RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 KLLNB2CW77 178 aa14.14□□□□□ -0.15
CMTM3-201ENST00000361909 G3V318 75 aa14.14□□□□□ -0.15
CMTM3-201ENST00000361909 H3BUX3 64 aa14.14□□□□□ -0.15
CMTM3-201ENST00000361909 SPANXCQ9NY87 97 aa14.14□□□□□ -0.15
CMTM3-201ENST00000361909 MAP1AP78559 2803 aaPredicted RBP14.14□□□□□ -0.15
CMTM3-201ENST00000361909 TMEM219Q86XT9 240 aa14.13□□□□□ -0.15
CMTM3-201ENST00000361909 ICOSQ9Y6W8 199 aa14.13□□□□□ -0.15
CMTM3-201ENST00000361909 WFDC11Q8NEX6 87 aa14.13□□□□□ -0.15
CMTM3-201ENST00000361909 SVEP1Q4LDE5 3571 aa14.12□□□□□ -0.15
CMTM3-201ENST00000361909 F5H697 171 aa14.12□□□□□ -0.15
CMTM3-201ENST00000361909 ELANEP08246 267 aa14.12□□□□□ -0.15
CMTM3-201ENST00000361909 SMIM20Q8N5G0 67 aa14.12□□□□□ -0.15
CMTM3-201ENST00000361909 HERV-K104P63124 156 aa14.12□□□□□ -0.15
CMTM3-201ENST00000361909 IMUPQ9GZP8 106 aa14.12□□□□□ -0.15
CMTM3-201ENST00000361909 NBPF19A0A087WUL8 3843 aa14.11□□□□□ -0.15
CMTM3-201ENST00000361909 H7C423 109 aa14.1□□□□□ -0.15
CMTM3-201ENST00000361909 ACYP1P07311 99 aa14.1□□□□□ -0.15
CMTM3-201ENST00000361909 DEFB112Q30KQ8 113 aa14.1□□□□□ -0.15
CMTM3-201ENST00000361909 C19orf54Q5BKX5 351 aa14.1□□□□□ -0.15
CMTM3-201ENST00000361909 C20orf203Q8NBC4 194 aa14.1□□□□□ -0.15
CMTM3-201ENST00000361909 MUC4Q99102 2169 aa14.1□□□□□ -0.15
CMTM3-201ENST00000361909 TRAV41A0A0B4J266 112 aa14.09□□□□□ -0.15
CMTM3-201ENST00000361909 MEIG1Q5JSS6 88 aa14.09□□□□□ -0.15
CMTM3-201ENST00000361909 LITAFQ99732 161 aa14.09□□□□□ -0.15
CMTM3-201ENST00000361909 LST1O00453 97 aa14.09□□□□□ -0.15
CMTM3-201ENST00000361909 BRI3O95415 125 aa14.09□□□□□ -0.15
CMTM3-201ENST00000361909 LY6EQ16553 131 aa14.09□□□□□ -0.15
CMTM3-201ENST00000361909 TMEM101Q96IK0 257 aa14.09□□□□□ -0.15
CMTM3-201ENST00000361909 YAE1D1Q9NRH1 226 aa14.09□□□□□ -0.15
CMTM3-201ENST00000361909 M0QY20 66 aa14.08□□□□□ -0.16
CMTM3-201ENST00000361909 C9orf85Q96MD7 179 aa14.08□□□□□ -0.16
CMTM3-201ENST00000361909 TIMM21Q9BVV7 248 aa14.08□□□□□ -0.16
CMTM3-201ENST00000361909 IGHG2P01859 326 aa14.07□□□□□ -0.16
CMTM3-201ENST00000361909 SHISA2Q6UWI4 295 aa14.07□□□□□ -0.16
CMTM3-201ENST00000361909 PYGO1Q9Y3Y4 419 aa14.07□□□□□ -0.16
CMTM3-201ENST00000361909 CSPG4Q6UVK1 2322 aa14.07□□□□□ -0.16
CMTM3-201ENST00000361909 CREBBPQ92793 2442 aa14.07□□□□□ -0.16
CMTM3-201ENST00000361909 IGLV4-3A0A075B6K6 122 aa14.07□□□□□ -0.16
CMTM3-201ENST00000361909 A0A087WWL8 130 aa14.07□□□□□ -0.16
CMTM3-201ENST00000361909 I3L3M4 83 aa14.07□□□□□ -0.16
CMTM3-201ENST00000361909 IGHV3-30-3P0DP02 117 aa14.07□□□□□ -0.16
CMTM3-201ENST00000361909 MIAQ16674 131 aa14.07□□□□□ -0.16
CMTM3-201ENST00000361909 TMEM95Q3KNT9 176 aa14.07□□□□□ -0.16
CMTM3-201ENST00000361909 ZNF256Q9Y2P7 627 aaPredicted RBP14.07□□□□□ -0.16
CMTM3-201ENST00000361909 CELSR1Q9NYQ6 3014 aa14.07□□□□□ -0.16
CMTM3-201ENST00000361909 PDZD2O15018 2839 aa14.07□□□□□ -0.16
CMTM3-201ENST00000361909 H3BUA1 57 aa14.06□□□□□ -0.16
CMTM3-201ENST00000361909 Q6YL49 198 aa14.06□□□□□ -0.16
CMTM3-201ENST00000361909 JPT2Q9H910 190 aa14.06□□□□□ -0.16
CMTM3-201ENST00000361909 GCN1Q92616 2671 aaKnown RBP14.06□□□□□ -0.16
CMTM3-201ENST00000361909 TIMM17BO60830 172 aa14.05□□□□□ -0.16
CMTM3-201ENST00000361909 MRPS36P82909 103 aaKnown RBP14.05□□□□□ -0.16
CMTM3-201ENST00000361909 UNQ9165/PRO28630Q6UXU0 137 aa14.05□□□□□ -0.16
CMTM3-201ENST00000361909 ZNF580Q9UK33 172 aa14.05□□□□□ -0.16
CMTM3-201ENST00000361909 A0A0J9YXV3 536 aa14.05□□□□□ -0.16
CMTM3-201ENST00000361909 ZNF56Q15929 161 aa14.05□□□□□ -0.16
CMTM3-201ENST00000361909 USMG5Q96IX5 58 aa14.05□□□□□ -0.16
CMTM3-201ENST00000361909 TNFRSF18Q9Y5U5 241 aa14.05□□□□□ -0.16
CMTM3-201ENST00000361909 IGHV1-58A0A0C4DH39 117 aa14.04□□□□□ -0.16
CMTM3-201ENST00000361909 IGHV4-59P01825 116 aa14.04□□□□□ -0.16
CMTM3-201ENST00000361909 ID1P41134 155 aa14.04□□□□□ -0.16
CMTM3-201ENST00000361909 F6UB75 175 aa14.03□□□□□ -0.16
CMTM3-201ENST00000361909 EDA2RQ9HAV5 297 aa14.03□□□□□ -0.16
CMTM3-201ENST00000361909 UNC79Q9P2D8 2635 aa14.03□□□□□ -0.16
CMTM3-201ENST00000361909 IGHV3-64A0A075B6Q5 118 aa14.02□□□□□ -0.16
CMTM3-201ENST00000361909 IGHV3-16A0A0C4DH30 117 aa14.02□□□□□ -0.16
CMTM3-201ENST00000361909 ATP5G1P05496 136 aa14.02□□□□□ -0.16
CMTM3-201ENST00000361909 TMEM61Q8N0U2 210 aa14.02□□□□□ -0.16
CMTM3-201ENST00000361909 ZANQ9Y493 2812 aa14.02□□□□□ -0.17
CMTM3-201ENST00000361909 TRGV11A0A075B6L2 103 aa14.02□□□□□ -0.17
CMTM3-201ENST00000361909 DEFB1P60022 68 aa14.02□□□□□ -0.17
CMTM3-201ENST00000361909 RPL11P62913 178 aaKnown RBP14.02□□□□□ -0.17
CMTM3-201ENST00000361909 BLCAPP62952 87 aa14.02□□□□□ -0.17
CMTM3-201ENST00000361909 FAM74A4Q5TZK3 123 aa14.02□□□□□ -0.17
CMTM3-201ENST00000361909 OPRPNQ99935 248 aaPredicted RBP14.02□□□□□ -0.17
CMTM3-201ENST00000361909 VPREB3Q9UKI3 123 aa14.02□□□□□ -0.17
CMTM3-201ENST00000361909 NDUFA12Q9UI09 145 aa14□□□□□ -0.17
CMTM3-201ENST00000361909 ITPR3Q14573 2671 aa14□□□□□ -0.17
CMTM3-201ENST00000361909 PRSS2P07478 247 aa14□□□□□ -0.17
CMTM3-201ENST00000361909 LINC01587Q99440 93 aa13.99□□□□□ -0.17
CMTM3-201ENST00000361909 CSMD1Q96PZ7 3565 aa13.99□□□□□ -0.17
CMTM3-201ENST00000361909 CD28P10747 220 aa13.99□□□□□ -0.17
CMTM3-201ENST00000361909 RHPN1-AS1Q9BWJ2 59 aa13.99□□□□□ -0.17
CMTM3-201ENST00000361909 TEX15Q9BXT5 2789 aa13.99□□□□□ -0.17
CMTM3-201ENST00000361909 ITPR2Q14571 2701 aa13.98□□□□□ -0.17
CMTM3-201ENST00000361909 TINCRA0A1B0GVN0 87 aa13.98□□□□□ -0.17
CMTM3-201ENST00000361909 VSIG2Q96IQ7 327 aa13.98□□□□□ -0.17
CMTM3-201ENST00000361909 SPXQ9BT56 116 aa13.98□□□□□ -0.17
CMTM3-201ENST00000361909 DAZ1Q9NQZ3 744 aaKnown RBP13.98□□□□□ -0.17
CMTM3-201ENST00000361909 KRTAP1-1Q07627 177 aa13.98□□□□□ -0.17
CMTM3-201ENST00000361909 DEFB104AQ8WTQ1 72 aa13.98□□□□□ -0.17
CMTM3-201ENST00000361909 ZFHX3Q15911 3703 aa13.97□□□□□ -0.17
CMTM3-201ENST00000361909 TRAV12-3A0A0B4J271 114 aa13.97□□□□□ -0.17
CMTM3-201ENST00000361909 LINC00527Q9UJ94 153 aa13.97□□□□□ -0.17
CMTM3-201ENST00000361909 CCDC168Q8NDH2 2452 aa13.96□□□□□ -0.17
CMTM3-201ENST00000361909 TRBV12-3P01733 135 aa13.96□□□□□ -0.17
CMTM3-201ENST00000361909 CLEC2BQ92478 149 aa13.96□□□□□ -0.17
CMTM3-201ENST00000361909 DUX3Q96PT4 197 aa13.96□□□□□ -0.17
CMTM3-201ENST00000361909 CHCHD5Q9BSY4 110 aa13.96□□□□□ -0.17
CMTM3-201ENST00000361909 K7EMT4 169 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms