RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 PRSS2P07478 247 aa9.54□□□□□ -0.88
CHD1L-202ENST00000369258 ZFAND6Q6FIF0 208 aa9.54□□□□□ -0.88
CHD1L-202ENST00000369258 APCP25054 2843 aa9.54□□□□□ -0.88
CHD1L-202ENST00000369258 M0QY20 66 aa9.54□□□□□ -0.88
CHD1L-202ENST00000369258 C18orf65Q6ZTR6 163 aa9.54□□□□□ -0.88
CHD1L-202ENST00000369258 TMEM263Q8WUH6 116 aaKnown RBP9.54□□□□□ -0.88
CHD1L-202ENST00000369258 ANAPC13Q9BS18 74 aa9.54□□□□□ -0.88
CHD1L-202ENST00000369258 RHOHQ15669 191 aa9.53□□□□□ -0.88
CHD1L-202ENST00000369258 TEX29Q8N6K0 151 aa9.53□□□□□ -0.88
CHD1L-202ENST00000369258 DCANP1Q8TF63 244 aa9.53□□□□□ -0.88
CHD1L-202ENST00000369258 IGHV3-16A0A0C4DH30 117 aa9.53□□□□□ -0.88
CHD1L-202ENST00000369258 H3BUA1 57 aa9.53□□□□□ -0.88
CHD1L-202ENST00000369258 IGHG2P01859 326 aa9.53□□□□□ -0.88
CHD1L-202ENST00000369258 ZNF22P17026 224 aaPredicted RBP9.53□□□□□ -0.88
CHD1L-202ENST00000369258 RHODO00212 210 aa9.52□□□□□ -0.88
CHD1L-202ENST00000369258 NSUN5P1Q3KNT7 163 aa9.52□□□□□ -0.88
CHD1L-202ENST00000369258 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.52□□□□□ -0.89
CHD1L-202ENST00000369258 A0A0B4J2C4 111 aa9.52□□□□□ -0.89
CHD1L-202ENST00000369258 RBMY1A1P0DJD3 496 aaKnown RBP9.52□□□□□ -0.89
CHD1L-202ENST00000369258 RBMY1CP0DJD4 496 aa9.52□□□□□ -0.89
CHD1L-202ENST00000369258 RBMY1FQ15415 496 aaKnown RBP9.52□□□□□ -0.89
CHD1L-202ENST00000369258 C20orf203Q8NBC4 194 aa9.51□□□□□ -0.89
CHD1L-202ENST00000369258 NTN5Q8WTR8 489 aaPredicted RBP9.51□□□□□ -0.89
CHD1L-202ENST00000369258 C9orf85Q96MD7 179 aa9.51□□□□□ -0.89
CHD1L-202ENST00000369258 FLNAP21333 2647 aaKnown RBP9.51□□□□□ -0.89
CHD1L-202ENST00000369258 ITPR3Q14573 2671 aa9.51□□□□□ -0.89
CHD1L-202ENST00000369258 ATXN8Q156A1 80 aa9.51□□□□□ -0.89
CHD1L-202ENST00000369258 I3L3M4 83 aa9.5□□□□□ -0.89
CHD1L-202ENST00000369258 ATP5J2P56134 94 aa9.5□□□□□ -0.89
CHD1L-202ENST00000369258 LINC01620Q4KN68 170 aa9.5□□□□□ -0.89
CHD1L-202ENST00000369258 Q6ZSN1 163 aa9.5□□□□□ -0.89
CHD1L-202ENST00000369258 ZNF625Q96I27 306 aaPredicted RBP9.5□□□□□ -0.89
CHD1L-202ENST00000369258 IGLV4-3A0A075B6K6 122 aa9.49□□□□□ -0.89
CHD1L-202ENST00000369258 A0A0J9YXY3 114 aa9.49□□□□□ -0.89
CHD1L-202ENST00000369258 IGHV1OR15-1A0A075B7D0 117 aa9.49□□□□□ -0.89
CHD1L-202ENST00000369258 BRI3O95415 125 aa9.49□□□□□ -0.89
CHD1L-202ENST00000369258 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.48□□□□□ -0.89
CHD1L-202ENST00000369258 TEX49A0A1B0GTD5 131 aa9.48□□□□□ -0.89
CHD1L-202ENST00000369258 IGKV2-29A2NJV5 120 aaPredicted RBP9.48□□□□□ -0.89
CHD1L-202ENST00000369258 K7EMT4 169 aa9.48□□□□□ -0.89
CHD1L-202ENST00000369258 M0QXV9 152 aa9.48□□□□□ -0.89
CHD1L-202ENST00000369258 M0R2P5 195 aa9.48□□□□□ -0.89
CHD1L-202ENST00000369258 SNCGO76070 127 aa9.48□□□□□ -0.89
CHD1L-202ENST00000369258 ADAMTSL4-AS1Q5T5F5 129 aa9.48□□□□□ -0.89
CHD1L-202ENST00000369258 A6NDX4 124 aa9.48□□□□□ -0.89
CHD1L-202ENST00000369258 GAGE2BQ13066 116 aa9.48□□□□□ -0.89
CHD1L-202ENST00000369258 GAGE2EQ4V326 116 aa9.48□□□□□ -0.89
CHD1L-202ENST00000369258 GAGE2DQ9UEU5 116 aa9.48□□□□□ -0.89
CHD1L-202ENST00000369258 HIVEP2P31629 2446 aa9.48□□□□□ -0.89
CHD1L-202ENST00000369258 NOTCH2Q04721 2471 aa9.48□□□□□ -0.89
CHD1L-202ENST00000369258 IGHV3-30-3P0DP02 117 aa9.48□□□□□ -0.89
CHD1L-202ENST00000369258 CD28P10747 220 aa9.48□□□□□ -0.89
CHD1L-202ENST00000369258 SNRPD3P62318 126 aaKnown RBP9.48□□□□□ -0.89
CHD1L-202ENST00000369258 C11orf44Q8N8P7 122 aa9.48□□□□□ -0.89
CHD1L-202ENST00000369258 TIMM21Q9BVV7 248 aa9.48□□□□□ -0.89
CHD1L-202ENST00000369258 A0A0J9YX75 114 aa9.47□□□□□ -0.89
CHD1L-202ENST00000369258 CRLF1O75462 422 aa9.47□□□□□ -0.89
CHD1L-202ENST00000369258 IGLV1-40P01703 118 aa9.47□□□□□ -0.89
CHD1L-202ENST00000369258 CITED1Q99966 193 aa9.47□□□□□ -0.89
CHD1L-202ENST00000369258 NDUFA7O95182 113 aa9.47□□□□□ -0.89
CHD1L-202ENST00000369258 DEFB112Q30KQ8 113 aa9.47□□□□□ -0.89
CHD1L-202ENST00000369258 CCL19Q99731 98 aa9.47□□□□□ -0.89
CHD1L-202ENST00000369258 IGHV3OR16-12A0A075B7B8 117 aa9.46□□□□□ -0.89
CHD1L-202ENST00000369258 TRIAP1O43715 76 aa9.46□□□□□ -0.89
CHD1L-202ENST00000369258 CLEC2BQ92478 149 aa9.46□□□□□ -0.9
CHD1L-202ENST00000369258 ODF3Q96PU9 254 aa9.46□□□□□ -0.9
CHD1L-202ENST00000369258 TRAV8-4A0A0B4J246 113 aa9.45□□□□□ -0.9
CHD1L-202ENST00000369258 VWFP04275 2813 aa9.45□□□□□ -0.9
CHD1L-202ENST00000369258 TRAV4A0A0B4J268 109 aa9.45□□□□□ -0.9
CHD1L-202ENST00000369258 TRBV30A0A0K0K1B3 111 aa9.45□□□□□ -0.9
CHD1L-202ENST00000369258 TRBV10-2A0A0K0K1G8 114 aa9.45□□□□□ -0.9
CHD1L-202ENST00000369258 FAM104AQ969W3 186 aa9.45□□□□□ -0.9
CHD1L-202ENST00000369258 GAGE5Q13069 117 aa9.45□□□□□ -0.9
CHD1L-202ENST00000369258 GAGE6Q13070 117 aa9.45□□□□□ -0.9
CHD1L-202ENST00000369258 C2orf82Q6UX34 121 aa9.45□□□□□ -0.9
CHD1L-202ENST00000369258 SLURP1P55000 103 aa9.44□□□□□ -0.9
CHD1L-202ENST00000369258 KHDC1LQ5JSQ8 128 aa9.44□□□□□ -0.9
CHD1L-202ENST00000369258 NDUFA12Q9UI09 145 aa9.44□□□□□ -0.9
CHD1L-202ENST00000369258 CFHR3Q02985 330 aa9.44□□□□□ -0.9
CHD1L-202ENST00000369258 TTC32Q5I0X7 151 aa9.44□□□□□ -0.9
CHD1L-202ENST00000369258 SS18L2Q9UHA2 77 aa9.44□□□□□ -0.9
CHD1L-202ENST00000369258 USP24Q9UPU5 2620 aa9.44□□□□□ -0.9
CHD1L-202ENST00000369258 H3BMM0 161 aa9.43□□□□□ -0.9
CHD1L-202ENST00000369258 UCNP55089 124 aa9.43□□□□□ -0.9
CHD1L-202ENST00000369258 UBE2WQ96B02 151 aa9.43□□□□□ -0.9
CHD1L-202ENST00000369258 PIMREGQ9BSJ6 248 aa9.43□□□□□ -0.9
CHD1L-202ENST00000369258 ITPR2Q14571 2701 aa9.43□□□□□ -0.9
CHD1L-202ENST00000369258 TRGV11A0A075B6L2 103 aa9.43□□□□□ -0.9
CHD1L-202ENST00000369258 B5MCH6 92 aa9.43□□□□□ -0.9
CHD1L-202ENST00000369258 COX6CP09669 75 aa9.43□□□□□ -0.9
CHD1L-202ENST00000369258 DEFB131AP59861 70 aa9.43□□□□□ -0.9
CHD1L-202ENST00000369258 LITAFQ99732 161 aa9.43□□□□□ -0.9
CHD1L-202ENST00000369258 ICOSQ9Y6W8 199 aa9.43□□□□□ -0.9
CHD1L-202ENST00000369258 K7EQG2 157 aa9.42□□□□□ -0.9
CHD1L-202ENST00000369258 MSMBP08118 114 aa9.42□□□□□ -0.9
CHD1L-202ENST00000369258 C3orf56Q8N813 242 aa9.42□□□□□ -0.9
CHD1L-202ENST00000369258 SVIPQ8NHG7 77 aa9.42□□□□□ -0.9
CHD1L-202ENST00000369258 IGHV1-58A0A0C4DH39 117 aa9.42□□□□□ -0.9
CHD1L-202ENST00000369258 RPL13AP40429 203 aaKnown RBP9.42□□□□□ -0.9
CHD1L-202ENST00000369258 NDUFV3P56181 108 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms