RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 XGP55808 180 aa9.69□□□□□ -0.86
SMC4-202ENST00000357388 REG3AQ06141 175 aa9.69□□□□□ -0.86
SMC4-202ENST00000357388 IGKV1D-37A0A075B6S9 117 aa9.69□□□□□ -0.86
SMC4-202ENST00000357388 TRAV7A0A075B6U4 112 aa9.69□□□□□ -0.86
SMC4-202ENST00000357388 DNAJC9-AS1A6NH13 148 aa9.69□□□□□ -0.86
SMC4-202ENST00000357388 DEFB4AO15263 64 aa9.69□□□□□ -0.86
SMC4-202ENST00000357388 SHISA2Q6UWI4 295 aa9.69□□□□□ -0.86
SMC4-202ENST00000357388 NRGNQ92686 78 aa9.69□□□□□ -0.86
SMC4-202ENST00000357388 MAPKAPK5-AS1Q8N8E1 139 aa9.69□□□□□ -0.86
SMC4-202ENST00000357388 CDKN2A-AS1Q9UH64 79 aa9.69□□□□□ -0.86
SMC4-202ENST00000357388 MYLKQ15746 1914 aa9.69□□□□□ -0.86
SMC4-202ENST00000357388 MIFP14174 115 aa9.69□□□□□ -0.86
SMC4-202ENST00000357388 WFDC10BQ8IUB3 73 aa9.69□□□□□ -0.86
SMC4-202ENST00000357388 ANK1P16157 1881 aa9.69□□□□□ -0.86
SMC4-202ENST00000357388 LTBP1Q14766 1721 aa9.69□□□□□ -0.86
SMC4-202ENST00000357388 CEMP1Q6PRD7 247 aaPredicted RBP9.69□□□□□ -0.86
SMC4-202ENST00000357388 TNRC6BQ9UPQ9 1833 aaKnown RBP9.68□□□□□ -0.86
SMC4-202ENST00000357388 MUC7Q8TAX7 377 aa9.68□□□□□ -0.86
SMC4-202ENST00000357388 LINC00526Q96FQ7 95 aa9.68□□□□□ -0.86
SMC4-202ENST00000357388 A6NDX4 124 aa9.68□□□□□ -0.86
SMC4-202ENST00000357388 SIRPDQ9H106 197 aa9.68□□□□□ -0.86
SMC4-202ENST00000357388 DHRS4-AS1Q9P1J3 65 aa9.68□□□□□ -0.86
SMC4-202ENST00000357388 NACAE9PAV3 2078 aa9.68□□□□□ -0.86
SMC4-202ENST00000357388 TNFRSF13BO14836 293 aaPredicted RBP9.68□□□□□ -0.86
SMC4-202ENST00000357388 SLPIP03973 132 aa9.68□□□□□ -0.86
SMC4-202ENST00000357388 ZNF80P51504 273 aaPredicted RBP9.68□□□□□ -0.86
SMC4-202ENST00000357388 HIGD2AQ9BW72 106 aa9.68□□□□□ -0.86
SMC4-202ENST00000357388 ZSWIM8A7E2V4 1837 aa9.67□□□□□ -0.86
SMC4-202ENST00000357388 IGKV2-24A0A0C4DH68 120 aa9.67□□□□□ -0.86
SMC4-202ENST00000357388 CHCHD10Q8WYQ3 142 aaPredicted RBP9.67□□□□□ -0.86
SMC4-202ENST00000357388 C2orf91Q6ZV80 131 aa9.67□□□□□ -0.86
SMC4-202ENST00000357388 LINC00467Q9BRT7 94 aa9.67□□□□□ -0.86
SMC4-202ENST00000357388 TCF20Q9UGU0 1960 aaKnown RBP9.67□□□□□ -0.86
SMC4-202ENST00000357388 LINC00322Q6ZN03 302 aaPredicted RBP9.66□□□□□ -0.86
SMC4-202ENST00000357388 EML6Q6ZMW3 1958 aa9.66□□□□□ -0.86
SMC4-202ENST00000357388 HRCT1Q6UXD1 115 aa9.66□□□□□ -0.86
SMC4-202ENST00000357388 FAM19A1Q7Z5A9 133 aa9.66□□□□□ -0.86
SMC4-202ENST00000357388 TICRRQ7Z2Z1 1910 aa9.66□□□□□ -0.86
SMC4-202ENST00000357388 TRBV6-5A0A0K0K1A5 114 aa9.66□□□□□ -0.86
SMC4-202ENST00000357388 C7orf33Q8WU49 177 aa9.66□□□□□ -0.86
SMC4-202ENST00000357388 PMAIP1Q13794 54 aa9.66□□□□□ -0.86
SMC4-202ENST00000357388 MAP6D1Q9H9H5 199 aa9.66□□□□□ -0.86
SMC4-202ENST00000357388 KIAA1671Q9BY89 1806 aa9.65□□□□□ -0.86
SMC4-202ENST00000357388 SPRNQ5BIV9 151 aa9.65□□□□□ -0.86
SMC4-202ENST00000357388 TP53TG3Q9ULZ0 132 aa9.65□□□□□ -0.86
SMC4-202ENST00000357388 FAM208BQ5VWN6 2430 aa9.65□□□□□ -0.86
SMC4-202ENST00000357388 Q8N7P7 452 aa9.65□□□□□ -0.86
SMC4-202ENST00000357388 C6orf99Q4VX62 202 aa9.65□□□□□ -0.87
SMC4-202ENST00000357388 LINC00269Q8N2A0 174 aa9.64□□□□□ -0.87
SMC4-202ENST00000357388 FNDC1Q4ZHG4 1894 aaPredicted RBP9.63□□□□□ -0.87
SMC4-202ENST00000357388 DEFB131BA0A096LNP1 70 aa9.63□□□□□ -0.87
SMC4-202ENST00000357388 CRYGDP07320 174 aa9.63□□□□□ -0.87
SMC4-202ENST00000357388 PLA2G5P39877 138 aa9.63□□□□□ -0.87
SMC4-202ENST00000357388 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.63□□□□□ -0.87
SMC4-202ENST00000357388 GTF3C1Q12789 2109 aa9.63□□□□□ -0.87
SMC4-202ENST00000357388 LINC00574Q9H8X3 128 aa9.63□□□□□ -0.87
SMC4-202ENST00000357388 ZNF706Q9Y5V0 76 aaPredicted RBP9.63□□□□□ -0.87
SMC4-202ENST00000357388 A0A087WZ39 114 aa9.62□□□□□ -0.87
SMC4-202ENST00000357388 RNF185Q96GF1 192 aa9.62□□□□□ -0.87
SMC4-202ENST00000357388 CHD3Q12873 2000 aaKnown RBP9.62□□□□□ -0.87
SMC4-202ENST00000357388 E7EUB6 86 aa9.62□□□□□ -0.87
SMC4-202ENST00000357388 CLUHP3Q96NS8 147 aa9.62□□□□□ -0.87
SMC4-202ENST00000357388 TSC2P49815 1807 aa9.62□□□□□ -0.87
SMC4-202ENST00000357388 UBE2D2P62837 147 aa9.62□□□□□ -0.87
SMC4-202ENST00000357388 C1orf158Q8N1D5 194 aa9.62□□□□□ -0.87
SMC4-202ENST00000357388 M0QY20 66 aa9.62□□□□□ -0.87
SMC4-202ENST00000357388 M0R378 163 aa9.62□□□□□ -0.87
SMC4-202ENST00000357388 PLCE1Q9P212 2302 aa9.62□□□□□ -0.87
SMC4-202ENST00000357388 COL4A6Q14031 1691 aa9.61□□□□□ -0.87
SMC4-202ENST00000357388 HIVEP2P31629 2446 aa9.61□□□□□ -0.87
SMC4-202ENST00000357388 LRCOL1A6NCL2 159 aa9.61□□□□□ -0.87
SMC4-202ENST00000357388 C9orf85Q96MD7 179 aa9.61□□□□□ -0.87
SMC4-202ENST00000357388 WFDC10AQ9H1F0 79 aa9.61□□□□□ -0.87
SMC4-202ENST00000357388 COX17Q14061 63 aa9.61□□□□□ -0.87
SMC4-202ENST00000357388 UNQ9165/PRO28630Q6UXU0 137 aa9.61□□□□□ -0.87
SMC4-202ENST00000357388 TRBV6-4A0A1B0GX49 114 aa9.6□□□□□ -0.87
SMC4-202ENST00000357388 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
SMC4-202ENST00000357388 PTPRQQ9UMZ3 2332 aa9.6□□□□□ -0.87
SMC4-202ENST00000357388 PLXNA2O75051 1894 aa9.6□□□□□ -0.87
SMC4-202ENST00000357388 EIF4EBP1Q13541 118 aaPredicted RBP9.6□□□□□ -0.87
SMC4-202ENST00000357388 CCDC140Q96MF4 163 aa9.6□□□□□ -0.87
SMC4-202ENST00000357388 VWA8A3KMH1 1905 aa9.59□□□□□ -0.87
SMC4-202ENST00000357388 ZGRF1Q86YA3 2104 aa9.59□□□□□ -0.87
SMC4-202ENST00000357388 LINC01548A6NM66 108 aa9.59□□□□□ -0.87
SMC4-202ENST00000357388 C3orf84H3BNL1 204 aa9.59□□□□□ -0.87
SMC4-202ENST00000357388 EBI3Q14213 229 aa9.59□□□□□ -0.87
SMC4-202ENST00000357388 Q6YL49 198 aa9.59□□□□□ -0.87
SMC4-202ENST00000357388 Q6ZQY7 126 aa9.59□□□□□ -0.87
SMC4-202ENST00000357388 NLRC5Q86WI3 1866 aa9.59□□□□□ -0.87
SMC4-202ENST00000357388 DENND4AQ7Z401 1863 aa9.59□□□□□ -0.87
SMC4-202ENST00000357388 TRBV6-8A0A0A6YYG3 113 aa9.59□□□□□ -0.87
SMC4-202ENST00000357388 WFDC13Q8IUB5 93 aa9.59□□□□□ -0.87
SMC4-202ENST00000357388 PRORYQ9H606 182 aa9.59□□□□□ -0.87
SMC4-202ENST00000357388 Q6ZTI0 123 aa9.58□□□□□ -0.88
SMC4-202ENST00000357388 NRACQ8N912 160 aa9.58□□□□□ -0.88
SMC4-202ENST00000357388 K7EQG2 157 aa9.58□□□□□ -0.88
SMC4-202ENST00000357388 TRAV10A0A0B4J240 114 aa9.58□□□□□ -0.88
SMC4-202ENST00000357388 UBE2D1P51668 147 aa9.58□□□□□ -0.88
SMC4-202ENST00000357388 DEFB1P60022 68 aa9.57□□□□□ -0.88
SMC4-202ENST00000357388 IGHV4-31P0DP07 118 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms