RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 IGLV4-3A0A075B6K6 122 aa12.92□□□□□ -0.34
PTP4A1-201ENST00000370651 CDKN2A-AS1Q9UH64 79 aa12.92□□□□□ -0.34
PTP4A1-201ENST00000370651 PTPN13Q12923 2485 aa12.91□□□□□ -0.34
PTP4A1-201ENST00000370651 IGHV4-28A0A0C4DH34 117 aa12.91□□□□□ -0.34
PTP4A1-201ENST00000370651 TRIAP1O43715 76 aa12.91□□□□□ -0.34
PTP4A1-201ENST00000370651 UBE2BP63146 152 aa12.91□□□□□ -0.34
PTP4A1-201ENST00000370651 C20orf173Q96LM9 149 aa12.91□□□□□ -0.34
PTP4A1-201ENST00000370651 UQCRQO14949 82 aa12.91□□□□□ -0.34
PTP4A1-201ENST00000370651 ZFAND2AQ8N6M9 145 aa12.91□□□□□ -0.34
PTP4A1-201ENST00000370651 TRBV30A0A0K0K1B3 111 aa12.9□□□□□ -0.35
PTP4A1-201ENST00000370651 ESM1Q9NQ30 184 aa12.9□□□□□ -0.35
PTP4A1-201ENST00000370651 TMEM263Q8WUH6 116 aaKnown RBP12.89□□□□□ -0.35
PTP4A1-201ENST00000370651 LY6LH3BQJ8 138 aa12.89□□□□□ -0.35
PTP4A1-201ENST00000370651 NDUFA1O15239 70 aa12.89□□□□□ -0.35
PTP4A1-201ENST00000370651 SPAG11BQ08648 103 aa12.89□□□□□ -0.35
PTP4A1-201ENST00000370651 SPART-AS1P0CW21 52 aa12.88□□□□□ -0.35
PTP4A1-201ENST00000370651 Q8NA96 180 aa12.88□□□□□ -0.35
PTP4A1-201ENST00000370651 SORL1Q92673 2214 aa12.88□□□□□ -0.35
PTP4A1-201ENST00000370651 NRACQ8N912 160 aa12.88□□□□□ -0.35
PTP4A1-201ENST00000370651 RPL18AQ02543 176 aaKnown RBP12.88□□□□□ -0.35
PTP4A1-201ENST00000370651 LINC00467Q9BRT7 94 aa12.88□□□□□ -0.35
PTP4A1-201ENST00000370651 CUL9Q8IWT3 2517 aa12.88□□□□□ -0.35
PTP4A1-201ENST00000370651 IGHV3-30P01768 117 aa12.88□□□□□ -0.35
PTP4A1-201ENST00000370651 IGHV3-30-5P0DP03 117 aa12.88□□□□□ -0.35
PTP4A1-201ENST00000370651 LMO4P61968 165 aa12.88□□□□□ -0.35
PTP4A1-201ENST00000370651 CFAP126Q5VTH2 177 aa12.88□□□□□ -0.35
PTP4A1-201ENST00000370651 DIRC1Q969H9 104 aa12.88□□□□□ -0.35
PTP4A1-201ENST00000370651 SPATA25Q9BR10 227 aa12.87□□□□□ -0.35
PTP4A1-201ENST00000370651 EBI3Q14213 229 aa12.87□□□□□ -0.35
PTP4A1-201ENST00000370651 M0QY20 66 aa12.87□□□□□ -0.35
PTP4A1-201ENST00000370651 PDE6GP18545 87 aa12.87□□□□□ -0.35
PTP4A1-201ENST00000370651 MAP6D1Q9H9H5 199 aa12.87□□□□□ -0.35
PTP4A1-201ENST00000370651 K7EQG2 157 aa12.86□□□□□ -0.35
PTP4A1-201ENST00000370651 NDUFC2O95298 119 aa12.86□□□□□ -0.35
PTP4A1-201ENST00000370651 FSTL3O95633 263 aa12.86□□□□□ -0.35
PTP4A1-201ENST00000370651 TRAV23DV6A0A075B6W5 121 aa12.86□□□□□ -0.35
PTP4A1-201ENST00000370651 LINC00308Q8TCZ7 52 aa12.86□□□□□ -0.35
PTP4A1-201ENST00000370651 NAV3Q8IVL0 2385 aa12.86□□□□□ -0.35
PTP4A1-201ENST00000370651 DEFB113Q30KQ7 82 aa12.85□□□□□ -0.35
PTP4A1-201ENST00000370651 SDIM1Q6ZPB5 146 aa12.85□□□□□ -0.35
PTP4A1-201ENST00000370651 URB1-AS1Q96HZ7 61 aa12.85□□□□□ -0.35
PTP4A1-201ENST00000370651 TRBV27A0A0K0K1C4 114 aa12.85□□□□□ -0.35
PTP4A1-201ENST00000370651 C4orf3Q8WVX3 66 aa12.85□□□□□ -0.35
PTP4A1-201ENST00000370651 MRPS12O15235 138 aaKnown RBP12.85□□□□□ -0.35
PTP4A1-201ENST00000370651 SONP18583 2426 aaKnown RBP12.84□□□□□ -0.35
PTP4A1-201ENST00000370651 MP68P56378 58 aa12.84□□□□□ -0.35
PTP4A1-201ENST00000370651 C5orf47Q569G3 176 aa12.84□□□□□ -0.35
PTP4A1-201ENST00000370651 HIGD2BQ4VC39 106 aa12.84□□□□□ -0.35
PTP4A1-201ENST00000370651 C9orf66Q5T8R8 295 aa12.84□□□□□ -0.35
PTP4A1-201ENST00000370651 NRGNQ92686 78 aa12.84□□□□□ -0.35
PTP4A1-201ENST00000370651 C11orf21Q9P2W6 132 aa12.83□□□□□ -0.36
PTP4A1-201ENST00000370651 Q6ZTI0 123 aa12.83□□□□□ -0.36
PTP4A1-201ENST00000370651 GAS8-AS1O95177 125 aa12.83□□□□□ -0.36
PTP4A1-201ENST00000370651 WFDC9Q8NEX5 89 aa12.83□□□□□ -0.36
PTP4A1-201ENST00000370651 UPK3BQ9BT76 320 aa12.82□□□□□ -0.36
PTP4A1-201ENST00000370651 TRBV6-5A0A0K0K1A5 114 aa12.82□□□□□ -0.36
PTP4A1-201ENST00000370651 NDUFS5O43920 106 aa12.82□□□□□ -0.36
PTP4A1-201ENST00000370651 TNFRSF13BO14836 293 aaPredicted RBP12.82□□□□□ -0.36
PTP4A1-201ENST00000370651 C20orf197Q8N268 126 aa12.82□□□□□ -0.36
PTP4A1-201ENST00000370651 INSL3P51460 131 aa12.82□□□□□ -0.36
PTP4A1-201ENST00000370651 C3orf22Q8N5N4 141 aa12.82□□□□□ -0.36
PTP4A1-201ENST00000370651 PRO0255Q9UI72 69 aa12.82□□□□□ -0.36
PTP4A1-201ENST00000370651 KLK12Q9UKR0 248 aa12.81□□□□□ -0.36
PTP4A1-201ENST00000370651 PRB2P02812 416 aaPredicted RBP12.81□□□□□ -0.36
PTP4A1-201ENST00000370651 XGP55808 180 aa12.81□□□□□ -0.36
PTP4A1-201ENST00000370651 UFSP1Q6NVU6 142 aa12.8□□□□□ -0.36
PTP4A1-201ENST00000370651 ATG2AQ2TAZ0 1938 aa12.8□□□□□ -0.36
PTP4A1-201ENST00000370651 MYO18BQ8IUG5 2567 aa12.8□□□□□ -0.36
PTP4A1-201ENST00000370651 TIRAPP58753 221 aa12.8□□□□□ -0.36
PTP4A1-201ENST00000370651 PIK3CD-AS1Q5SR53 167 aa12.8□□□□□ -0.36
PTP4A1-201ENST00000370651 PYGO1Q9Y3Y4 419 aa12.8□□□□□ -0.36
PTP4A1-201ENST00000370651 RNASE3P12724 160 aaKnown RBP12.79□□□□□ -0.36
PTP4A1-201ENST00000370651 CNFNQ9BYD5 112 aa12.79□□□□□ -0.36
PTP4A1-201ENST00000370651 ZMAT4Q9H898 229 aa12.79□□□□□ -0.36
PTP4A1-201ENST00000370651 COX7BP24311 80 aa12.78□□□□□ -0.36
PTP4A1-201ENST00000370651 PRR9Q5T870 116 aa12.78□□□□□ -0.36
PTP4A1-201ENST00000370651 Q6ZS46 218 aa12.78□□□□□ -0.36
PTP4A1-201ENST00000370651 DEFB135Q30KP9 77 aa12.77□□□□□ -0.37
PTP4A1-201ENST00000370651 DEFB4AO15263 64 aa12.77□□□□□ -0.37
PTP4A1-201ENST00000370651 POLR2KP53803 58 aaKnown RBP12.77□□□□□ -0.37
PTP4A1-201ENST00000370651 ATP5EP2Q5VTU8 51 aa12.77□□□□□ -0.37
PTP4A1-201ENST00000370651 IBA57-AS1B1ANH7 110 aa12.76□□□□□ -0.37
PTP4A1-201ENST00000370651 MUC22E2RYF6 1773 aaPredicted RBP12.76□□□□□ -0.37
PTP4A1-201ENST00000370651 HIVEP2P31629 2446 aa12.76□□□□□ -0.37
PTP4A1-201ENST00000370651 TIMM17BO60830 172 aa12.76□□□□□ -0.37
PTP4A1-201ENST00000370651 SLPIP03973 132 aa12.76□□□□□ -0.37
PTP4A1-201ENST00000370651 A8MZ25 164 aa12.76□□□□□ -0.37
PTP4A1-201ENST00000370651 LST1O00453 97 aa12.76□□□□□ -0.37
PTP4A1-201ENST00000370651 TSHBP01222 138 aa12.76□□□□□ -0.37
PTP4A1-201ENST00000370651 IMUPQ9GZP8 106 aa12.76□□□□□ -0.37
PTP4A1-201ENST00000370651 PROK1P58294 105 aa12.75□□□□□ -0.37
PTP4A1-201ENST00000370651 NDUFB1O75438 58 aa12.74□□□□□ -0.37
PTP4A1-201ENST00000370651 ARHGAP32A7KAX9 2087 aa12.74□□□□□ -0.37
PTP4A1-201ENST00000370651 Q8N6K4 173 aa12.74□□□□□ -0.37
PTP4A1-201ENST00000370651 FAM236DA0A1B0GTK5 79 aa12.73□□□□□ -0.37
PTP4A1-201ENST00000370651 H7C423 109 aa12.73□□□□□ -0.37
PTP4A1-201ENST00000370651 FAM236CP0DP71 79 aa12.73□□□□□ -0.37
PTP4A1-201ENST00000370651 BRK1Q8WUW1 75 aa12.73□□□□□ -0.37
PTP4A1-201ENST00000370651 ENHOQ6UWT2 76 aa12.73□□□□□ -0.37
PTP4A1-201ENST00000370651 LINC00269Q8N2A0 174 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms