RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 BPY2O14599 106 aa7.43□□□□□ -1.22
CUX1-203ENST00000360264 LECT2O14960 151 aa7.43□□□□□ -1.22
CUX1-203ENST00000360264 TEX22C9J3V5 150 aa7.43□□□□□ -1.22
CUX1-203ENST00000360264 MIAQ16674 131 aa7.43□□□□□ -1.22
CUX1-203ENST00000360264 HIST2H2BDQ6DRA6 164 aa7.43□□□□□ -1.22
CUX1-203ENST00000360264 CRYGDP07320 174 aa7.43□□□□□ -1.22
CUX1-203ENST00000360264 RNF138Q8WVD3 245 aa7.43□□□□□ -1.22
CUX1-203ENST00000360264 WI2-2373I1.2A0A1W2PRP0 233 aa7.43□□□□□ -1.22
CUX1-203ENST00000360264 GRNP28799 593 aaKnown RBP7.42□□□□□ -1.22
CUX1-203ENST00000360264 BAHCC1Q9P281 2608 aa7.42□□□□□ -1.22
CUX1-203ENST00000360264 IGKV3D-7A0A0C4DH55 119 aa7.42□□□□□ -1.22
CUX1-203ENST00000360264 FAM110AQ9BQ89 295 aa7.42□□□□□ -1.22
CUX1-203ENST00000360264 FBXL19-AS1Q494R0 122 aa7.42□□□□□ -1.22
CUX1-203ENST00000360264 RS1O15537 224 aa7.42□□□□□ -1.22
CUX1-203ENST00000360264 COA6Q5JTJ3 125 aaKnown RBP7.42□□□□□ -1.22
CUX1-203ENST00000360264 LOXL1Q08397 574 aaPredicted RBP7.42□□□□□ -1.22
CUX1-203ENST00000360264 HILS1P60008 231 aa7.42□□□□□ -1.22
CUX1-203ENST00000360264 E9PLD3 99 aa7.41□□□□□ -1.22
CUX1-203ENST00000360264 PRB1P04280 392 aa7.41□□□□□ -1.22
CUX1-203ENST00000360264 NPSP0C0P6 89 aa7.41□□□□□ -1.22
CUX1-203ENST00000360264 NFE4Q86UQ8 179 aa7.41□□□□□ -1.22
CUX1-203ENST00000360264 GTSF1Q8WW33 167 aa7.41□□□□□ -1.22
CUX1-203ENST00000360264 DNAJC9-AS1A6NH13 148 aa7.41□□□□□ -1.22
CUX1-203ENST00000360264 LINC01548A6NM66 108 aa7.41□□□□□ -1.22
CUX1-203ENST00000360264 MIR7-3HGQ8N6C7 128 aa7.41□□□□□ -1.22
CUX1-203ENST00000360264 A0A0J9YXV3 536 aa7.41□□□□□ -1.22
CUX1-203ENST00000360264 ZFAND2AQ8N6M9 145 aa7.41□□□□□ -1.22
CUX1-203ENST00000360264 TNFRSF13BO14836 293 aaPredicted RBP7.4□□□□□ -1.22
CUX1-203ENST00000360264 COL4A6Q14031 1691 aa7.4□□□□□ -1.22
CUX1-203ENST00000360264 WIPF3A6NGB9 483 aa7.4□□□□□ -1.22
CUX1-203ENST00000360264 ATP5EP56381 51 aaPredicted RBP7.4□□□□□ -1.22
CUX1-203ENST00000360264 V9GYY9 64 aa7.4□□□□□ -1.22
CUX1-203ENST00000360264 SIRPDQ9H106 197 aa7.4□□□□□ -1.22
CUX1-203ENST00000360264 A0A0J9YX75 114 aa7.4□□□□□ -1.23
CUX1-203ENST00000360264 B5MCH6 92 aa7.4□□□□□ -1.23
CUX1-203ENST00000360264 BLCAPP62952 87 aa7.4□□□□□ -1.23
CUX1-203ENST00000360264 ZNF706Q9Y5V0 76 aaPredicted RBP7.39□□□□□ -1.23
CUX1-203ENST00000360264 SPANXB1Q9NS25 103 aaPredicted RBP7.39□□□□□ -1.23
CUX1-203ENST00000360264 SVIPQ8NHG7 77 aa7.39□□□□□ -1.23
CUX1-203ENST00000360264 CHD6Q8TD26 2715 aa7.39□□□□□ -1.23
CUX1-203ENST00000360264 C7orf33Q8WU49 177 aa7.39□□□□□ -1.23
CUX1-203ENST00000360264 NDUFC1O43677 76 aa7.38□□□□□ -1.23
CUX1-203ENST00000360264 TRAV26-1A0A087WT03 109 aa7.38□□□□□ -1.23
CUX1-203ENST00000360264 RPL39P62891 51 aaKnown RBP7.38□□□□□ -1.23
CUX1-203ENST00000360264 GATA1P15976 413 aaPredicted RBP7.38□□□□□ -1.23
CUX1-203ENST00000360264 MAP6D1Q9H9H5 199 aa7.38□□□□□ -1.23
CUX1-203ENST00000360264 LINC00574Q9H8X3 128 aa7.38□□□□□ -1.23
CUX1-203ENST00000360264 PRORYQ9H606 182 aa7.38□□□□□ -1.23
CUX1-203ENST00000360264 SHISA2Q6UWI4 295 aa7.37□□□□□ -1.23
CUX1-203ENST00000360264 Q6ZSR3 168 aa7.37□□□□□ -1.23
CUX1-203ENST00000360264 ODF3L1Q8IXM7 274 aa7.37□□□□□ -1.23
CUX1-203ENST00000360264 FAM167A-AS1Q96KT0 104 aa7.37□□□□□ -1.23
CUX1-203ENST00000360264 CRYGBP07316 175 aa7.37□□□□□ -1.23
CUX1-203ENST00000360264 A0A087WZ39 114 aa7.37□□□□□ -1.23
CUX1-203ENST00000360264 LINC00643Q86TS7 51 aa7.37□□□□□ -1.23
CUX1-203ENST00000360264 IBA57-AS1B1ANH7 110 aa7.37□□□□□ -1.23
CUX1-203ENST00000360264 MIFP14174 115 aa7.37□□□□□ -1.23
CUX1-203ENST00000360264 DAND5Q8N907 189 aa7.37□□□□□ -1.23
CUX1-203ENST00000360264 DEFB4AO15263 64 aa7.37□□□□□ -1.23
CUX1-203ENST00000360264 MSRB1Q9NZV6 116 aa7.37□□□□□ -1.23
CUX1-203ENST00000360264 UBE2D1P51668 147 aa7.36□□□□□ -1.23
CUX1-203ENST00000360264 PATE2Q6UY27 113 aa7.36□□□□□ -1.23
CUX1-203ENST00000360264 PRB2P02812 416 aaPredicted RBP7.36□□□□□ -1.23
CUX1-203ENST00000360264 ZFP36P26651 326 aaKnown RBP7.36□□□□□ -1.23
CUX1-203ENST00000360264 RITA1Q96K30 269 aa7.36□□□□□ -1.23
CUX1-203ENST00000360264 IGLV1-47P01700 117 aa7.36□□□□□ -1.23
CUX1-203ENST00000360264 LINC00474Q9P2X8 69 aa7.36□□□□□ -1.23
CUX1-203ENST00000360264 TRAV10A0A0B4J240 114 aa7.36□□□□□ -1.23
CUX1-203ENST00000360264 REG3AQ06141 175 aa7.36□□□□□ -1.23
CUX1-203ENST00000360264 DEFB131BA0A096LNP1 70 aa7.36□□□□□ -1.23
CUX1-203ENST00000360264 A6NDX4 124 aa7.36□□□□□ -1.23
CUX1-203ENST00000360264 Q6YL49 198 aa7.36□□□□□ -1.23
CUX1-203ENST00000360264 NBEAL1Q6ZS30 2694 aa7.36□□□□□ -1.23
CUX1-203ENST00000360264 SETXQ7Z333 2677 aaKnown RBP7.36□□□□□ -1.23
CUX1-203ENST00000360264 FXYD2P54710 66 aa7.36□□□□□ -1.23
CUX1-203ENST00000360264 A0A0J9YXY3 114 aa7.35□□□□□ -1.23
CUX1-203ENST00000360264 C20orf203Q8NBC4 194 aa7.35□□□□□ -1.23
CUX1-203ENST00000360264 IGF1P05019 195 aa7.35□□□□□ -1.23
CUX1-203ENST00000360264 ADORA2A-AS1P86434 159 aa7.35□□□□□ -1.23
CUX1-203ENST00000360264 MUC7Q8TAX7 377 aa7.35□□□□□ -1.23
CUX1-203ENST00000360264 ESM1Q9NQ30 184 aa7.35□□□□□ -1.23
CUX1-203ENST00000360264 ANKRD39Q53RE8 183 aa7.35□□□□□ -1.23
CUX1-203ENST00000360264 FAM222AQ5U5X8 452 aa7.35□□□□□ -1.23
CUX1-203ENST00000360264 C19orf71A6NCJ1 209 aa7.35□□□□□ -1.23
CUX1-203ENST00000360264 ARTNQ5T4W7 220 aa7.35□□□□□ -1.23
CUX1-203ENST00000360264 C3orf22Q8N5N4 141 aa7.35□□□□□ -1.23
CUX1-203ENST00000360264 ITPR3Q14573 2671 aa7.35□□□□□ -1.23
CUX1-203ENST00000360264 LINC00322Q6ZN03 302 aaPredicted RBP7.34□□□□□ -1.23
CUX1-203ENST00000360264 FOXI1Q12951 378 aa7.34□□□□□ -1.23
CUX1-203ENST00000360264 Q6ZUT4 128 aa7.34□□□□□ -1.23
CUX1-203ENST00000360264 ODF1Q14990 250 aa7.34□□□□□ -1.23
CUX1-203ENST00000360264 LINC00269Q8N2A0 174 aa7.34□□□□□ -1.23
CUX1-203ENST00000360264 SPRY4Q9C004 299 aa7.34□□□□□ -1.23
CUX1-203ENST00000360264 DHRS4-AS1Q9P1J3 65 aa7.34□□□□□ -1.23
CUX1-203ENST00000360264 ZNF524Q96C55 264 aa7.34□□□□□ -1.23
CUX1-203ENST00000360264 CLEC2BQ92478 149 aa7.34□□□□□ -1.23
CUX1-203ENST00000360264 Q8N7P7 452 aa7.34□□□□□ -1.24
CUX1-203ENST00000360264 TEX15Q9BXT5 2789 aa7.33□□□□□ -1.24
CUX1-203ENST00000360264 FAM19A1Q7Z5A9 133 aa7.33□□□□□ -1.24
CUX1-203ENST00000360264 ASPHD1Q5U4P2 390 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms