RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 RPL39P62891 51 aaKnown RBP9.99□□□□□ -0.81
HMGCS2-201ENST00000369406 SLC25A29Q8N8R3 303 aa9.99□□□□□ -0.81
HMGCS2-201ENST00000369406 DNAH9Q9NYC9 4486 aa9.99□□□□□ -0.81
HMGCS2-201ENST00000369406 IGHV3-38A0A0C4DH36 116 aa9.98□□□□□ -0.81
HMGCS2-201ENST00000369406 FAM222AQ5U5X8 452 aa9.98□□□□□ -0.81
HMGCS2-201ENST00000369406 SMIM9A6NGZ8 99 aa9.98□□□□□ -0.81
HMGCS2-201ENST00000369406 SPATA45Q537H7 98 aa9.98□□□□□ -0.81
HMGCS2-201ENST00000369406 IFI27L1Q96BM0 104 aa9.98□□□□□ -0.81
HMGCS2-201ENST00000369406 MAP1LC3CQ9BXW4 147 aa9.98□□□□□ -0.81
HMGCS2-201ENST00000369406 A8MZ25 164 aa9.97□□□□□ -0.81
HMGCS2-201ENST00000369406 HNRNPA3P51991 378 aaKnown RBP9.97□□□□□ -0.81
HMGCS2-201ENST00000369406 FHL2Q14192 279 aa9.97□□□□□ -0.81
HMGCS2-201ENST00000369406 Q6ZN92 141 aa9.97□□□□□ -0.81
HMGCS2-201ENST00000369406 PHLDA1Q8WV24 401 aaPredicted RBP9.97□□□□□ -0.81
HMGCS2-201ENST00000369406 H7C1H1 209 aa9.97□□□□□ -0.81
HMGCS2-201ENST00000369406 ORMDL2Q53FV1 153 aa9.97□□□□□ -0.81
HMGCS2-201ENST00000369406 C2orf66Q6UXQ4 117 aa9.97□□□□□ -0.81
HMGCS2-201ENST00000369406 TOMM6Q96B49 74 aa9.97□□□□□ -0.81
HMGCS2-201ENST00000369406 VPS25Q9BRG1 176 aa9.97□□□□□ -0.81
HMGCS2-201ENST00000369406 UQCR10Q9UDW1 63 aa9.97□□□□□ -0.81
HMGCS2-201ENST00000369406 COX11Q9Y6N1 276 aa9.97□□□□□ -0.81
HMGCS2-201ENST00000369406 K7EQD1 137 aa9.96□□□□□ -0.81
HMGCS2-201ENST00000369406 LINC01545Q5VT33 79 aa9.96□□□□□ -0.81
HMGCS2-201ENST00000369406 HINT1P49773 126 aaPredicted RBP9.96□□□□□ -0.82
HMGCS2-201ENST00000369406 DKK2Q9UBU2 259 aa9.96□□□□□ -0.82
HMGCS2-201ENST00000369406 TNFRSF18Q9Y5U5 241 aa9.96□□□□□ -0.82
HMGCS2-201ENST00000369406 I3L3M4 83 aa9.95□□□□□ -0.82
HMGCS2-201ENST00000369406 IGLC3P0DOY3 106 aa9.95□□□□□ -0.82
HMGCS2-201ENST00000369406 ZC2HC1BQ5TFG8 222 aa9.95□□□□□ -0.82
HMGCS2-201ENST00000369406 PET117Q6UWS5 81 aa9.95□□□□□ -0.82
HMGCS2-201ENST00000369406 ZNRF2Q8NHG8 242 aa9.95□□□□□ -0.82
HMGCS2-201ENST00000369406 TP53TG1Q9Y2A0 90 aa9.95□□□□□ -0.82
HMGCS2-201ENST00000369406 K7EIL1 84 aa9.95□□□□□ -0.82
HMGCS2-201ENST00000369406 KIR2DL4Q99706 377 aa9.95□□□□□ -0.82
HMGCS2-201ENST00000369406 GAGE12JA6NER3 117 aa9.94□□□□□ -0.82
HMGCS2-201ENST00000369406 K7EMI3 77 aa9.94□□□□□ -0.82
HMGCS2-201ENST00000369406 GAGE4Q13068 117 aa9.94□□□□□ -0.82
HMGCS2-201ENST00000369406 GAGE5Q13069 117 aa9.94□□□□□ -0.82
HMGCS2-201ENST00000369406 GAGE13Q4V321 117 aa9.94□□□□□ -0.82
HMGCS2-201ENST00000369406 OPRPNQ99935 248 aaPredicted RBP9.94□□□□□ -0.82
HMGCS2-201ENST00000369406 CHTOPQ9Y3Y2 248 aaKnown RBP9.94□□□□□ -0.82
HMGCS2-201ENST00000369406 hDV102S1A0JD36 115 aa9.93□□□□□ -0.82
HMGCS2-201ENST00000369406 FAM104AQ969W3 186 aa9.93□□□□□ -0.82
HMGCS2-201ENST00000369406 CHCHD7Q9BUK0 85 aa9.93□□□□□ -0.82
HMGCS2-201ENST00000369406 IGIPA6NJ69 53 aa9.93□□□□□ -0.82
HMGCS2-201ENST00000369406 MIFP14174 115 aa9.93□□□□□ -0.82
HMGCS2-201ENST00000369406 ODF1Q14990 250 aa9.93□□□□□ -0.82
HMGCS2-201ENST00000369406 SCGB3A1Q96QR1 104 aa9.93□□□□□ -0.82
HMGCS2-201ENST00000369406 TP73-AS1Q9UF72 201 aa9.93□□□□□ -0.82
HMGCS2-201ENST00000369406 TRGV4A0A0C4DH28 118 aa9.92□□□□□ -0.82
HMGCS2-201ENST00000369406 TRBV7-3A0A075B6L6 115 aa9.92□□□□□ -0.82
HMGCS2-201ENST00000369406 UBE2D3P61077 147 aa9.92□□□□□ -0.82
HMGCS2-201ENST00000369406 UBE2D2P62837 147 aa9.92□□□□□ -0.82
HMGCS2-201ENST00000369406 NTM-AS1Q6ZSK4 140 aa9.92□□□□□ -0.82
HMGCS2-201ENST00000369406 SBSPONQ8IVN8 264 aa9.92□□□□□ -0.82
HMGCS2-201ENST00000369406 C20orf203Q8NBC4 194 aa9.92□□□□□ -0.82
HMGCS2-201ENST00000369406 DNAJC30Q96LL9 226 aa9.92□□□□□ -0.82
HMGCS2-201ENST00000369406 LYRM9A8MSI8 78 aa9.91□□□□□ -0.82
HMGCS2-201ENST00000369406 TMEM238C9JI98 176 aa9.91□□□□□ -0.82
HMGCS2-201ENST00000369406 RHOHQ15669 191 aa9.91□□□□□ -0.82
HMGCS2-201ENST00000369406 KPRPQ5T749 579 aaPredicted RBP9.91□□□□□ -0.82
HMGCS2-201ENST00000369406 CEMP1Q6PRD7 247 aaPredicted RBP9.91□□□□□ -0.82
HMGCS2-201ENST00000369406 ERASQ7Z444 233 aa9.91□□□□□ -0.82
HMGCS2-201ENST00000369406 BAALCQ8WXS3 180 aa9.91□□□□□ -0.82
HMGCS2-201ENST00000369406 CYSLTR1Q9Y271 337 aa9.91□□□□□ -0.82
HMGCS2-201ENST00000369406 LGALS9CQ6DKI2 356 aa9.91□□□□□ -0.82
HMGCS2-201ENST00000369406 PRKDCP78527 4128 aaKnown RBP9.9□□□□□ -0.82
HMGCS2-201ENST00000369406 TRBV10-1A0A0K0K1A3 114 aa9.9□□□□□ -0.82
HMGCS2-201ENST00000369406 TRBV6-4A0A1B0GX49 114 aa9.9□□□□□ -0.82
HMGCS2-201ENST00000369406 PRSS1P07477 247 aa9.9□□□□□ -0.82
HMGCS2-201ENST00000369406 LINC00694P0DN24 101 aa9.9□□□□□ -0.82
HMGCS2-201ENST00000369406 OCIAD2Q56VL3 154 aa9.9□□□□□ -0.82
HMGCS2-201ENST00000369406 SVIPQ8NHG7 77 aa9.9□□□□□ -0.82
HMGCS2-201ENST00000369406 CST9LQ9H4G1 147 aa9.9□□□□□ -0.82
HMGCS2-201ENST00000369406 ZMAT4Q9H898 229 aa9.9□□□□□ -0.82
HMGCS2-201ENST00000369406 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.9□□□□□ -0.83
HMGCS2-201ENST00000369406 IGKV2-29A2NJV5 120 aaPredicted RBP9.9□□□□□ -0.83
HMGCS2-201ENST00000369406 ATP5LO75964 103 aa9.9□□□□□ -0.83
HMGCS2-201ENST00000369406 TCTAP57738 103 aa9.9□□□□□ -0.83
HMGCS2-201ENST00000369406 VAMP3Q15836 100 aa9.9□□□□□ -0.83
HMGCS2-201ENST00000369406 TRAV9-2A0A087WT02 112 aa9.89□□□□□ -0.83
HMGCS2-201ENST00000369406 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.89□□□□□ -0.83
HMGCS2-201ENST00000369406 MRPL35Q9NZE8 188 aaKnown RBP9.89□□□□□ -0.83
HMGCS2-201ENST00000369406 CIDEAO60543 219 aa9.88□□□□□ -0.83
HMGCS2-201ENST00000369406 HHLA3Q9XRX5 114 aa9.88□□□□□ -0.83
HMGCS2-201ENST00000369406 MRPS16Q9Y3D3 137 aaKnown RBP9.88□□□□□ -0.83
HMGCS2-201ENST00000369406 CRYBA4P53673 196 aa9.88□□□□□ -0.83
HMGCS2-201ENST00000369406 RPL36AP83881 106 aaKnown RBP9.88□□□□□ -0.83
HMGCS2-201ENST00000369406 RPL36ALQ969Q0 106 aaKnown RBP9.88□□□□□ -0.83
HMGCS2-201ENST00000369406 STAB2Q8WWQ8 2551 aa9.88□□□□□ -0.83
HMGCS2-201ENST00000369406 MEGF8Q7Z7M0 2845 aa9.88□□□□□ -0.83
HMGCS2-201ENST00000369406 DAD1P61803 113 aa9.87□□□□□ -0.83
HMGCS2-201ENST00000369406 VSIG2Q96IQ7 327 aa9.87□□□□□ -0.83
HMGCS2-201ENST00000369406 A0A087WX48 190 aa9.86□□□□□ -0.83
HMGCS2-201ENST00000369406 PRSS29PA6NIE9 313 aa9.86□□□□□ -0.83
HMGCS2-201ENST00000369406 HSBP1L1C9JCN9 74 aa9.86□□□□□ -0.83
HMGCS2-201ENST00000369406 RNASE13Q5GAN3 156 aaKnown RBP9.86□□□□□ -0.83
HMGCS2-201ENST00000369406 A0A0J9YY99 117 aa9.86□□□□□ -0.83
HMGCS2-201ENST00000369406 C12orf74Q32Q52 190 aa9.86□□□□□ -0.83
HMGCS2-201ENST00000369406 MRAPQ8TCY5 172 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms