RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 PCNX1Q96RV3 2341 aa8.48□□□□□ -1.05
COL11A1-202ENST00000358392 POM121L12Q8N7R1 296 aa8.48□□□□□ -1.05
COL11A1-202ENST00000358392 RETNQ9HD89 108 aa8.47□□□□□ -1.05
COL11A1-202ENST00000358392 TRBV10-1A0A0K0K1A3 114 aa8.47□□□□□ -1.05
COL11A1-202ENST00000358392 SPANXB1Q9NS25 103 aaPredicted RBP8.47□□□□□ -1.05
COL11A1-202ENST00000358392 UFSP1Q6NVU6 142 aa8.47□□□□□ -1.05
COL11A1-202ENST00000358392 TRIAP1O43715 76 aa8.46□□□□□ -1.05
COL11A1-202ENST00000358392 CNOT1A5YKK6 2376 aaKnown RBP8.46□□□□□ -1.06
COL11A1-202ENST00000358392 IGLV2-14P01704 120 aa8.46□□□□□ -1.06
COL11A1-202ENST00000358392 LINC00322Q6ZN03 302 aaPredicted RBP8.46□□□□□ -1.06
COL11A1-202ENST00000358392 MED14OSP0DP75 135 aa8.46□□□□□ -1.06
COL11A1-202ENST00000358392 ODF3L1Q8IXM7 274 aa8.46□□□□□ -1.06
COL11A1-202ENST00000358392 Q8N7P7 452 aa8.46□□□□□ -1.06
COL11A1-202ENST00000358392 C9orf85Q96MD7 179 aa8.46□□□□□ -1.06
COL11A1-202ENST00000358392 CCKP06307 115 aa8.45□□□□□ -1.06
COL11A1-202ENST00000358392 GDF5OSQ5U4N7 250 aa8.45□□□□□ -1.06
COL11A1-202ENST00000358392 A0A0J9YX75 114 aa8.45□□□□□ -1.06
COL11A1-202ENST00000358392 SLX1AQ9BQ83 275 aa8.45□□□□□ -1.06
COL11A1-202ENST00000358392 TIMM17BO60830 172 aa8.45□□□□□ -1.06
COL11A1-202ENST00000358392 LINC00526Q96FQ7 95 aa8.45□□□□□ -1.06
COL11A1-202ENST00000358392 MED12LQ86YW9 2145 aa8.45□□□□□ -1.06
COL11A1-202ENST00000358392 A8MZ25 164 aa8.45□□□□□ -1.06
COL11A1-202ENST00000358392 CDKN2A-AS1Q9UH64 79 aa8.45□□□□□ -1.06
COL11A1-202ENST00000358392 SPTAN1Q13813 2472 aaKnown RBP8.45□□□□□ -1.06
COL11A1-202ENST00000358392 C22orf34Q6ZV56 151 aa8.45□□□□□ -1.06
COL11A1-202ENST00000358392 PROK1P58294 105 aa8.44□□□□□ -1.06
COL11A1-202ENST00000358392 SERP1Q9Y6X1 66 aa8.44□□□□□ -1.06
COL11A1-202ENST00000358392 GVINP1Q7Z2Y8 2422 aa8.44□□□□□ -1.06
COL11A1-202ENST00000358392 MRPS12O15235 138 aaKnown RBP8.44□□□□□ -1.06
COL11A1-202ENST00000358392 MAPKAPK5-AS1Q8N8E1 139 aa8.44□□□□□ -1.06
COL11A1-202ENST00000358392 FAM222AQ5U5X8 452 aa8.44□□□□□ -1.06
COL11A1-202ENST00000358392 TRBV27A0A0K0K1C4 114 aa8.44□□□□□ -1.06
COL11A1-202ENST00000358392 C19orf71A6NCJ1 209 aa8.44□□□□□ -1.06
COL11A1-202ENST00000358392 CCDC179H3BU77 68 aa8.44□□□□□ -1.06
COL11A1-202ENST00000358392 THSD7BQ9C0I4 1608 aa8.44□□□□□ -1.06
COL11A1-202ENST00000358392 MALRD1Q5VYJ5 2156 aa8.44□□□□□ -1.06
COL11A1-202ENST00000358392 ACACAQ13085 2346 aa8.44□□□□□ -1.06
COL11A1-202ENST00000358392 IGLV9-49A0A0B4J1Y8 123 aa8.44□□□□□ -1.06
COL11A1-202ENST00000358392 TMEM223A0PJW6 202 aa8.44□□□□□ -1.06
COL11A1-202ENST00000358392 K7EMT4 169 aa8.44□□□□□ -1.06
COL11A1-202ENST00000358392 IGF1P05019 195 aa8.44□□□□□ -1.06
COL11A1-202ENST00000358392 LINC01548A6NM66 108 aa8.43□□□□□ -1.06
COL11A1-202ENST00000358392 MYCNOSP40205 109 aa8.43□□□□□ -1.06
COL11A1-202ENST00000358392 RPL37AP8A6NKH3 93 aa8.43□□□□□ -1.06
COL11A1-202ENST00000358392 C20orf173Q96LM9 149 aa8.43□□□□□ -1.06
COL11A1-202ENST00000358392 M0R2N4 97 aa8.42□□□□□ -1.06
COL11A1-202ENST00000358392 IGLV2-18A0A075B6J9 118 aa8.42□□□□□ -1.06
COL11A1-202ENST00000358392 ADORA2A-AS1P86434 159 aa8.42□□□□□ -1.06
COL11A1-202ENST00000358392 C14orf177Q52M58 125 aa8.42□□□□□ -1.06
COL11A1-202ENST00000358392 DNAJC9-AS1A6NH13 148 aa8.42□□□□□ -1.06
COL11A1-202ENST00000358392 C1orf195Q5TG92 126 aa8.42□□□□□ -1.06
COL11A1-202ENST00000358392 TMEM131Q92545 1883 aa8.42□□□□□ -1.06
COL11A1-202ENST00000358392 LINC00308Q8TCZ7 52 aa8.42□□□□□ -1.06
COL11A1-202ENST00000358392 NANOS2P60321 138 aaKnown RBP8.41□□□□□ -1.06
COL11A1-202ENST00000358392 C6orf99Q4VX62 202 aa8.41□□□□□ -1.06
COL11A1-202ENST00000358392 NEXN-AS1Q8NBZ9 246 aa8.41□□□□□ -1.06
COL11A1-202ENST00000358392 UBE2D4Q9Y2X8 147 aa8.41□□□□□ -1.06
COL11A1-202ENST00000358392 PCDH15Q96QU1 1955 aa8.41□□□□□ -1.06
COL11A1-202ENST00000358392 UBE2D1P51668 147 aa8.41□□□□□ -1.06
COL11A1-202ENST00000358392 PLA2G2CQ5R387 149 aa8.41□□□□□ -1.06
COL11A1-202ENST00000358392 DEFB131BA0A096LNP1 70 aa8.41□□□□□ -1.06
COL11A1-202ENST00000358392 RETNLBQ9BQ08 111 aa8.41□□□□□ -1.06
COL11A1-202ENST00000358392 CCDC140Q96MF4 163 aa8.4□□□□□ -1.06
COL11A1-202ENST00000358392 NDUFA7O95182 113 aa8.4□□□□□ -1.06
COL11A1-202ENST00000358392 KRTAP27-1Q3LI81 207 aa8.4□□□□□ -1.06
COL11A1-202ENST00000358392 LINC00482Q8N8I6 264 aa8.4□□□□□ -1.06
COL11A1-202ENST00000358392 IGLV4-3A0A075B6K6 122 aa8.4□□□□□ -1.06
COL11A1-202ENST00000358392 TRBV6-5A0A0K0K1A5 114 aa8.39□□□□□ -1.07
COL11A1-202ENST00000358392 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.39□□□□□ -1.07
COL11A1-202ENST00000358392 KIR2DL5BQ8NHK3 375 aa8.39□□□□□ -1.07
COL11A1-202ENST00000358392 ZNF22P17026 224 aaPredicted RBP8.39□□□□□ -1.07
COL11A1-202ENST00000358392 LINC00694P0DN24 101 aa8.39□□□□□ -1.07
COL11A1-202ENST00000358392 C2orf16Q68DN1 1984 aa8.38□□□□□ -1.07
COL11A1-202ENST00000358392 Q8N976 141 aa8.38□□□□□ -1.07
COL11A1-202ENST00000358392 UBE2D3P61077 147 aa8.38□□□□□ -1.07
COL11A1-202ENST00000358392 CELA1Q9UNI1 258 aa8.38□□□□□ -1.07
COL11A1-202ENST00000358392 A0A1B0GXF2 115 aa8.38□□□□□ -1.07
COL11A1-202ENST00000358392 Q8N9L7 120 aa8.38□□□□□ -1.07
COL11A1-202ENST00000358392 SOSTDC1Q6X4U4 206 aa8.38□□□□□ -1.07
COL11A1-202ENST00000358392 FAM19A3Q7Z5A8 133 aa8.38□□□□□ -1.07
COL11A1-202ENST00000358392 ATP5EP2Q5VTU8 51 aa8.37□□□□□ -1.07
COL11A1-202ENST00000358392 IGLV2-8P01709 118 aa8.37□□□□□ -1.07
COL11A1-202ENST00000358392 LY6LH3BQJ8 138 aa8.37□□□□□ -1.07
COL11A1-202ENST00000358392 SERP2Q8N6R1 65 aa8.36□□□□□ -1.07
COL11A1-202ENST00000358392 NOTCH4Q99466 2003 aa8.36□□□□□ -1.07
COL11A1-202ENST00000358392 A6NDX4 124 aa8.36□□□□□ -1.07
COL11A1-202ENST00000358392 CFAP126Q5VTH2 177 aa8.36□□□□□ -1.07
COL11A1-202ENST00000358392 X6R8D5 127 aa8.36□□□□□ -1.07
COL11A1-202ENST00000358392 NUP210Q8TEM1 1887 aaPredicted RBP8.36□□□□□ -1.07
COL11A1-202ENST00000358392 LOC100131303A0A0U1RQF7 123 aa8.35□□□□□ -1.07
COL11A1-202ENST00000358392 IGLV1-47P01700 117 aa8.35□□□□□ -1.07
COL11A1-202ENST00000358392 Q6Q795 121 aa8.35□□□□□ -1.07
COL11A1-202ENST00000358392 PRM2P04554 102 aa8.35□□□□□ -1.07
COL11A1-202ENST00000358392 Q6ZQY7 126 aa8.35□□□□□ -1.07
COL11A1-202ENST00000358392 PIP4P1Q86T03 277 aa8.35□□□□□ -1.07
COL11A1-202ENST00000358392 KIAA1549LQ6ZVL6 1849 aa8.35□□□□□ -1.07
COL11A1-202ENST00000358392 TRBV30A0A0K0K1B3 111 aa8.35□□□□□ -1.07
COL11A1-202ENST00000358392 SPRY4Q9C004 299 aa8.35□□□□□ -1.07
COL11A1-202ENST00000358392 TRBV6-8A0A0A6YYG3 113 aa8.35□□□□□ -1.07
COL11A1-202ENST00000358392 Q6ZVQ6 151 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms