RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 TRBV7-1A0A0A6YYK4 115 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 IGHV3-30P01768 117 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 PRSS1P07477 247 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 COX6CP09669 75 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 IGHV3-30-5P0DP03 117 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 PRR3P79522 188 aaKnown RBP3.72□□□□□ -1.81
UBE3D-202ENST00000369746 DEFB110Q30KQ9 67 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 MIR17HGQ75NE6 70 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 SLC25A29Q8N8R3 303 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 TMEM263Q8WUH6 116 aaKnown RBP3.72□□□□□ -1.81
UBE3D-202ENST00000369746 NABP2Q9BQ15 211 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 C11orf21Q9P2W6 132 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 TANC2Q9HCD6 1990 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 PKDREJQ9NTG1 2253 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 CLPSL1A2RUU4 121 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 H7C423 109 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 UBE2L6O14933 153 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 S100A7L2Q5SY68 101 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 ATP5EP2Q5VTU8 51 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 REG3GQ6UW15 175 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 ITLN1Q8WWA0 313 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 FAM167A-AS1Q96KT0 104 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 LAMA1P25391 3075 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 MSMBP08118 114 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 DEFA4P12838 97 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 LMO4P61968 165 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 LCA10Q71F78 164 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 CCL13Q99616 98 aa3.72□□□□□ -1.81
UBE3D-202ENST00000369746 RELNP78509 3460 aa3.71□□□□□ -1.81
UBE3D-202ENST00000369746 A0A0J9YX75 114 aa3.71□□□□□ -1.82
UBE3D-202ENST00000369746 A0A0J9YY99 117 aa3.71□□□□□ -1.82
UBE3D-202ENST00000369746 CIRBPQ14011 172 aaKnown RBP3.71□□□□□ -1.82
UBE3D-202ENST00000369746 SPTSSAQ969W0 71 aa3.71□□□□□ -1.82
UBE3D-202ENST00000369746 TMEM243Q9BU79 118 aa3.71□□□□□ -1.82
UBE3D-202ENST00000369746 Q9H3A6 140 aa3.71□□□□□ -1.82
UBE3D-202ENST00000369746 RTTNQ86VV8 2226 aa3.71□□□□□ -1.82
UBE3D-202ENST00000369746 TRAV3A0A0B4J244 114 aa3.71□□□□□ -1.82
UBE3D-202ENST00000369746 IGKV1-12A0A0C4DH73 117 aa3.71□□□□□ -1.82
UBE3D-202ENST00000369746 D6R8Y8 96 aa3.71□□□□□ -1.82
UBE3D-202ENST00000369746 ZNHIT1O43257 154 aa3.71□□□□□ -1.82
UBE3D-202ENST00000369746 TIMM17BO60830 172 aa3.71□□□□□ -1.82
UBE3D-202ENST00000369746 IGKV1D-12P01611 117 aa3.71□□□□□ -1.82
UBE3D-202ENST00000369746 RBM3P98179 157 aaKnown RBP3.71□□□□□ -1.82
UBE3D-202ENST00000369746 KLKP1Q107X0 134 aa3.71□□□□□ -1.82
UBE3D-202ENST00000369746 PIGYQ3MUY2 71 aa3.71□□□□□ -1.82
UBE3D-202ENST00000369746 HEATR1Q9H583 2144 aaKnown RBP3.71□□□□□ -1.82
UBE3D-202ENST00000369746 MRPL35Q9NZE8 188 aaKnown RBP3.71□□□□□ -1.82
UBE3D-202ENST00000369746 DIDO1Q9BTC0 2240 aaKnown RBP3.71□□□□□ -1.82
UBE3D-202ENST00000369746 DSCAMO60469 2012 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 LAMA5O15230 3695 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 TRAV40A0A0B4J280 105 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 IGHV1-69DA0A0B4J2H0 117 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 TRBV10-3A0A0K0K1G6 114 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 IBA57-AS1B1ANH7 110 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 F8W735 103 aaPredicted RBP3.7□□□□□ -1.82
UBE3D-202ENST00000369746 WNT9BO14905 357 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 COX7A2P2O60397 106 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 CCL3P10147 92 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 ZNF137PP52743 207 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 CRIP2P52943 208 aaPredicted RBP3.7□□□□□ -1.82
UBE3D-202ENST00000369746 WFDC9Q8NEX5 89 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 TTTY13Q9BZ97 58 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 IGKV3D-15A0A087WSY6 115 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 TMEM223A0PJW6 202 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 ZNF815PA8K554 130 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 EGFEM1PQ0D2K5 195 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 C10orf128Q5T292 105 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 CNFNQ9BYD5 112 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 LINC00474Q9P2X8 69 aa3.7□□□□□ -1.82
UBE3D-202ENST00000369746 DNAH1Q9P2D7 4330 aa3.69□□□□□ -1.82
UBE3D-202ENST00000369746 TRBV27A0A0K0K1C4 114 aa3.69□□□□□ -1.82
UBE3D-202ENST00000369746 BUB1B-PAK6H3BSN5 160 aa3.69□□□□□ -1.82
UBE3D-202ENST00000369746 NDUFB3O43676 98 aa3.69□□□□□ -1.82
UBE3D-202ENST00000369746 ZNF22P17026 224 aaPredicted RBP3.69□□□□□ -1.82
UBE3D-202ENST00000369746 ODF3L2Q3SX64 289 aa3.69□□□□□ -1.82
UBE3D-202ENST00000369746 MRPL51Q4U2R6 128 aaKnown RBP3.69□□□□□ -1.82
UBE3D-202ENST00000369746 Q8N2B8 174 aa3.69□□□□□ -1.82
UBE3D-202ENST00000369746 UBALD1Q8TB05 177 aa3.69□□□□□ -1.82
UBE3D-202ENST00000369746 LINC00588Q9Y4M8 146 aa3.69□□□□□ -1.82
UBE3D-202ENST00000369746 IGHV6-1A0A0B4J1U7 121 aa3.69□□□□□ -1.82
UBE3D-202ENST00000369746 SRRM5B3KS81 715 aa3.69□□□□□ -1.82
UBE3D-202ENST00000369746 ARMS2P0C7Q2 107 aa3.69□□□□□ -1.82
UBE3D-202ENST00000369746 FHL2Q14192 279 aa3.69□□□□□ -1.82
UBE3D-202ENST00000369746 Q86TA4 180 aa3.69□□□□□ -1.82
UBE3D-202ENST00000369746 GPHB5Q86YW7 130 aa3.69□□□□□ -1.82
UBE3D-202ENST00000369746 CD177Q8N6Q3 437 aa3.69□□□□□ -1.82
UBE3D-202ENST00000369746 SMCR5Q8TEV8 140 aa3.69□□□□□ -1.82
UBE3D-202ENST00000369746 TIMM21Q9BVV7 248 aa3.69□□□□□ -1.82
UBE3D-202ENST00000369746 KNL1Q8NG31 2342 aa3.68□□□□□ -1.82
UBE3D-202ENST00000369746 IGLV2-18A0A075B6J9 118 aa3.68□□□□□ -1.82
UBE3D-202ENST00000369746 IGLV9-49A0A0B4J1Y8 123 aa3.68□□□□□ -1.82
UBE3D-202ENST00000369746 CKS2P33552 79 aa3.68□□□□□ -1.82
UBE3D-202ENST00000369746 SLC50A1Q9BRV3 221 aa3.68□□□□□ -1.82
UBE3D-202ENST00000369746 COL12A1Q99715 3063 aa3.68□□□□□ -1.82
UBE3D-202ENST00000369746 SDHAF1A6NFY7 115 aa3.68□□□□□ -1.82
UBE3D-202ENST00000369746 H7BZZ5 65 aa3.68□□□□□ -1.82
UBE3D-202ENST00000369746 CDK2AP2O75956 126 aa3.68□□□□□ -1.82
UBE3D-202ENST00000369746 Q8IYB0 196 aa3.68□□□□□ -1.82
UBE3D-202ENST00000369746 FAM216BQ8N7L0 139 aa3.68□□□□□ -1.82
UBE3D-202ENST00000369746 TOMM6Q96B49 74 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms