RNA–Protein interactions for RNA: ENST00000363192.1

RNU4-58P-201, Transcript of RNA, U4 small nuclear 58, pseudogene, humanhuman

BASIC

Gene RNU4-58P, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-58P-201ENST00000363192 HIST1H1BP16401 226 aaKnown RBP-1.4□□□□□ -2.63
RNU4-58P-201ENST00000363192 CCL18P55774 89 aa-1.4□□□□□ -2.63
RNU4-58P-201ENST00000363192 GNG3P63215 75 aa-1.4□□□□□ -2.63
RNU4-58P-201ENST00000363192 RGS21Q2M5E4 152 aa-1.4□□□□□ -2.63
RNU4-58P-201ENST00000363192 PTRHD1Q6GMV3 140 aaKnown RBP-1.4□□□□□ -2.63
RNU4-58P-201ENST00000363192 SMIM20Q8N5G0 67 aa-1.4□□□□□ -2.63
RNU4-58P-201ENST00000363192 FAM24BQ8N5W8 94 aa-1.4□□□□□ -2.63
RNU4-58P-201ENST00000363192 C10orf82Q8WW14 230 aa-1.4□□□□□ -2.63
RNU4-58P-201ENST00000363192 NOP16Q9Y3C1 178 aaKnown RBP-1.4□□□□□ -2.63
RNU4-58P-201ENST00000363192 MED31Q9Y3C7 131 aa-1.4□□□□□ -2.63
RNU4-58P-201ENST00000363192 MED23Q9ULK4 1368 aa-1.4□□□□□ -2.63
RNU4-58P-201ENST00000363192 ACACAQ13085 2346 aa-1.4□□□□□ -2.63
RNU4-58P-201ENST00000363192 KIF21AQ7Z4S6 1674 aa-1.41□□□□□ -2.63
RNU4-58P-201ENST00000363192 Q6JHZ5 121 aa-1.41□□□□□ -2.64
RNU4-58P-201ENST00000363192 ATP11AUNQ6ZP68 121 aa-1.41□□□□□ -2.64
RNU4-58P-201ENST00000363192 DYDC1Q8WWB3 177 aa-1.41□□□□□ -2.64
RNU4-58P-201ENST00000363192 NDUFA12Q9UI09 145 aa-1.41□□□□□ -2.64
RNU4-58P-201ENST00000363192 DOCK2Q92608 1830 aa-1.41□□□□□ -2.64
RNU4-58P-201ENST00000363192 TULP4Q9NRJ4 1543 aa-1.41□□□□□ -2.64
RNU4-58P-201ENST00000363192 YTHDC2Q9H6S0 1430 aaKnown RBP-1.41□□□□□ -2.64
RNU4-58P-201ENST00000363192 J3QLW9 94 aa-1.42□□□□□ -2.64
RNU4-58P-201ENST00000363192 SMIM6P0DI80 62 aa-1.42□□□□□ -2.64
RNU4-58P-201ENST00000363192 LINC01545Q5VT33 79 aa-1.42□□□□□ -2.64
RNU4-58P-201ENST00000363192 PPP1R14BQ96C90 147 aa-1.42□□□□□ -2.64
RNU4-58P-201ENST00000363192 TRAPPC2LQ9UL33 140 aa-1.42□□□□□ -2.64
RNU4-58P-201ENST00000363192 PLECQ15149 4684 aaKnown RBP-1.42□□□□□ -2.64
RNU4-58P-201ENST00000363192 BTAF1O14981 1849 aa-1.43□□□□□ -2.64
RNU4-58P-201ENST00000363192 MRC1P22897 1456 aa-1.43□□□□□ -2.64
RNU4-58P-201ENST00000363192 PXDNQ92626 1479 aa-1.43□□□□□ -2.64
RNU4-58P-201ENST00000363192 HMGXB3Q12766 1538 aa-1.43□□□□□ -2.64
RNU4-58P-201ENST00000363192 M0R135 149 aa-1.43□□□□□ -2.64
RNU4-58P-201ENST00000363192 NCR2O95944 276 aa-1.43□□□□□ -2.64
RNU4-58P-201ENST00000363192 POLR2HP52434 150 aaKnown RBP-1.43□□□□□ -2.64
RNU4-58P-201ENST00000363192 TMED4Q7Z7H5 227 aa-1.43□□□□□ -2.64
RNU4-58P-201ENST00000363192 C9orf62Q8N4C0 152 aa-1.43□□□□□ -2.64
RNU4-58P-201ENST00000363192 SMIM4Q8WVI0 70 aa-1.43□□□□□ -2.64
RNU4-58P-201ENST00000363192 MAFIPQ8WZ33 124 aa-1.43□□□□□ -2.64
RNU4-58P-201ENST00000363192 APLNQ9ULZ1 77 aa-1.43□□□□□ -2.64
RNU4-58P-201ENST00000363192 TROQ12816 1431 aaPredicted RBP-1.43□□□□□ -2.64
RNU4-58P-201ENST00000363192 PATJQ8NI35 1801 aa-1.43□□□□□ -2.64
RNU4-58P-201ENST00000363192 E7EQ34 232 aa-1.44□□□□□ -2.64
RNU4-58P-201ENST00000363192 NIPSNAP2O75323 286 aa-1.44□□□□□ -2.64
RNU4-58P-201ENST00000363192 PIRTP0C851 137 aa-1.44□□□□□ -2.64
RNU4-58P-201ENST00000363192 RPL7P18124 248 aaKnown RBP-1.44□□□□□ -2.64
RNU4-58P-201ENST00000363192 PSPHP78330 225 aa-1.44□□□□□ -2.64
RNU4-58P-201ENST00000363192 DCUN1D2Q6PH85 259 aa-1.44□□□□□ -2.64
RNU4-58P-201ENST00000363192 THEM6Q8WUY1 208 aa-1.44□□□□□ -2.64
RNU4-58P-201ENST00000363192 RPRMQ9NS64 109 aa-1.44□□□□□ -2.64
RNU4-58P-201ENST00000363192 REV3LO60673 3130 aa-1.44□□□□□ -2.64
RNU4-58P-201ENST00000363192 ERCC6Q03468 1493 aa-1.44□□□□□ -2.64
RNU4-58P-201ENST00000363192 WDR87Q6ZQQ6 2873 aa-1.45□□□□□ -2.64
RNU4-58P-201ENST00000363192 USP9XQ93008 2570 aaPredicted RBP-1.45□□□□□ -2.64
RNU4-58P-201ENST00000363192 CDK5RAP2Q96SN8 1893 aa-1.45□□□□□ -2.64
RNU4-58P-201ENST00000363192 SYNMO15061 1565 aa-1.45□□□□□ -2.64
RNU4-58P-201ENST00000363192 MGAM2Q2M2H8 2515 aa-1.45□□□□□ -2.64
RNU4-58P-201ENST00000363192 HLA-DRB4P13762 266 aa-1.45□□□□□ -2.64
RNU4-58P-201ENST00000363192 MT1HP80294 61 aa-1.45□□□□□ -2.64
RNU4-58P-201ENST00000363192 TMEM78Q5T7P6 136 aa-1.45□□□□□ -2.64
RNU4-58P-201ENST00000363192 ZNF818PQ6ZRF7 136 aa-1.45□□□□□ -2.64
RNU4-58P-201ENST00000363192 CCDC32Q9BV29 185 aa-1.45□□□□□ -2.64
RNU4-58P-201ENST00000363192 LSM2Q9Y333 95 aaKnown RBP-1.45□□□□□ -2.64
RNU4-58P-201ENST00000363192 LINC00312Q9Y6C7 94 aa-1.45□□□□□ -2.64
RNU4-58P-201ENST00000363192 HLA-DRB4X5D2U9 266 aa-1.45□□□□□ -2.64
RNU4-58P-201ENST00000363192 APOBP04114 4563 aaKnown RBP-1.45□□□□□ -2.64
RNU4-58P-201ENST00000363192 PKD1L2Q7Z442 2459 aa-1.45□□□□□ -2.64
RNU4-58P-201ENST00000363192 ARHGEF12Q9NZN5 1544 aa-1.45□□□□□ -2.64
RNU4-58P-201ENST00000363192 DNAH11Q96DT5 4516 aa-1.46□□□□□ -2.64
RNU4-58P-201ENST00000363192 COL12A1Q99715 3063 aa-1.46□□□□□ -2.64
RNU4-58P-201ENST00000363192 BORCS7-ASMTA0A0B4J1R7 106 aa-1.46□□□□□ -2.64
RNU4-58P-201ENST00000363192 CTXND1A0A1B0GTU2 59 aa-1.46□□□□□ -2.64
RNU4-58P-201ENST00000363192 A0A1W2PRE2 83 aa-1.46□□□□□ -2.64
RNU4-58P-201ENST00000363192 FAM107AO95990 144 aa-1.46□□□□□ -2.64
RNU4-58P-201ENST00000363192 RBP4P02753 201 aa-1.46□□□□□ -2.64
RNU4-58P-201ENST00000363192 HSD11B1P28845 292 aa-1.46□□□□□ -2.64
RNU4-58P-201ENST00000363192 TCTAP57738 103 aa-1.46□□□□□ -2.64
RNU4-58P-201ENST00000363192 CLLU1Q5K131 121 aa-1.46□□□□□ -2.64
RNU4-58P-201ENST00000363192 STX12Q86Y82 276 aa-1.46□□□□□ -2.64
RNU4-58P-201ENST00000363192 CEP19Q96LK0 163 aa-1.46□□□□□ -2.64
RNU4-58P-201ENST00000363192 CCDC115Q96NT0 180 aa-1.46□□□□□ -2.64
RNU4-58P-201ENST00000363192 AMELXQ99217 191 aa-1.46□□□□□ -2.64
RNU4-58P-201ENST00000363192 R4GMQ9 66 aa-1.46□□□□□ -2.64
RNU4-58P-201ENST00000363192 NBEAQ8NFP9 2946 aa-1.46□□□□□ -2.64
RNU4-58P-201ENST00000363192 DNAH1Q9P2D7 4330 aa-1.47□□□□□ -2.64
RNU4-58P-201ENST00000363192 TRANK1O15050 2925 aa-1.47□□□□□ -2.64
RNU4-58P-201ENST00000363192 POLA1P09884 1462 aaPredicted RBP-1.47□□□□□ -2.64
RNU4-58P-201ENST00000363192 LINC00959A0A1B0GUT2 108 aa-1.47□□□□□ -2.64
RNU4-58P-201ENST00000363192 CPSF4LA6NMK7 179 aaKnown RBP-1.47□□□□□ -2.64
RNU4-58P-201ENST00000363192 YPEL1O60688 119 aa-1.47□□□□□ -2.64
RNU4-58P-201ENST00000363192 PPP1R17O96001 155 aa-1.47□□□□□ -2.64
RNU4-58P-201ENST00000363192 IFNA17P01571 189 aa-1.47□□□□□ -2.64
RNU4-58P-201ENST00000363192 UBE2G1P62253 170 aa-1.47□□□□□ -2.64
RNU4-58P-201ENST00000363192 REEP5Q00765 189 aa-1.47□□□□□ -2.64
RNU4-58P-201ENST00000363192 TMEM170BQ5T4T1 132 aa-1.47□□□□□ -2.64
RNU4-58P-201ENST00000363192 SPANXN1Q5VSR9 72 aa-1.47□□□□□ -2.64
RNU4-58P-201ENST00000363192 NAA60Q9H7X0 242 aa-1.47□□□□□ -2.64
RNU4-58P-201ENST00000363192 RAPGEF6Q8TEU7 1601 aa-1.48□□□□□ -2.65
RNU4-58P-201ENST00000363192 COL14A1Q05707 1796 aaKnown RBP-1.48□□□□□ -2.65
RNU4-58P-201ENST00000363192 SLIT1O75093 1534 aa-1.48□□□□□ -2.65
RNU4-58P-201ENST00000363192 TRBV7-4A0A0J9YYF1 115 aa-1.48□□□□□ -2.65
RNU4-58P-201ENST00000363192 H3BNG1 76 aa-1.48□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms