RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 A0A0U1RQV1 116 aa7.73□□□□□ -1.17
CLIP1-202ENST00000358808 FAM236DA0A1B0GTK5 79 aa7.73□□□□□ -1.17
CLIP1-202ENST00000358808 FAM236CP0DP71 79 aa7.73□□□□□ -1.17
CLIP1-202ENST00000358808 DCANP1Q8TF63 244 aa7.73□□□□□ -1.17
CLIP1-202ENST00000358808 NOTCH2Q04721 2471 aa7.73□□□□□ -1.17
CLIP1-202ENST00000358808 LY6LH3BQJ8 138 aa7.73□□□□□ -1.17
CLIP1-202ENST00000358808 A0A0J9YX75 114 aa7.73□□□□□ -1.17
CLIP1-202ENST00000358808 FXYD2P54710 66 aa7.73□□□□□ -1.17
CLIP1-202ENST00000358808 WFDC13Q8IUB5 93 aa7.73□□□□□ -1.17
CLIP1-202ENST00000358808 SERP2Q8N6R1 65 aa7.73□□□□□ -1.17
CLIP1-202ENST00000358808 PRYO14603 147 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 ODF1Q14990 250 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 C20orf197Q8N268 126 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 X6R8D5 127 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 OBSL1O75147 1896 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 SLPIP03973 132 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 MIAQ16674 131 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 IGKV2-28A0A075B6P5 120 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 SMIM9A6NGZ8 99 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 C3orf84H3BNL1 204 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 IGKV2D-28P01615 120 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 TTTY13Q9BZ97 58 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 COL4A3Q01955 1670 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 WFDC2Q14508 124 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 ENHOQ6UWT2 76 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 C11orf53Q8IXP5 236 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 LINC00482Q8N8I6 264 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 XAGE1AQ9HD64 81 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 SYCNQ0VAF6 134 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 SDIM1Q6ZPB5 146 aa7.72□□□□□ -1.17
CLIP1-202ENST00000358808 A6NED7 52 aa7.71□□□□□ -1.17
CLIP1-202ENST00000358808 UNQ9165/PRO28630Q6UXU0 137 aa7.71□□□□□ -1.17
CLIP1-202ENST00000358808 C20orf203Q8NBC4 194 aa7.71□□□□□ -1.18
CLIP1-202ENST00000358808 PLA2G2EQ9NZK7 142 aa7.71□□□□□ -1.18
CLIP1-202ENST00000358808 MYLKQ15746 1914 aa7.71□□□□□ -1.18
CLIP1-202ENST00000358808 KIAA1549LQ6ZVL6 1849 aa7.71□□□□□ -1.18
CLIP1-202ENST00000358808 A6NDX4 124 aa7.71□□□□□ -1.18
CLIP1-202ENST00000358808 COA6Q5JTJ3 125 aaKnown RBP7.71□□□□□ -1.18
CLIP1-202ENST00000358808 RNASE8Q8TDE3 154 aaKnown RBP7.71□□□□□ -1.18
CLIP1-202ENST00000358808 NDUFC2-KCTD14E9PQ53 114 aa7.7□□□□□ -1.18
CLIP1-202ENST00000358808 SPATA12Q7Z6I5 190 aa7.7□□□□□ -1.18
CLIP1-202ENST00000358808 TP53TG3Q9ULZ0 132 aa7.7□□□□□ -1.18
CLIP1-202ENST00000358808 PTPRSQ13332 1948 aa7.7□□□□□ -1.18
CLIP1-202ENST00000358808 EML6Q6ZMW3 1958 aa7.7□□□□□ -1.18
CLIP1-202ENST00000358808 PLAC8L1A1L4L8 177 aa7.7□□□□□ -1.18
CLIP1-202ENST00000358808 V9GYY9 64 aa7.7□□□□□ -1.18
CLIP1-202ENST00000358808 CCKP06307 115 aa7.7□□□□□ -1.18
CLIP1-202ENST00000358808 LINC00643Q86TS7 51 aa7.7□□□□□ -1.18
CLIP1-202ENST00000358808 TCL1BO95988 128 aa7.69□□□□□ -1.18
CLIP1-202ENST00000358808 GOLGB1Q14789 3259 aaKnown RBP7.69□□□□□ -1.18
CLIP1-202ENST00000358808 PATE2Q6UY27 113 aa7.69□□□□□ -1.18
CLIP1-202ENST00000358808 Q8N7P7 452 aa7.69□□□□□ -1.18
CLIP1-202ENST00000358808 TNRC6BQ9UPQ9 1833 aaKnown RBP7.69□□□□□ -1.18
CLIP1-202ENST00000358808 NUPR2A6NF83 97 aa7.69□□□□□ -1.18
CLIP1-202ENST00000358808 IGF1P05019 195 aa7.69□□□□□ -1.18
CLIP1-202ENST00000358808 LRRC75A-AS1Q8N1F1 130 aa7.69□□□□□ -1.18
CLIP1-202ENST00000358808 LINC01548A6NM66 108 aa7.68□□□□□ -1.18
CLIP1-202ENST00000358808 LOXL1Q08397 574 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-202ENST00000358808 EP400Q96L91 3159 aa7.68□□□□□ -1.18
CLIP1-202ENST00000358808 SONP18583 2426 aaKnown RBP7.68□□□□□ -1.18
CLIP1-202ENST00000358808 MIFP14174 115 aa7.68□□□□□ -1.18
CLIP1-202ENST00000358808 PIK3CD-AS1Q5SR53 167 aa7.68□□□□□ -1.18
CLIP1-202ENST00000358808 IGLV3-1P01715 115 aa7.68□□□□□ -1.18
CLIP1-202ENST00000358808 A0A1W2PNU3 283 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-202ENST00000358808 FSHBP01225 129 aa7.67□□□□□ -1.18
CLIP1-202ENST00000358808 HIGD1BQ9P298 99 aa7.67□□□□□ -1.18
CLIP1-202ENST00000358808 PRR4Q16378 134 aa7.67□□□□□ -1.18
CLIP1-202ENST00000358808 LINC00467Q9BRT7 94 aa7.67□□□□□ -1.18
CLIP1-202ENST00000358808 DENND4CQ5VZ89 1909 aa7.67□□□□□ -1.18
CLIP1-202ENST00000358808 H7C423 109 aa7.67□□□□□ -1.18
CLIP1-202ENST00000358808 SPANXB1Q9NS25 103 aaPredicted RBP7.67□□□□□ -1.18
CLIP1-202ENST00000358808 ADAMTS9Q9P2N4 1935 aa7.67□□□□□ -1.18
CLIP1-202ENST00000358808 A0A0J9YXY3 114 aa7.67□□□□□ -1.18
CLIP1-202ENST00000358808 RPL37AP8A6NKH3 93 aa7.67□□□□□ -1.18
CLIP1-202ENST00000358808 CACNA1AO00555 2505 aa7.67□□□□□ -1.18
CLIP1-202ENST00000358808 ARHGAP21Q5T5U3 1957 aa7.67□□□□□ -1.18
CLIP1-202ENST00000358808 SRCAPQ6ZRS2 3230 aa7.67□□□□□ -1.18
CLIP1-202ENST00000358808 MYO18BQ8IUG5 2567 aa7.67□□□□□ -1.18
CLIP1-202ENST00000358808 PTH2Q96A98 100 aa7.67□□□□□ -1.18
CLIP1-202ENST00000358808 SPRY4Q9C004 299 aa7.67□□□□□ -1.18
CLIP1-202ENST00000358808 LOC107984640A0A0U1RRK4 108 aa7.66□□□□□ -1.18
CLIP1-202ENST00000358808 ACACBO00763 2458 aa7.66□□□□□ -1.18
CLIP1-202ENST00000358808 Q8NA96 180 aa7.66□□□□□ -1.18
CLIP1-202ENST00000358808 CSPG4Q6UVK1 2322 aa7.66□□□□□ -1.18
CLIP1-202ENST00000358808 G3V4G9 280 aa7.66□□□□□ -1.18
CLIP1-202ENST00000358808 CTRLP40313 264 aa7.66□□□□□ -1.18
CLIP1-202ENST00000358808 DHRS4-AS1Q9P1J3 65 aa7.66□□□□□ -1.18
CLIP1-202ENST00000358808 Q6YL49 198 aa7.65□□□□□ -1.18
CLIP1-202ENST00000358808 ZNF843Q8N446 348 aa7.65□□□□□ -1.18
CLIP1-202ENST00000358808 KMT2EQ8IZD2 1858 aa7.65□□□□□ -1.18
CLIP1-202ENST00000358808 RETNLBQ9BQ08 111 aa7.65□□□□□ -1.18
CLIP1-202ENST00000358808 FRMD6-AS1P0C7T7 363 aa7.65□□□□□ -1.19
CLIP1-202ENST00000358808 DSCAML1Q8TD84 2053 aa7.65□□□□□ -1.19
CLIP1-202ENST00000358808 FREM1Q5H8C1 2179 aa7.65□□□□□ -1.19
CLIP1-202ENST00000358808 ZFAND3Q9H8U3 227 aa7.65□□□□□ -1.19
CLIP1-202ENST00000358808 C19orf84I3L1E1 186 aa7.64□□□□□ -1.19
CLIP1-202ENST00000358808 TNFRSF13BO14836 293 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-202ENST00000358808 SORL1Q92673 2214 aa7.64□□□□□ -1.19
CLIP1-202ENST00000358808 TTC28Q96AY4 2481 aa7.64□□□□□ -1.19
CLIP1-202ENST00000358808 C2CD3Q4AC94 2353 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms