RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 TRAV12-3A0A0B4J271 114 aa-3.46□□□□□ -2.96
RNU4-40P-201ENST00000364351 TRBV27A0A0K0K1C4 114 aa-3.46□□□□□ -2.96
RNU4-40P-201ENST00000364351 FAM92AA1XBS5 289 aa-3.46□□□□□ -2.96
RNU4-40P-201ENST00000364351 SMIM6P0DI80 62 aa-3.46□□□□□ -2.96
RNU4-40P-201ENST00000364351 UBE2D3P61077 147 aa-3.46□□□□□ -2.96
RNU4-40P-201ENST00000364351 UBE2D2P62837 147 aa-3.46□□□□□ -2.96
RNU4-40P-201ENST00000364351 SNX29P2Q8IUI4 249 aa-3.46□□□□□ -2.96
RNU4-40P-201ENST00000364351 MAP3K1Q13233 1512 aa-3.47□□□□□ -2.96
RNU4-40P-201ENST00000364351 A0A087WVE0 104 aa-3.47□□□□□ -2.96
RNU4-40P-201ENST00000364351 H7C1C5 153 aa-3.47□□□□□ -2.96
RNU4-40P-201ENST00000364351 PGRMC1O00264 195 aaKnown RBP-3.47□□□□□ -2.96
RNU4-40P-201ENST00000364351 CETN3O15182 167 aa-3.47□□□□□ -2.96
RNU4-40P-201ENST00000364351 LCN6P62502 163 aa-3.47□□□□□ -2.96
RNU4-40P-201ENST00000364351 GNG5P63218 68 aa-3.47□□□□□ -2.96
RNU4-40P-201ENST00000364351 CCDC42Q96M95 316 aa-3.47□□□□□ -2.96
RNU4-40P-201ENST00000364351 PCF11O94913 1555 aaKnown RBP-3.47□□□□□ -2.97
RNU4-40P-201ENST00000364351 LRRC37A2A6NM11 1700 aa-3.47□□□□□ -2.97
RNU4-40P-201ENST00000364351 PNMA8CA0A1B0GUJ8 204 aa-3.48□□□□□ -2.97
RNU4-40P-201ENST00000364351 LSM3P62310 102 aaKnown RBP-3.48□□□□□ -2.97
RNU4-40P-201ENST00000364351 TMEM91Q6ZNR0 172 aa-3.48□□□□□ -2.97
RNU4-40P-201ENST00000364351 NUP35Q8NFH5 326 aa-3.48□□□□□ -2.97
RNU4-40P-201ENST00000364351 CARD19Q96LW7 228 aa-3.48□□□□□ -2.97
RNU4-40P-201ENST00000364351 SDC2P34741 201 aa-3.49□□□□□ -2.97
RNU4-40P-201ENST00000364351 MRPS15P82914 257 aaKnown RBP-3.49□□□□□ -2.97
RNU4-40P-201ENST00000364351 PRNDQ9UKY0 176 aa-3.49□□□□□ -2.97
RNU4-40P-201ENST00000364351 FER1L6Q2WGJ9 1857 aa-3.5□□□□□ -2.97
RNU4-40P-201ENST00000364351 PPP1R2P41236 205 aa-3.5□□□□□ -2.97
RNU4-40P-201ENST00000364351 PCBD1P61457 104 aa-3.5□□□□□ -2.97
RNU4-40P-201ENST00000364351 SSR3Q9UNL2 185 aa-3.5□□□□□ -2.97
RNU4-40P-201ENST00000364351 HBDP02042 147 aa-3.51□□□□□ -2.97
RNU4-40P-201ENST00000364351 TRAV13-1A0A0B4J241 112 aa-3.52□□□□□ -2.97
RNU4-40P-201ENST00000364351 TRDV1A0A1B0GX56 115 aa-3.52□□□□□ -2.97
RNU4-40P-201ENST00000364351 PPP5D1E7EU14 171 aa-3.52□□□□□ -2.97
RNU4-40P-201ENST00000364351 GABARAPH6UMI1 98 aa-3.52□□□□□ -2.97
RNU4-40P-201ENST00000364351 CSN2P05814 226 aa-3.52□□□□□ -2.97
RNU4-40P-201ENST00000364351 CRYGSP22914 178 aa-3.52□□□□□ -2.97
RNU4-40P-201ENST00000364351 SRP9P49458 86 aaKnown RBP-3.52□□□□□ -2.97
RNU4-40P-201ENST00000364351 PLGLB1Q02325 96 aa-3.52□□□□□ -2.97
RNU4-40P-201ENST00000364351 CLPSL2Q6UWE3 100 aa-3.52□□□□□ -2.97
RNU4-40P-201ENST00000364351 LINC00305Q7Z4B0 112 aa-3.52□□□□□ -2.97
RNU4-40P-201ENST00000364351 DYNLRB2Q8TF09 96 aa-3.52□□□□□ -2.97
RNU4-40P-201ENST00000364351 SBF2Q86WG5 1849 aa-3.52□□□□□ -2.97
RNU4-40P-201ENST00000364351 TECPR2O15040 1411 aa-3.53□□□□□ -2.97
RNU4-40P-201ENST00000364351 CLPSL1A2RUU4 121 aa-3.53□□□□□ -2.97
RNU4-40P-201ENST00000364351 S100A6P06703 90 aa-3.53□□□□□ -2.97
RNU4-40P-201ENST00000364351 USMG5Q96IX5 58 aa-3.53□□□□□ -2.97
RNU4-40P-201ENST00000364351 LYRM2Q9NU23 88 aaPredicted RBP-3.53□□□□□ -2.97
RNU4-40P-201ENST00000364351 CICQ96RK0 1608 aaPredicted RBP-3.54□□□□□ -2.98
RNU4-40P-201ENST00000364351 E2F6O75461 281 aa-3.54□□□□□ -2.98
RNU4-40P-201ENST00000364351 RPP14O95059 124 aaKnown RBP-3.54□□□□□ -2.98
RNU4-40P-201ENST00000364351 RPS17P08708 135 aaKnown RBP-3.54□□□□□ -2.98
RNU4-40P-201ENST00000364351 CRYBA4P53673 196 aa-3.54□□□□□ -2.98
RNU4-40P-201ENST00000364351 TMED2Q15363 201 aa-3.54□□□□□ -2.98
RNU4-40P-201ENST00000364351 STX19Q8N4C7 294 aa-3.54□□□□□ -2.98
RNU4-40P-201ENST00000364351 C9orf16Q9BUW7 83 aa-3.54□□□□□ -2.98
RNU4-40P-201ENST00000364351 ZFYVE9O95405 1425 aa-3.54□□□□□ -2.98
RNU4-40P-201ENST00000364351 MRC1P22897 1456 aa-3.54□□□□□ -2.98
RNU4-40P-201ENST00000364351 MGAQ8IWI9 3026 aa-3.54□□□□□ -2.98
RNU4-40P-201ENST00000364351 TPM3P06753 285 aa-3.55□□□□□ -2.98
RNU4-40P-201ENST00000364351 LSM6P62312 80 aaKnown RBP-3.55□□□□□ -2.98
RNU4-40P-201ENST00000364351 SH3BGRL3Q9H299 93 aa-3.55□□□□□ -2.98
RNU4-40P-201ENST00000364351 KIAA0556O60303 1618 aa-3.55□□□□□ -2.98
RNU4-40P-201ENST00000364351 NUP210Q8TEM1 1887 aaPredicted RBP-3.56□□□□□ -2.98
RNU4-40P-201ENST00000364351 H3BMG7 143 aa-3.56□□□□□ -2.98
RNU4-40P-201ENST00000364351 LTC4SQ16873 150 aa-3.56□□□□□ -2.98
RNU4-40P-201ENST00000364351 AKR1C8PQ5T2L2 129 aa-3.56□□□□□ -2.98
RNU4-40P-201ENST00000364351 Q6JHZ5 121 aa-3.56□□□□□ -2.98
RNU4-40P-201ENST00000364351 SMIM4Q8WVI0 70 aa-3.56□□□□□ -2.98
RNU4-40P-201ENST00000364351 METTL1Q9UBP6 276 aaKnown RBP-3.56□□□□□ -2.98
RNU4-40P-201ENST00000364351 CCDC179H3BU77 68 aa-3.57□□□□□ -2.98
RNU4-40P-201ENST00000364351 LRRC37A3O60309 1634 aa-3.57□□□□□ -2.98
RNU4-40P-201ENST00000364351 PITX3O75364 302 aa-3.57□□□□□ -2.98
RNU4-40P-201ENST00000364351 HMGXB3Q12766 1538 aa-3.57□□□□□ -2.98
RNU4-40P-201ENST00000364351 HSD17B12Q53GQ0 312 aa-3.57□□□□□ -2.98
RNU4-40P-201ENST00000364351 BCORQ6W2J9 1755 aa-3.57□□□□□ -2.98
RNU4-40P-201ENST00000364351 SELENOSQ9BQE4 189 aa-3.57□□□□□ -2.98
RNU4-40P-201ENST00000364351 UFC1Q9Y3C8 167 aa-3.57□□□□□ -2.98
RNU4-40P-201ENST00000364351 PAPPA2Q9BXP8 1791 aa-3.58□□□□□ -2.98
RNU4-40P-201ENST00000364351 FMN2Q9NZ56 1722 aa-3.58□□□□□ -2.98
RNU4-40P-201ENST00000364351 MYOM3Q5VTT5 1437 aa-3.58□□□□□ -2.98
RNU4-40P-201ENST00000364351 SMG6Q86US8 1419 aaKnown RBP-3.58□□□□□ -2.98
RNU4-40P-201ENST00000364351 SMIM23A6NLE4 172 aa-3.58□□□□□ -2.98
RNU4-40P-201ENST00000364351 LLPHQ9BRT6 129 aaKnown RBP-3.58□□□□□ -2.98
RNU4-40P-201ENST00000364351 SLC35B3Q9H1N7 401 aa-3.58□□□□□ -2.98
RNU4-40P-201ENST00000364351 F8VRH5 84 aa-3.59□□□□□ -2.98
RNU4-40P-201ENST00000364351 CST2P09228 141 aa-3.59□□□□□ -2.98
RNU4-40P-201ENST00000364351 UBE2D1P51668 147 aa-3.59□□□□□ -2.98
RNU4-40P-201ENST00000364351 CCL18P55774 89 aa-3.59□□□□□ -2.98
RNU4-40P-201ENST00000364351 C9orf116Q5BN46 136 aaPredicted RBP-3.59□□□□□ -2.98
RNU4-40P-201ENST00000364351 ARMC1Q9NVT9 282 aa-3.59□□□□□ -2.98
RNU4-40P-201ENST00000364351 ARHGEF5Q12774 1597 aa-3.59□□□□□ -2.98
RNU4-40P-201ENST00000364351 MED23Q9ULK4 1368 aa-3.6□□□□□ -2.99
RNU4-40P-201ENST00000364351 CENPEQ02224 2701 aa-3.6□□□□□ -2.99
RNU4-40P-201ENST00000364351 FGF7P21781 194 aa-3.6□□□□□ -2.99
RNU4-40P-201ENST00000364351 SPA17Q15506 151 aa-3.6□□□□□ -2.99
RNU4-40P-201ENST00000364351 POLA1P09884 1462 aaPredicted RBP-3.6□□□□□ -2.99
RNU4-40P-201ENST00000364351 SPEGQ15772 3267 aa-3.61□□□□□ -2.99
RNU4-40P-201ENST00000364351 MUC22E2RYF6 1773 aaPredicted RBP-3.61□□□□□ -2.99
RNU4-40P-201ENST00000364351 ADCY9O60503 1353 aa-3.61□□□□□ -2.99
RNU4-40P-201ENST00000364351 TRBV7-6A0A0J9YX20 115 aa-3.61□□□□□ -2.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms