RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 KMT2BQ9UMN6 2715 aaPredicted RBP11.79□□□□□ -0.52
PTPN5-201ENST00000358540 TRAV12-1A0A0B4J245 112 aa11.79□□□□□ -0.52
PTPN5-201ENST00000358540 HERV-K104P63124 156 aa11.79□□□□□ -0.52
PTPN5-201ENST00000358540 TMEM262E9PQX1 116 aa11.79□□□□□ -0.52
PTPN5-201ENST00000358540 KRTAP1-1Q07627 177 aa11.79□□□□□ -0.52
PTPN5-201ENST00000358540 GAGE2BQ13066 116 aa11.79□□□□□ -0.52
PTPN5-201ENST00000358540 GAGE2EQ4V326 116 aa11.79□□□□□ -0.52
PTPN5-201ENST00000358540 NDUFA11Q86Y39 141 aa11.79□□□□□ -0.52
PTPN5-201ENST00000358540 GAGE2DQ9UEU5 116 aa11.79□□□□□ -0.52
PTPN5-201ENST00000358540 NIPBLQ6KC79 2804 aaeCLIP11.78□□□□□ -0.52
PTPN5-201ENST00000358540 RBMY1BA6NDE4 496 aaKnown RBP11.78□□□□□ -0.52
PTPN5-201ENST00000358540 RBMY1EA6NEQ0 496 aaKnown RBP11.78□□□□□ -0.52
PTPN5-201ENST00000358540 NXPH4O95158 308 aa11.78□□□□□ -0.52
PTPN5-201ENST00000358540 RBMY1DP0C7P1 496 aaKnown RBP11.78□□□□□ -0.52
PTPN5-201ENST00000358540 DUSP14O95147 198 aaKnown RBP11.78□□□□□ -0.52
PTPN5-201ENST00000358540 CD28P10747 220 aa11.78□□□□□ -0.52
PTPN5-201ENST00000358540 SMIM20Q8N5G0 67 aa11.78□□□□□ -0.52
PTPN5-201ENST00000358540 PEMTQ9UBM1 199 aa11.78□□□□□ -0.52
PTPN5-201ENST00000358540 EMP1P54849 157 aa11.77□□□□□ -0.52
PTPN5-201ENST00000358540 ODF3Q96PU9 254 aa11.77□□□□□ -0.52
PTPN5-201ENST00000358540 ANK3Q12955 4377 aaKnown RBP11.77□□□□□ -0.52
PTPN5-201ENST00000358540 CCDC179H3BU77 68 aa11.77□□□□□ -0.53
PTPN5-201ENST00000358540 NEXN-AS1Q8NBZ9 246 aa11.77□□□□□ -0.53
PTPN5-201ENST00000358540 ZNF56Q15929 161 aa11.77□□□□□ -0.53
PTPN5-201ENST00000358540 RAX2Q96IS3 184 aa11.77□□□□□ -0.53
PTPN5-201ENST00000358540 C9orf85Q96MD7 179 aa11.77□□□□□ -0.53
PTPN5-201ENST00000358540 TRAV4A0A0B4J268 109 aa11.76□□□□□ -0.53
PTPN5-201ENST00000358540 SNCGO76070 127 aa11.76□□□□□ -0.53
PTPN5-201ENST00000358540 TTC32Q5I0X7 151 aa11.76□□□□□ -0.53
PTPN5-201ENST00000358540 SMR3AQ99954 134 aa11.76□□□□□ -0.53
PTPN5-201ENST00000358540 JMJD1CQ15652 2540 aa11.76□□□□□ -0.53
PTPN5-201ENST00000358540 GAGE12JA6NER3 117 aa11.76□□□□□ -0.53
PTPN5-201ENST00000358540 GAGE7O76087 117 aa11.76□□□□□ -0.53
PTPN5-201ENST00000358540 GAGE12FP0CL80 117 aa11.76□□□□□ -0.53
PTPN5-201ENST00000358540 GAGE12GP0CL81 117 aa11.76□□□□□ -0.53
PTPN5-201ENST00000358540 GAGE12IP0CL82 117 aa11.76□□□□□ -0.53
PTPN5-201ENST00000358540 GAGE4Q13068 117 aa11.76□□□□□ -0.53
PTPN5-201ENST00000358540 CITED1Q99966 193 aa11.76□□□□□ -0.53
PTPN5-201ENST00000358540 IGHV3-73A0A0B4J1V6 119 aa11.75□□□□□ -0.53
PTPN5-201ENST00000358540 C9JAW5 83 aa11.75□□□□□ -0.53
PTPN5-201ENST00000358540 NDUFV3P56181 108 aaKnown RBP11.75□□□□□ -0.53
PTPN5-201ENST00000358540 C2orf66Q6UXQ4 117 aa11.75□□□□□ -0.53
PTPN5-201ENST00000358540 H3BMM0 161 aa11.75□□□□□ -0.53
PTPN5-201ENST00000358540 CRLF1O75462 422 aa11.75□□□□□ -0.53
PTPN5-201ENST00000358540 ZNF876PQ49A33 203 aa11.75□□□□□ -0.53
PTPN5-201ENST00000358540 TMEM86BQ8N661 226 aa11.75□□□□□ -0.53
PTPN5-201ENST00000358540 BAALCQ8WXS3 180 aa11.75□□□□□ -0.53
PTPN5-201ENST00000358540 GCN1Q92616 2671 aaKnown RBP11.75□□□□□ -0.53
PTPN5-201ENST00000358540 H7C2G1 150 aa11.75□□□□□ -0.53
PTPN5-201ENST00000358540 RHODO00212 210 aa11.75□□□□□ -0.53
PTPN5-201ENST00000358540 CFC1BP0CG36 223 aa11.75□□□□□ -0.53
PTPN5-201ENST00000358540 CFC1P0CG37 223 aa11.75□□□□□ -0.53
PTPN5-201ENST00000358540 ORMDL2Q53FV1 153 aa11.75□□□□□ -0.53
PTPN5-201ENST00000358540 CITED2Q99967 270 aaPredicted RBP11.75□□□□□ -0.53
PTPN5-201ENST00000358540 MAP6D1Q9H9H5 199 aa11.75□□□□□ -0.53
PTPN5-201ENST00000358540 SLC25A20O43772 301 aa11.74□□□□□ -0.53
PTPN5-201ENST00000358540 DEFB114Q30KQ6 69 aa11.74□□□□□ -0.53
PTPN5-201ENST00000358540 ZNF256Q9Y2P7 627 aaPredicted RBP11.74□□□□□ -0.53
PTPN5-201ENST00000358540 TRPT1Q86TN4 253 aaKnown RBP11.74□□□□□ -0.53
PTPN5-201ENST00000358540 TOMM6Q96B49 74 aa11.74□□□□□ -0.53
PTPN5-201ENST00000358540 SBSPONQ8IVN8 264 aa11.73□□□□□ -0.53
PTPN5-201ENST00000358540 A0A0J9YY99 117 aa11.72□□□□□ -0.53
PTPN5-201ENST00000358540 SDHAF1A6NFY7 115 aa11.72□□□□□ -0.53
PTPN5-201ENST00000358540 CRYGDP07320 174 aa11.72□□□□□ -0.53
PTPN5-201ENST00000358540 RPL39P62891 51 aaKnown RBP11.72□□□□□ -0.53
PTPN5-201ENST00000358540 C10orf126Q8N4M7 172 aa11.72□□□□□ -0.53
PTPN5-201ENST00000358540 HIVEP2P31629 2446 aa11.72□□□□□ -0.53
PTPN5-201ENST00000358540 RPL32P62910 135 aaKnown RBP11.72□□□□□ -0.53
PTPN5-201ENST00000358540 IFITM1P13164 125 aa11.71□□□□□ -0.53
PTPN5-201ENST00000358540 POM121L12Q8N7R1 296 aa11.71□□□□□ -0.53
PTPN5-201ENST00000358540 CCL24O00175 119 aa11.71□□□□□ -0.53
PTPN5-201ENST00000358540 PRO1854Q9UHT4 67 aa11.71□□□□□ -0.53
PTPN5-201ENST00000358540 PROK1P58294 105 aa11.71□□□□□ -0.54
PTPN5-201ENST00000358540 TP53TG1Q9Y2A0 90 aa11.71□□□□□ -0.54
PTPN5-201ENST00000358540 LINC01006Q8NI28 216 aa11.7□□□□□ -0.54
PTPN5-201ENST00000358540 NTN5Q8WTR8 489 aaPredicted RBP11.7□□□□□ -0.54
PTPN5-201ENST00000358540 TRGV11A0A075B6L2 103 aa11.69□□□□□ -0.54
PTPN5-201ENST00000358540 C11orf86A6NJI1 115 aa11.69□□□□□ -0.54
PTPN5-201ENST00000358540 P0DMU3 169 aa11.69□□□□□ -0.54
PTPN5-201ENST00000358540 FAM231AP0DMU4 169 aa11.69□□□□□ -0.54
PTPN5-201ENST00000358540 FAM231CP0DMU5 169 aa11.69□□□□□ -0.54
PTPN5-201ENST00000358540 POLR2KP53803 58 aaKnown RBP11.69□□□□□ -0.54
PTPN5-201ENST00000358540 IGHV3OR16-12A0A075B7B8 117 aa11.69□□□□□ -0.54
PTPN5-201ENST00000358540 PPP1R17O96001 155 aa11.69□□□□□ -0.54
PTPN5-201ENST00000358540 M0QY20 66 aa11.69□□□□□ -0.54
PTPN5-201ENST00000358540 IGHV3-30P01768 117 aa11.69□□□□□ -0.54
PTPN5-201ENST00000358540 IGHV3-30-5P0DP03 117 aa11.69□□□□□ -0.54
PTPN5-201ENST00000358540 FAM110AQ9BQ89 295 aa11.69□□□□□ -0.54
PTPN5-201ENST00000358540 XCL2Q9UBD3 114 aa11.69□□□□□ -0.54
PTPN5-201ENST00000358540 SETXQ7Z333 2677 aaKnown RBP11.68□□□□□ -0.54
PTPN5-201ENST00000358540 ODF3L2Q3SX64 289 aa11.68□□□□□ -0.54
PTPN5-201ENST00000358540 TMEM170BQ5T4T1 132 aa11.68□□□□□ -0.54
PTPN5-201ENST00000358540 LINC01587Q99440 93 aa11.68□□□□□ -0.54
PTPN5-201ENST00000358540 HERVK_113P61574 105 aa11.67□□□□□ -0.54
PTPN5-201ENST00000358540 VCYO14598 125 aa11.67□□□□□ -0.54
PTPN5-201ENST00000358540 Q9UF83 564 aa11.66□□□□□ -0.54
PTPN5-201ENST00000358540 TSHBP01222 138 aa11.66□□□□□ -0.54
PTPN5-201ENST00000358540 TSPEAR-AS2P59090 65 aa11.66□□□□□ -0.54
PTPN5-201ENST00000358540 TEX49A0A1B0GTD5 131 aa11.66□□□□□ -0.54
PTPN5-201ENST00000358540 Q1RN00 199 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms