RNA–Protein interactions for RNA: ENST00000362773.1

RNU4-90P-201, Transcript of RNA, U4 small nuclear 90, pseudogene, humanhuman

BASIC

Gene RNU4-90P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-90P-201ENST00000362773 TMEM78Q5T7P6 136 aa-2.31□□□□□ -2.78
RNU4-90P-201ENST00000362773 ATP11AUNQ6ZP68 121 aa-2.31□□□□□ -2.78
RNU4-90P-201ENST00000362773 STX12Q86Y82 276 aa-2.31□□□□□ -2.78
RNU4-90P-201ENST00000362773 DEFB105AQ8NG35 78 aa-2.31□□□□□ -2.78
RNU4-90P-201ENST00000362773 C10orf82Q8WW14 230 aa-2.31□□□□□ -2.78
RNU4-90P-201ENST00000362773 PARVGQ9HBI0 331 aa-2.31□□□□□ -2.78
RNU4-90P-201ENST00000362773 LRRC37A2A6NM11 1700 aa-2.31□□□□□ -2.78
RNU4-90P-201ENST00000362773 DNAH11Q96DT5 4516 aa-2.32□□□□□ -2.78
RNU4-90P-201ENST00000362773 COL12A1Q99715 3063 aa-2.32□□□□□ -2.78
RNU4-90P-201ENST00000362773 A0A1W2PRE2 83 aa-2.32□□□□□ -2.78
RNU4-90P-201ENST00000362773 E7EQ34 232 aa-2.32□□□□□ -2.78
RNU4-90P-201ENST00000362773 J3QLW9 94 aa-2.32□□□□□ -2.78
RNU4-90P-201ENST00000362773 RPL7P18124 248 aaKnown RBP-2.32□□□□□ -2.78
RNU4-90P-201ENST00000362773 DEFB123Q8N688 67 aa-2.32□□□□□ -2.78
RNU4-90P-201ENST00000362773 NDUFA12Q9UI09 145 aa-2.32□□□□□ -2.78
RNU4-90P-201ENST00000362773 VPS13BQ7Z7G8 4022 aa-2.32□□□□□ -2.78
RNU4-90P-201ENST00000362773 MYH13Q9UKX3 1938 aa-2.32□□□□□ -2.78
RNU4-90P-201ENST00000362773 FAM107AO95990 144 aa-2.33□□□□□ -2.78
RNU4-90P-201ENST00000362773 LRRC37A3O60309 1634 aa-2.33□□□□□ -2.78
RNU4-90P-201ENST00000362773 PRDM2Q13029 1718 aa-2.34□□□□□ -2.78
RNU4-90P-201ENST00000362773 BORCS7-ASMTA0A0B4J1R7 106 aa-2.34□□□□□ -2.78
RNU4-90P-201ENST00000362773 H0YJX3 145 aa-2.34□□□□□ -2.78
RNU4-90P-201ENST00000362773 TNFP01375 233 aa-2.34□□□□□ -2.78
RNU4-90P-201ENST00000362773 SERPINB1P30740 379 aa-2.34□□□□□ -2.78
RNU4-90P-201ENST00000362773 MRPS25P82663 173 aaKnown RBP-2.34□□□□□ -2.78
RNU4-90P-201ENST00000362773 C9orf116Q5BN46 136 aaPredicted RBP-2.34□□□□□ -2.78
RNU4-90P-201ENST00000362773 LINC01545Q5VT33 79 aa-2.34□□□□□ -2.78
RNU4-90P-201ENST00000362773 TMED4Q7Z7H5 227 aa-2.34□□□□□ -2.78
RNU4-90P-201ENST00000362773 SYNMO15061 1565 aa-2.35□□□□□ -2.79
RNU4-90P-201ENST00000362773 DEFB112Q30KQ8 113 aa-2.35□□□□□ -2.79
RNU4-90P-201ENST00000362773 CCDC115Q96NT0 180 aa-2.35□□□□□ -2.79
RNU4-90P-201ENST00000362773 CMYA5Q8N3K9 4069 aa-2.36□□□□□ -2.79
RNU4-90P-201ENST00000362773 RBP4P02753 201 aa-2.36□□□□□ -2.79
RNU4-90P-201ENST00000362773 HLA-DRB4P13762 266 aa-2.36□□□□□ -2.79
RNU4-90P-201ENST00000362773 CCL18P55774 89 aa-2.36□□□□□ -2.79
RNU4-90P-201ENST00000362773 HLA-DRB4X5D2U9 266 aa-2.36□□□□□ -2.79
RNU4-90P-201ENST00000362773 EIF3AQ14152 1382 aaKnown RBP-2.36□□□□□ -2.79
RNU4-90P-201ENST00000362773 CLLU1Q5K131 121 aa-2.37□□□□□ -2.79
RNU4-90P-201ENST00000362773 HOPXQ9BPY8 73 aaPredicted RBP-2.37□□□□□ -2.79
RNU4-90P-201ENST00000362773 BOLA2Q9H3K6 86 aa-2.37□□□□□ -2.79
RNU4-90P-201ENST00000362773 GAPVD1Q14C86 1478 aa-2.38□□□□□ -2.79
RNU4-90P-201ENST00000362773 APOBP04114 4563 aaKnown RBP-2.38□□□□□ -2.79
RNU4-90P-201ENST00000362773 RPRMQ9NS64 109 aa-2.38□□□□□ -2.79
RNU4-90P-201ENST00000362773 LSM2Q9Y333 95 aaKnown RBP-2.38□□□□□ -2.79
RNU4-90P-201ENST00000362773 ERCC6Q03468 1493 aa-2.39□□□□□ -2.79
RNU4-90P-201ENST00000362773 NSD3Q9BZ95 1437 aa-2.39□□□□□ -2.79
RNU4-90P-201ENST00000362773 SBF2Q86WG5 1849 aa-2.39□□□□□ -2.79
RNU4-90P-201ENST00000362773 YPEL1O60688 119 aa-2.39□□□□□ -2.79
RNU4-90P-201ENST00000362773 SMIM4Q8WVI0 70 aa-2.39□□□□□ -2.79
RNU4-90P-201ENST00000362773 CASKIN1Q8WXD9 1431 aa-2.4□□□□□ -2.79
RNU4-90P-201ENST00000362773 M0R135 149 aa-2.4□□□□□ -2.79
RNU4-90P-201ENST00000362773 MT-ND4LP03901 98 aa-2.4□□□□□ -2.79
RNU4-90P-201ENST00000362773 MT1AP04731 61 aa-2.4□□□□□ -2.79
RNU4-90P-201ENST00000362773 Q6JHZ5 121 aa-2.4□□□□□ -2.79
RNU4-90P-201ENST00000362773 BANF2Q9H503 90 aa-2.4□□□□□ -2.79
RNU4-90P-201ENST00000362773 RIF1Q5UIP0 2472 aaKnown RBP-2.4□□□□□ -2.79
RNU4-90P-201ENST00000362773 PFDN1O60925 122 aa-2.41□□□□□ -2.8
RNU4-90P-201ENST00000362773 SMIM24O75264 130 aa-2.41□□□□□ -2.8
RNU4-90P-201ENST00000362773 PITX3O75364 302 aa-2.41□□□□□ -2.8
RNU4-90P-201ENST00000362773 PAEPP09466 180 aa-2.41□□□□□ -2.8
RNU4-90P-201ENST00000362773 PIRTP0C851 137 aa-2.41□□□□□ -2.8
RNU4-90P-201ENST00000362773 ZNF818PQ6ZRF7 136 aa-2.41□□□□□ -2.8
RNU4-90P-201ENST00000362773 CALML5Q9NZT1 146 aa-2.41□□□□□ -2.8
RNU4-90P-201ENST00000362773 LINC00312Q9Y6C7 94 aa-2.41□□□□□ -2.8
RNU4-90P-201ENST00000362773 KNL1Q8NG31 2342 aa-2.41□□□□□ -2.8
RNU4-90P-201ENST00000362773 SACSQ9NZJ4 4579 aa-2.42□□□□□ -2.8
RNU4-90P-201ENST00000362773 UBE2G1P62253 170 aa-2.42□□□□□ -2.8
RNU4-90P-201ENST00000362773 SPANXN1Q5VSR9 72 aa-2.42□□□□□ -2.8
RNU4-90P-201ENST00000362773 TMEM244Q5VVB8 128 aa-2.42□□□□□ -2.8
RNU4-90P-201ENST00000362773 MNS1Q8NEH6 495 aa-2.42□□□□□ -2.8
RNU4-90P-201ENST00000362773 OR9Q1Q8NGQ5 310 aa-2.42□□□□□ -2.8
RNU4-90P-201ENST00000362773 OVOS2A0A0G2JMS6 1433 aa-2.42□□□□□ -2.8
RNU4-90P-201ENST00000362773 IFNA17P01571 189 aa-2.43□□□□□ -2.8
RNU4-90P-201ENST00000362773 STOML2Q9UJZ1 356 aa-2.43□□□□□ -2.8
RNU4-90P-201ENST00000362773 LRRK2Q5S007 2527 aa-2.43□□□□□ -2.8
RNU4-90P-201ENST00000362773 CTXND1A0A1B0GTU2 59 aa-2.44□□□□□ -2.8
RNU4-90P-201ENST00000362773 DPM2O94777 84 aa-2.44□□□□□ -2.8
RNU4-90P-201ENST00000362773 VSTM2AQ8TAG5 236 aa-2.44□□□□□ -2.8
RNU4-90P-201ENST00000362773 R4GMQ9 66 aa-2.44□□□□□ -2.8
RNU4-90P-201ENST00000362773 MRC1P22897 1456 aa-2.45□□□□□ -2.8
RNU4-90P-201ENST00000362773 RPL7L1Q6DKI1 246 aaKnown RBP-2.45□□□□□ -2.8
RNU4-90P-201ENST00000362773 PXDNQ92626 1479 aa-2.45□□□□□ -2.8
RNU4-90P-201ENST00000362773 A6NIN4 97 aa-2.46□□□□□ -2.8
RNU4-90P-201ENST00000362773 PPP1R17O96001 155 aa-2.46□□□□□ -2.8
RNU4-90P-201ENST00000362773 TMEM170BQ5T4T1 132 aa-2.46□□□□□ -2.8
RNU4-90P-201ENST00000362773 MAFIPQ8WZ33 124 aa-2.46□□□□□ -2.8
RNU4-90P-201ENST00000362773 LYSTQ99698 3801 aa-2.46□□□□□ -2.8
RNU4-90P-201ENST00000362773 NWD2Q9ULI1 1742 aa-2.46□□□□□ -2.8
RNU4-90P-201ENST00000362773 MTORP42345 2549 aa-2.47□□□□□ -2.8
RNU4-90P-201ENST00000362773 MIC13Q5XKP0 118 aa-2.47□□□□□ -2.8
RNU4-90P-201ENST00000362773 OR8I2Q8N0Y5 310 aa-2.47□□□□□ -2.8
RNU4-90P-201ENST00000362773 SPTSSBQ8NFR3 76 aa-2.47□□□□□ -2.8
RNU4-90P-201ENST00000362773 GID8Q9NWU2 228 aa-2.47□□□□□ -2.8
RNU4-90P-201ENST00000362773 MYH6P13533 1939 aa-2.47□□□□□ -2.8
RNU4-90P-201ENST00000362773 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.47□□□□□ -2.81
RNU4-90P-201ENST00000362773 DNAH7Q8WXX0 4024 aa-2.47□□□□□ -2.81
RNU4-90P-201ENST00000362773 TRBV20-1A0A075B6N2 111 aa-2.48□□□□□ -2.81
RNU4-90P-201ENST00000362773 ATPIF1Q9UII2 106 aa-2.48□□□□□ -2.81
RNU4-90P-201ENST00000362773 APLNQ9ULZ1 77 aa-2.48□□□□□ -2.81
RNU4-90P-201ENST00000362773 ACACAQ13085 2346 aa-2.48□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms