 141 aa14.79□□□□□ -0.04
VEGFA-204ENST00000372064 TMEM263Q8WUH6 116 aaKnown RBP14.79□□□□□ -0.04
VEGFA-204ENST00000372064 FAM110AQ9BQ89 295 aa14.79□□□□□ -0.04
VEGFA-204ENST00000372064 SETXQ7Z333 2677 aaKnown RBP14.79□□□□□ -0.04
VEGFA-204ENST00000372064 TINCRA0A1B0GVN0 87 aa14.79□□□□□ -0.04
VEGFA-204ENST00000372064 G3V4G9 280 aa14.79□□□□□ -0.04
VEGFA-204ENST00000372064 TSPAN13O95857 204 aa14.78□□□□□ -0.04
VEGFA-204ENST00000372064 IGLV1-51P01701 117 aa14.78□□□□□ -0.04
VEGFA-204ENST00000372064 GIG44P09565 113 aaPredicted RBP14.78□□□□□ -0.04
VEGFA-204ENST00000372064 H3BMG7 143 aa14.78□□□□□ -0.04
VEGFA-204ENST00000372064 IGHV3-30-3P0DP02 117 aa14.77□□□□□ -0.04
VEGFA-204ENST00000372064 VPS25Q9BRG1 176 aa14.77□□□□□ -0.04
VEGFA-204ENST00000372064 Q6ZTI0 123 aa14.77□□□□□ -0.05
VEGFA-204ENST00000372064 Q6ZUT4 128 aa14.76□□□□□ -0.05
VEGFA-204ENST00000372064 C10orf126Q8N4M7 172 aa14.76□□□□□ -0.05
VEGFA-204ENST00000372064 TIMM21Q9BVV7 248 aa14.76□□□□□ -0.05
VEGFA-204ENST00000372064 CFC1BP0CG36 223 aa14.76□□□□□ -0.05
VEGFA-204ENST00000372064 CFC1P0CG37 223 aa14.76□□□□□ -0.05
VEGFA-204ENST00000372064 C19orf73Q9NVV2 129 aa14.76□□□□□ -0.05
VEGFA-204ENST00000372064 RPL35AP18077 110 aaKnown RBP14.76□□□□□ -0.05
VEGFA-204ENST00000372064 NDUFA7O95182 113 aa14.75□□□□□ -0.05
VEGFA-204ENST00000372064 APOMO95445 188 aa14.75□□□□□ -0.05
VEGFA-204ENST00000372064 IGHV1-58A0A0C4DH39 117 aa14.75□□□□□ -0.05
VEGFA-204ENST00000372064 PRO0461Q9UI25 63 aa14.75□□□□□ -0.05
VEGFA-204ENST00000372064 TRAV4A0A0B4J268 109 aa14.74□□□□□ -0.05
VEGFA-204ENST00000372064 TRBV10-1A0A0K0K1A3 114 aa14.74□□□□□ -0.05
VEGFA-204ENST00000372064 UBE2D3P61077 147 aa14.74□□□□□ -0.05
VEGFA-204ENST00000372064 UBE2D2P62837 147 aa14.74□□□□□ -0.05
VEGFA-204ENST00000372064 DAZ2Q13117 558 aaKnown RBP14.73□□□□□ -0.05
VEGFA-204ENST00000372064 A0A0J9YXY3 114 aa14.73□□□□□ -0.05
VEGFA-204ENST00000372064 K7EQD1 137 aa14.73□□□□□ -0.05
VEGFA-204ENST00000372064 TMEM238C9JI98 176 aa14.72□□□□□ -0.05
VEGFA-204ENST00000372064 WFDC2Q14508 124 aa14.72□□□□□ -0.05
VEGFA-204ENST00000372064 NOP10Q9NPE3 64 aaKnown RBP14.72□□□□□ -0.05
VEGFA-204ENST00000372064 HECTD1Q9ULT8 2610 aa14.72□□□□□ -0.05
VEGFA-204ENST00000372064 TRAV8-3A0A0A6YYJ7 113 aa14.72□□□□□ -0.05
VEGFA-204ENST00000372064 VSIG2Q96IQ7 327 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms