RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 IGHV1OR15-1A0A075B7D0 117 aa8.86□□□□□ -0.99
SMARCAL1-201ENST00000357276 IGLV1-40P01703 118 aa8.85□□□□□ -0.99
SMARCAL1-201ENST00000357276 IGHV3-11P01762 117 aa8.85□□□□□ -0.99
SMARCAL1-201ENST00000357276 A0A1W2PPR1 153 aa8.85□□□□□ -0.99
SMARCAL1-201ENST00000357276 GNLYP22749 145 aa8.85□□□□□ -0.99
SMARCAL1-201ENST00000357276 SMCR5Q8TEV8 140 aa8.85□□□□□ -0.99
SMARCAL1-201ENST00000357276 VPREB3Q9UKI3 123 aa8.84□□□□□ -0.99
SMARCAL1-201ENST00000357276 IGLV5-45A0A087WSX0 123 aa8.84□□□□□ -0.99
SMARCAL1-201ENST00000357276 A8MZ25 164 aa8.84□□□□□ -0.99
SMARCAL1-201ENST00000357276 BEAN1Q3B7T3 259 aa8.84□□□□□ -0.99
SMARCAL1-201ENST00000357276 MED13LQ71F56 2210 aa8.83□□□□□ -1
SMARCAL1-201ENST00000357276 TRAV12-2A0A075B6T6 113 aa8.83□□□□□ -1
SMARCAL1-201ENST00000357276 CFHR3Q02985 330 aa8.83□□□□□ -1
SMARCAL1-201ENST00000357276 CEMP1Q6PRD7 247 aaPredicted RBP8.83□□□□□ -1
SMARCAL1-201ENST00000357276 CHCHD7Q9BUK0 85 aa8.83□□□□□ -1
SMARCAL1-201ENST00000357276 UBE2D4Q9Y2X8 147 aa8.83□□□□□ -1
SMARCAL1-201ENST00000357276 NDUFA1O15239 70 aa8.83□□□□□ -1
SMARCAL1-201ENST00000357276 NCOR2Q9Y618 2525 aa8.83□□□□□ -1
SMARCAL1-201ENST00000357276 FAM236AA0A1B0GUQ0 79 aa8.83□□□□□ -1
SMARCAL1-201ENST00000357276 FAM236BA0A1B0GV22 79 aa8.83□□□□□ -1
SMARCAL1-201ENST00000357276 C22orf24Q9Y442 160 aa8.82□□□□□ -1
SMARCAL1-201ENST00000357276 COX7A2LO14548 114 aa8.82□□□□□ -1
SMARCAL1-201ENST00000357276 NPC2P61916 151 aa8.82□□□□□ -1
SMARCAL1-201ENST00000357276 LINC00643Q86TS7 51 aa8.82□□□□□ -1
SMARCAL1-201ENST00000357276 NACAE9PAV3 2078 aa8.81□□□□□ -1
SMARCAL1-201ENST00000357276 ATP5G1P05496 136 aa8.81□□□□□ -1
SMARCAL1-201ENST00000357276 C5orf38Q86SI9 138 aa8.81□□□□□ -1
SMARCAL1-201ENST00000357276 C3orf22Q8N5N4 141 aa8.81□□□□□ -1
SMARCAL1-201ENST00000357276 K7EQG2 157 aa8.8□□□□□ -1
SMARCAL1-201ENST00000357276 TIRAPP58753 221 aa8.8□□□□□ -1
SMARCAL1-201ENST00000357276 RNASE13Q5GAN3 156 aaKnown RBP8.8□□□□□ -1
SMARCAL1-201ENST00000357276 BPESC1Q9GZL8 116 aa8.8□□□□□ -1
SMARCAL1-201ENST00000357276 A6NDX4 124 aa8.8□□□□□ -1
SMARCAL1-201ENST00000357276 PF4V1P10720 104 aa8.8□□□□□ -1
SMARCAL1-201ENST00000357276 ITPR1Q14643 2758 aa8.8□□□□□ -1
SMARCAL1-201ENST00000357276 CXCL5P42830 114 aa8.79□□□□□ -1
SMARCAL1-201ENST00000357276 LINC00308Q8TCZ7 52 aa8.79□□□□□ -1
SMARCAL1-201ENST00000357276 PPDPFQ9H3Y8 114 aa8.79□□□□□ -1
SMARCAL1-201ENST00000357276 IGLV5-39A0A0G2JS06 123 aa8.79□□□□□ -1
SMARCAL1-201ENST00000357276 SPINK13Q1W4C9 94 aa8.79□□□□□ -1
SMARCAL1-201ENST00000357276 LINC00526Q96FQ7 95 aa8.79□□□□□ -1
SMARCAL1-201ENST00000357276 UQCRQO14949 82 aa8.79□□□□□ -1
SMARCAL1-201ENST00000357276 NDUFA7O95182 113 aa8.79□□□□□ -1
SMARCAL1-201ENST00000357276 TRACP01848 142 aa8.79□□□□□ -1
SMARCAL1-201ENST00000357276 PROK1P58294 105 aa8.79□□□□□ -1
SMARCAL1-201ENST00000357276 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.79□□□□□ -1
SMARCAL1-201ENST00000357276 DAND5Q8N907 189 aa8.79□□□□□ -1
SMARCAL1-201ENST00000357276 DNAJC30Q96LL9 226 aa8.79□□□□□ -1
SMARCAL1-201ENST00000357276 PEMTQ9UBM1 199 aa8.79□□□□□ -1
SMARCAL1-201ENST00000357276 PKD1L2Q7Z442 2459 aa8.79□□□□□ -1
SMARCAL1-201ENST00000357276 ABCA2Q9BZC7 2435 aa8.79□□□□□ -1
SMARCAL1-201ENST00000357276 PIK3CD-AS1Q5SR53 167 aa8.78□□□□□ -1
SMARCAL1-201ENST00000357276 CDKN2A-AS1Q9UH64 79 aa8.78□□□□□ -1
SMARCAL1-201ENST00000357276 RBMY1A1P0DJD3 496 aaKnown RBP8.78□□□□□ -1
SMARCAL1-201ENST00000357276 RBMY1CP0DJD4 496 aa8.78□□□□□ -1
SMARCAL1-201ENST00000357276 HIST1H4AP62805 103 aaKnown RBP8.78□□□□□ -1
SMARCAL1-201ENST00000357276 RBMY1FQ15415 496 aaKnown RBP8.78□□□□□ -1
SMARCAL1-201ENST00000357276 C3orf56Q8N813 242 aa8.78□□□□□ -1
SMARCAL1-201ENST00000357276 NRGNQ92686 78 aa8.78□□□□□ -1
SMARCAL1-201ENST00000357276 DUX5Q96PT3 197 aa8.78□□□□□ -1
SMARCAL1-201ENST00000357276 Q9UF83 564 aa8.78□□□□□ -1
SMARCAL1-201ENST00000357276 FAM222AQ5U5X8 452 aa8.78□□□□□ -1
SMARCAL1-201ENST00000357276 CHD8Q9HCK8 2581 aa8.77□□□□□ -1.01
SMARCAL1-201ENST00000357276 IGHV3OR16-10A0A075B7F0 116 aa8.77□□□□□ -1.01
SMARCAL1-201ENST00000357276 SNRPD3P62318 126 aaKnown RBP8.77□□□□□ -1.01
SMARCAL1-201ENST00000357276 BLCAPP62952 87 aa8.77□□□□□ -1.01
SMARCAL1-201ENST00000357276 FAM19A3Q7Z5A8 133 aa8.77□□□□□ -1.01
SMARCAL1-201ENST00000357276 COL6A6A6NMZ7 2263 aa8.77□□□□□ -1.01
SMARCAL1-201ENST00000357276 IGKV3-20P01619 116 aa8.77□□□□□ -1.01
SMARCAL1-201ENST00000357276 BRD3OSQ6XYD6 125 aa8.77□□□□□ -1.01
SMARCAL1-201ENST00000357276 Q8N2B8 174 aa8.77□□□□□ -1.01
SMARCAL1-201ENST00000357276 DAZ2Q13117 558 aaKnown RBP8.76□□□□□ -1.01
SMARCAL1-201ENST00000357276 SOSTDC1Q6X4U4 206 aa8.76□□□□□ -1.01
SMARCAL1-201ENST00000357276 DAZ4Q86SG3 579 aaKnown RBP8.76□□□□□ -1.01
SMARCAL1-201ENST00000357276 LINC00467Q9BRT7 94 aa8.76□□□□□ -1.01
SMARCAL1-201ENST00000357276 DAZ3Q9NR90 486 aaKnown RBP8.76□□□□□ -1.01
SMARCAL1-201ENST00000357276 LINC00694P0DN24 101 aa8.76□□□□□ -1.01
SMARCAL1-201ENST00000357276 Q6ZSN1 163 aa8.76□□□□□ -1.01
SMARCAL1-201ENST00000357276 C2orf48Q96LS8 159 aa8.76□□□□□ -1.01
SMARCAL1-201ENST00000357276 HIVEP3Q5T1R4 2406 aa8.76□□□□□ -1.01
SMARCAL1-201ENST00000357276 DOPEY2Q9Y3R5 2298 aa8.75□□□□□ -1.01
SMARCAL1-201ENST00000357276 CIRBPQ14011 172 aaKnown RBP8.75□□□□□ -1.01
SMARCAL1-201ENST00000357276 C9orf153Q5TBE3 101 aa8.75□□□□□ -1.01
SMARCAL1-201ENST00000357276 CELSR1Q9NYQ6 3014 aa8.75□□□□□ -1.01
SMARCAL1-201ENST00000357276 ATRXP46100 2492 aa8.75□□□□□ -1.01
SMARCAL1-201ENST00000357276 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.75□□□□□ -1.01
SMARCAL1-201ENST00000357276 IGKV2-29A2NJV5 120 aaPredicted RBP8.75□□□□□ -1.01
SMARCAL1-201ENST00000357276 A8MTW9 85 aa8.75□□□□□ -1.01
SMARCAL1-201ENST00000357276 C19orf84I3L1E1 186 aa8.75□□□□□ -1.01
SMARCAL1-201ENST00000357276 UBTD1Q9HAC8 227 aa8.75□□□□□ -1.01
SMARCAL1-201ENST00000357276 SPTBN1Q01082 2364 aaKnown RBP8.75□□□□□ -1.01
SMARCAL1-201ENST00000357276 IGHV3-73A0A0B4J1V6 119 aa8.74□□□□□ -1.01
SMARCAL1-201ENST00000357276 PSMB8P28062 276 aa8.74□□□□□ -1.01
SMARCAL1-201ENST00000357276 LY6EQ16553 131 aa8.74□□□□□ -1.01
SMARCAL1-201ENST00000357276 SPTA1P02549 2419 aa8.74□□□□□ -1.01
SMARCAL1-201ENST00000357276 A0A1B0GX51 115 aa8.74□□□□□ -1.01
SMARCAL1-201ENST00000357276 COX6A2Q02221 97 aa8.74□□□□□ -1.01
SMARCAL1-201ENST00000357276 ZNF843Q8N446 348 aa8.74□□□□□ -1.01
SMARCAL1-201ENST00000357276 H3BUX3 64 aa8.74□□□□□ -1.01
SMARCAL1-201ENST00000357276 COX7CP15954 63 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms