RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 LINC00643Q86TS7 51 aa11.65□□□□□ -0.54
SEMA6C-202ENST00000368912 C17orf77Q96MU5 243 aa11.65□□□□□ -0.54
SEMA6C-202ENST00000368912 PSMG3-AS1Q96PY0 264 aa11.65□□□□□ -0.54
SEMA6C-202ENST00000368912 TMEM75Q8N9X5 138 aa11.64□□□□□ -0.55
SEMA6C-202ENST00000368912 J3QQQ9 107 aa11.64□□□□□ -0.55
SEMA6C-202ENST00000368912 CIRBPQ14011 172 aaKnown RBP11.64□□□□□ -0.55
SEMA6C-202ENST00000368912 CLEC2BQ92478 149 aa11.64□□□□□ -0.55
SEMA6C-202ENST00000368912 IGLV2-11P01706 119 aa11.64□□□□□ -0.55
SEMA6C-202ENST00000368912 IGHV4-31P0DP07 118 aa11.64□□□□□ -0.55
SEMA6C-202ENST00000368912 SYNJ2BPP57105 145 aa11.63□□□□□ -0.55
SEMA6C-202ENST00000368912 MOB4Q9Y3A3 225 aa11.63□□□□□ -0.55
SEMA6C-202ENST00000368912 TEX22C9J3V5 150 aa11.63□□□□□ -0.55
SEMA6C-202ENST00000368912 IGHV3-30P01768 117 aa11.63□□□□□ -0.55
SEMA6C-202ENST00000368912 IGHV3-30-5P0DP03 117 aa11.63□□□□□ -0.55
SEMA6C-202ENST00000368912 GP9P14770 177 aa11.63□□□□□ -0.55
SEMA6C-202ENST00000368912 PEMTQ9UBM1 199 aa11.63□□□□□ -0.55
SEMA6C-202ENST00000368912 KMT2BQ9UMN6 2715 aaPredicted RBP11.63□□□□□ -0.55
SEMA6C-202ENST00000368912 H7C423 109 aa11.63□□□□□ -0.55
SEMA6C-202ENST00000368912 NACAE9PAV3 2078 aa11.62□□□□□ -0.55
SEMA6C-202ENST00000368912 IGHV3-64A0A075B6Q5 118 aa11.62□□□□□ -0.55
SEMA6C-202ENST00000368912 ZNF785A8K8V0 405 aa11.62□□□□□ -0.55
SEMA6C-202ENST00000368912 CRYGDP07320 174 aa11.62□□□□□ -0.55
SEMA6C-202ENST00000368912 ERCC8Q13216 396 aa11.62□□□□□ -0.55
SEMA6C-202ENST00000368912 SPANXDQ9BXN6 97 aa11.62□□□□□ -0.55
SEMA6C-202ENST00000368912 FAM240AA0A1B0GVK7 77 aa11.62□□□□□ -0.55
SEMA6C-202ENST00000368912 Q8TAT8 98 aa11.62□□□□□ -0.55
SEMA6C-202ENST00000368912 TRIAP1O43715 76 aa11.61□□□□□ -0.55
SEMA6C-202ENST00000368912 EGR2P11161 476 aaPredicted RBP11.61□□□□□ -0.55
SEMA6C-202ENST00000368912 RNF185Q96GF1 192 aa11.61□□□□□ -0.55
SEMA6C-202ENST00000368912 H3BT86 120 aa11.6□□□□□ -0.55
SEMA6C-202ENST00000368912 MUSTN1Q8IVN3 82 aa11.6□□□□□ -0.55
SEMA6C-202ENST00000368912 IGKV1D-37A0A075B6S9 117 aa11.59□□□□□ -0.55
SEMA6C-202ENST00000368912 P0DMU3 169 aa11.59□□□□□ -0.55
SEMA6C-202ENST00000368912 FAM231AP0DMU4 169 aa11.59□□□□□ -0.55
SEMA6C-202ENST00000368912 FAM231CP0DMU5 169 aa11.59□□□□□ -0.55
SEMA6C-202ENST00000368912 TMEM86BQ8N661 226 aa11.59□□□□□ -0.55
SEMA6C-202ENST00000368912 MAST4O15021 2626 aa11.59□□□□□ -0.55
SEMA6C-202ENST00000368912 IGKV2-40A0A087WW87 121 aaPredicted RBP11.59□□□□□ -0.55
SEMA6C-202ENST00000368912 IGKV2D-40P01614 121 aaPredicted RBP11.59□□□□□ -0.55
SEMA6C-202ENST00000368912 AGPAT4-IT1Q9H0P7 198 aa11.59□□□□□ -0.55
SEMA6C-202ENST00000368912 NPC2P61916 151 aa11.59□□□□□ -0.55
SEMA6C-202ENST00000368912 CRYGBP07316 175 aa11.58□□□□□ -0.55
SEMA6C-202ENST00000368912 DEFB136Q30KP8 78 aa11.58□□□□□ -0.55
SEMA6C-202ENST00000368912 C14orf178Q8N769 122 aaPredicted RBP11.58□□□□□ -0.55
SEMA6C-202ENST00000368912 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.58□□□□□ -0.56
SEMA6C-202ENST00000368912 ACYP1P07311 99 aa11.58□□□□□ -0.56
SEMA6C-202ENST00000368912 SHANK2-AS3Q9BTD1 123 aa11.58□□□□□ -0.56
SEMA6C-202ENST00000368912 IGKV3D-7A0A0C4DH55 119 aa11.57□□□□□ -0.56
SEMA6C-202ENST00000368912 TRBV12-3P01733 135 aa11.57□□□□□ -0.56
SEMA6C-202ENST00000368912 DPH3P1Q9H4G8 78 aa11.57□□□□□ -0.56
SEMA6C-202ENST00000368912 SDIM1Q6ZPB5 146 aa11.57□□□□□ -0.56
SEMA6C-202ENST00000368912 SLC25A29Q8N8R3 303 aa11.57□□□□□ -0.56
SEMA6C-202ENST00000368912 IL17DQ8TAD2 202 aa11.57□□□□□ -0.56
SEMA6C-202ENST00000368912 TRAV12-1A0A0B4J245 112 aa11.57□□□□□ -0.56
SEMA6C-202ENST00000368912 FSTL3O95633 263 aa11.57□□□□□ -0.56
SEMA6C-202ENST00000368912 C5orf56Q8N8D9 126 aa11.57□□□□□ -0.56
SEMA6C-202ENST00000368912 K7EIM0 57 aa11.56□□□□□ -0.56
SEMA6C-202ENST00000368912 MRGPRG-AS1Q2M3A8 158 aa11.56□□□□□ -0.56
SEMA6C-202ENST00000368912 SPANXN1Q5VSR9 72 aa11.56□□□□□ -0.56
SEMA6C-202ENST00000368912 C2orf48Q96LS8 159 aa11.56□□□□□ -0.56
SEMA6C-202ENST00000368912 C11orf86A6NJI1 115 aa11.55□□□□□ -0.56
SEMA6C-202ENST00000368912 IGKV3-20P01619 116 aa11.55□□□□□ -0.56
SEMA6C-202ENST00000368912 C2orf66Q6UXQ4 117 aa11.55□□□□□ -0.56
SEMA6C-202ENST00000368912 TMEM263Q8WUH6 116 aaKnown RBP11.55□□□□□ -0.56
SEMA6C-202ENST00000368912 FANCD2OSQ96PS1 177 aa11.55□□□□□ -0.56
SEMA6C-202ENST00000368912 HIVEP1P15822 2718 aa11.55□□□□□ -0.56
SEMA6C-202ENST00000368912 SMCR5Q8TEV8 140 aa11.55□□□□□ -0.56
SEMA6C-202ENST00000368912 C16orf92Q96LL3 132 aa11.55□□□□□ -0.56
SEMA6C-202ENST00000368912 RNF5Q99942 180 aa11.55□□□□□ -0.56
SEMA6C-202ENST00000368912 TMEM243Q9BU79 118 aa11.55□□□□□ -0.56
SEMA6C-202ENST00000368912 SERP2Q8N6R1 65 aa11.54□□□□□ -0.56
SEMA6C-202ENST00000368912 ICOSQ9Y6W8 199 aa11.54□□□□□ -0.56
SEMA6C-202ENST00000368912 A0A0B4J2C4 111 aa11.54□□□□□ -0.56
SEMA6C-202ENST00000368912 IGKV1-17P01599 117 aa11.54□□□□□ -0.56
SEMA6C-202ENST00000368912 ORMDL2Q53FV1 153 aa11.54□□□□□ -0.56
SEMA6C-202ENST00000368912 NPBQ8NG41 125 aa11.54□□□□□ -0.56
SEMA6C-202ENST00000368912 C9orf85Q96MD7 179 aa11.53□□□□□ -0.56
SEMA6C-202ENST00000368912 RPL18AQ02543 176 aaKnown RBP11.53□□□□□ -0.56
SEMA6C-202ENST00000368912 NEXN-AS1Q8NBZ9 246 aa11.53□□□□□ -0.56
SEMA6C-202ENST00000368912 TRBV19A0A075B6N1 114 aa11.53□□□□□ -0.56
SEMA6C-202ENST00000368912 I3L2K1 104 aa11.53□□□□□ -0.56
SEMA6C-202ENST00000368912 THAP8Q8NA92 274 aa11.52□□□□□ -0.56
SEMA6C-202ENST00000368912 RETNQ9HD89 108 aa11.52□□□□□ -0.57
SEMA6C-202ENST00000368912 DEFB1P60022 68 aa11.51□□□□□ -0.57
SEMA6C-202ENST00000368912 HIST1H4AP62805 103 aaKnown RBP11.51□□□□□ -0.57
SEMA6C-202ENST00000368912 ZFHX3Q15911 3703 aa11.51□□□□□ -0.57
SEMA6C-202ENST00000368912 MGPP08493 103 aa11.51□□□□□ -0.57
SEMA6C-202ENST00000368912 SMIM2Q9BVW6 85 aa11.51□□□□□ -0.57
SEMA6C-202ENST00000368912 ADARB2-AS1A8MUL3 147 aa11.5□□□□□ -0.57
SEMA6C-202ENST00000368912 A0A087WVE0 104 aa11.5□□□□□ -0.57
SEMA6C-202ENST00000368912 TSPEAR-AS2P59090 65 aa11.5□□□□□ -0.57
SEMA6C-202ENST00000368912 TRBV30A0A0K0K1B3 111 aa11.5□□□□□ -0.57
SEMA6C-202ENST00000368912 INAFM1C9JVW0 142 aa11.5□□□□□ -0.57
SEMA6C-202ENST00000368912 HTN1P15515 57 aa11.49□□□□□ -0.57
SEMA6C-202ENST00000368912 ZNF80P51504 273 aaPredicted RBP11.49□□□□□ -0.57
SEMA6C-202ENST00000368912 RNF182Q8N6D2 247 aa11.49□□□□□ -0.57
SEMA6C-202ENST00000368912 TRBV7-1A0A0A6YYK4 115 aa11.49□□□□□ -0.57
SEMA6C-202ENST00000368912 IGLV11-55A0A075B6I3 123 aa11.49□□□□□ -0.57
SEMA6C-202ENST00000368912 IGLV2-18A0A075B6J9 118 aa11.49□□□□□ -0.57
SEMA6C-202ENST00000368912 PAPPA-AS1Q5QFB9 102 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms