RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 TIMM17AQ99595 171 aa7.77□□□□□ -1.17
SMC3-201ENST00000361804 C9JAW5 83 aa7.77□□□□□ -1.17
SMC3-201ENST00000361804 KRTAP1-3Q8IUG1 177 aa7.77□□□□□ -1.17
SMC3-201ENST00000361804 DAND5Q8N907 189 aa7.77□□□□□ -1.17
SMC3-201ENST00000361804 FAM104AQ969W3 186 aa7.77□□□□□ -1.17
SMC3-201ENST00000361804 CLUHP3Q96NS8 147 aa7.77□□□□□ -1.17
SMC3-201ENST00000361804 IGLV4-3A0A075B6K6 122 aa7.77□□□□□ -1.17
SMC3-201ENST00000361804 PPP1R17O96001 155 aa7.77□□□□□ -1.17
SMC3-201ENST00000361804 SPINK8P0C7L1 97 aa7.77□□□□□ -1.17
SMC3-201ENST00000361804 PRO1854Q9UHT4 67 aa7.77□□□□□ -1.17
SMC3-201ENST00000361804 TMEM223A0PJW6 202 aa7.76□□□□□ -1.17
SMC3-201ENST00000361804 KRTAP10-9P60411 292 aa7.76□□□□□ -1.17
SMC3-201ENST00000361804 CKS1BP61024 79 aa7.76□□□□□ -1.17
SMC3-201ENST00000361804 TMEM141Q96I45 108 aa7.76□□□□□ -1.17
SMC3-201ENST00000361804 ATP6V0BQ99437 205 aa7.76□□□□□ -1.17
SMC3-201ENST00000361804 PRSS2P07478 247 aa7.76□□□□□ -1.17
SMC3-201ENST00000361804 Q1RN00 199 aa7.76□□□□□ -1.17
SMC3-201ENST00000361804 C20orf203Q8NBC4 194 aa7.76□□□□□ -1.17
SMC3-201ENST00000361804 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.76□□□□□ -1.17
SMC3-201ENST00000361804 IGKV2-29A2NJV5 120 aaPredicted RBP7.76□□□□□ -1.17
SMC3-201ENST00000361804 RHODO00212 210 aa7.76□□□□□ -1.17
SMC3-201ENST00000361804 SLURP1P55000 103 aa7.76□□□□□ -1.17
SMC3-201ENST00000361804 ADAMTSL4-AS1Q5T5F5 129 aa7.76□□□□□ -1.17
SMC3-201ENST00000361804 K7EQG2 157 aa7.75□□□□□ -1.17
SMC3-201ENST00000361804 VCX2Q9H322 139 aa7.75□□□□□ -1.17
SMC3-201ENST00000361804 SNRPD3P62318 126 aaKnown RBP7.75□□□□□ -1.17
SMC3-201ENST00000361804 DNAH3Q8TD57 4116 aa7.75□□□□□ -1.17
SMC3-201ENST00000361804 A0A0U1RRA0 63 aa7.75□□□□□ -1.17
SMC3-201ENST00000361804 CD28P10747 220 aa7.75□□□□□ -1.17
SMC3-201ENST00000361804 Q6ZUT4 128 aa7.75□□□□□ -1.17
SMC3-201ENST00000361804 IGHV3-33P01772 117 aa7.74□□□□□ -1.17
SMC3-201ENST00000361804 HOXD3P31249 432 aaPredicted RBP7.74□□□□□ -1.17
SMC3-201ENST00000361804 TEN1Q86WV5 123 aa7.74□□□□□ -1.17
SMC3-201ENST00000361804 FLNAP21333 2647 aaKnown RBP7.74□□□□□ -1.17
SMC3-201ENST00000361804 H3BUA1 57 aa7.74□□□□□ -1.17
SMC3-201ENST00000361804 IGHV3-30-3P0DP02 117 aa7.74□□□□□ -1.17
SMC3-201ENST00000361804 GATA3P23771 443 aa7.74□□□□□ -1.17
SMC3-201ENST00000361804 DEFB131AP59861 70 aa7.74□□□□□ -1.17
SMC3-201ENST00000361804 TMEM263Q8WUH6 116 aaKnown RBP7.74□□□□□ -1.17
SMC3-201ENST00000361804 RBMY1BA6NDE4 496 aaKnown RBP7.74□□□□□ -1.17
SMC3-201ENST00000361804 RBMY1EA6NEQ0 496 aaKnown RBP7.74□□□□□ -1.17
SMC3-201ENST00000361804 A8MWV9 139 aa7.74□□□□□ -1.17
SMC3-201ENST00000361804 RBMY1DP0C7P1 496 aaKnown RBP7.74□□□□□ -1.17
SMC3-201ENST00000361804 TRBV6-5A0A0K0K1A5 114 aa7.73□□□□□ -1.17
SMC3-201ENST00000361804 I3L3M4 83 aa7.73□□□□□ -1.17
SMC3-201ENST00000361804 PAPPA-AS1Q5QFB9 102 aa7.73□□□□□ -1.17
SMC3-201ENST00000361804 TRAV26-1A0A087WT03 109 aa7.73□□□□□ -1.17
SMC3-201ENST00000361804 A0A0J9YXY3 114 aa7.73□□□□□ -1.17
SMC3-201ENST00000361804 MTORP42345 2549 aa7.73□□□□□ -1.17
SMC3-201ENST00000361804 K7EMT4 169 aa7.73□□□□□ -1.17
SMC3-201ENST00000361804 LEPROTO15243 131 aa7.73□□□□□ -1.17
SMC3-201ENST00000361804 SLC25A20O43772 301 aa7.73□□□□□ -1.17
SMC3-201ENST00000361804 NSUN5P1Q3KNT7 163 aa7.73□□□□□ -1.17
SMC3-201ENST00000361804 TRBV7-9A0A0J9YWB2 115 aa7.72□□□□□ -1.17
SMC3-201ENST00000361804 RPL32P62910 135 aaKnown RBP7.72□□□□□ -1.17
SMC3-201ENST00000361804 TCTEX1D4Q5JR98 221 aa7.72□□□□□ -1.17
SMC3-201ENST00000361804 PPDPFLQ8WWR9 84 aa7.72□□□□□ -1.17
SMC3-201ENST00000361804 NBEAL2Q6ZNJ1 2754 aa7.72□□□□□ -1.17
SMC3-201ENST00000361804 TEX49A0A1B0GTD5 131 aa7.72□□□□□ -1.17
SMC3-201ENST00000361804 CIDEAO60543 219 aa7.72□□□□□ -1.17
SMC3-201ENST00000361804 NDUFA7O95182 113 aa7.72□□□□□ -1.17
SMC3-201ENST00000361804 BRI3O95415 125 aa7.72□□□□□ -1.17
SMC3-201ENST00000361804 NTN5Q8WTR8 489 aaPredicted RBP7.72□□□□□ -1.17
SMC3-201ENST00000361804 ZNF625Q96I27 306 aaPredicted RBP7.72□□□□□ -1.17
SMC3-201ENST00000361804 ERG28Q9UKR5 140 aa7.72□□□□□ -1.17
SMC3-201ENST00000361804 KHDC1LQ5JSQ8 128 aa7.71□□□□□ -1.17
SMC3-201ENST00000361804 C11orf44Q8N8P7 122 aa7.71□□□□□ -1.17
SMC3-201ENST00000361804 GEMIN7Q9H840 131 aaKnown RBP7.71□□□□□ -1.17
SMC3-201ENST00000361804 ACANP16112 2415 aa7.71□□□□□ -1.17
SMC3-201ENST00000361804 TRIAP1O43715 76 aa7.71□□□□□ -1.17
SMC3-201ENST00000361804 CRYBA4P53673 196 aa7.71□□□□□ -1.17
SMC3-201ENST00000361804 IGHV3OR16-12A0A075B7B8 117 aa7.71□□□□□ -1.18
SMC3-201ENST00000361804 TIMM21Q9BVV7 248 aa7.71□□□□□ -1.18
SMC3-201ENST00000361804 A0A1B0GV72 72 aa7.71□□□□□ -1.18
SMC3-201ENST00000361804 FSHBP01225 129 aa7.71□□□□□ -1.18
SMC3-201ENST00000361804 CLEC2BQ92478 149 aa7.71□□□□□ -1.18
SMC3-201ENST00000361804 FN1P02751 2386 aaKnown RBP7.7□□□□□ -1.18
SMC3-201ENST00000361804 B4DSR2 109 aa7.7□□□□□ -1.18
SMC3-201ENST00000361804 CRLF1O75462 422 aa7.7□□□□□ -1.18
SMC3-201ENST00000361804 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.7□□□□□ -1.18
SMC3-201ENST00000361804 LITAFQ99732 161 aa7.7□□□□□ -1.18
SMC3-201ENST00000361804 HELZ2Q9BYK8 2649 aaKnown RBP7.7□□□□□ -1.18
SMC3-201ENST00000361804 LINC00467Q9BRT7 94 aa7.7□□□□□ -1.18
SMC3-201ENST00000361804 SCGB1A1P11684 91 aa7.7□□□□□ -1.18
SMC3-201ENST00000361804 RHOHQ15669 191 aa7.7□□□□□ -1.18
SMC3-201ENST00000361804 ATP6V0E2Q8NHE4 81 aa7.69□□□□□ -1.18
SMC3-201ENST00000361804 M0R2P5 195 aa7.69□□□□□ -1.18
SMC3-201ENST00000361804 RNF183Q96D59 192 aa7.69□□□□□ -1.18
SMC3-201ENST00000361804 TMEM61Q8N0U2 210 aa7.69□□□□□ -1.18
SMC3-201ENST00000361804 NDUFA12Q9UI09 145 aa7.69□□□□□ -1.18
SMC3-201ENST00000361804 TNFRSF18Q9Y5U5 241 aa7.69□□□□□ -1.18
SMC3-201ENST00000361804 LYSTQ99698 3801 aa7.69□□□□□ -1.18
SMC3-201ENST00000361804 TRBV20-1A0A075B6N2 111 aa7.68□□□□□ -1.18
SMC3-201ENST00000361804 SBSPONQ8IVN8 264 aa7.68□□□□□ -1.18
SMC3-201ENST00000361804 IGHV3-53P01767 116 aa7.67□□□□□ -1.18
SMC3-201ENST00000361804 CHCHD7Q9BUK0 85 aa7.67□□□□□ -1.18
SMC3-201ENST00000361804 CDKN2A-AS1Q9UH64 79 aa7.67□□□□□ -1.18
SMC3-201ENST00000361804 COX6A2Q02221 97 aa7.67□□□□□ -1.18
SMC3-201ENST00000361804 UNC79Q9P2D8 2635 aa7.67□□□□□ -1.18
SMC3-201ENST00000361804 TRAV4A0A0B4J268 109 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms