RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 KLK9Q9UKQ9 250 aa6.15□□□□□ -1.43
CDC42SE1-201ENST00000357235 hADV29S1A0JD25 119 aa6.14□□□□□ -1.43
CDC42SE1-201ENST00000357235 FAM223BA6NKX1 122 aa6.14□□□□□ -1.43
CDC42SE1-201ENST00000357235 H3BUX3 64 aa6.14□□□□□ -1.43
CDC42SE1-201ENST00000357235 NPC2P61916 151 aa6.14□□□□□ -1.43
CDC42SE1-201ENST00000357235 FAM223AQ8IWN6 122 aa6.14□□□□□ -1.43
CDC42SE1-201ENST00000357235 DPH3Q96FX2 82 aa6.14□□□□□ -1.43
CDC42SE1-201ENST00000357235 NDUFA4O00483 81 aa6.14□□□□□ -1.43
CDC42SE1-201ENST00000357235 ACYP1P07311 99 aa6.14□□□□□ -1.43
CDC42SE1-201ENST00000357235 LMO4P61968 165 aa6.14□□□□□ -1.43
CDC42SE1-201ENST00000357235 ZFYVE26Q68DK2 2539 aa6.14□□□□□ -1.43
CDC42SE1-201ENST00000357235 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.13□□□□□ -1.43
CDC42SE1-201ENST00000357235 TRBV30A0A0K0K1B3 111 aa6.13□□□□□ -1.43
CDC42SE1-201ENST00000357235 IGIPA6NJ69 53 aa6.13□□□□□ -1.43
CDC42SE1-201ENST00000357235 F8WDY8 70 aa6.13□□□□□ -1.43
CDC42SE1-201ENST00000357235 RNASE13Q5GAN3 156 aaKnown RBP6.13□□□□□ -1.43
CDC42SE1-201ENST00000357235 PAPPA-AS1Q5QFB9 102 aa6.13□□□□□ -1.43
CDC42SE1-201ENST00000357235 LINC00643Q86TS7 51 aa6.13□□□□□ -1.43
CDC42SE1-201ENST00000357235 ZNF580Q9UK33 172 aa6.13□□□□□ -1.43
CDC42SE1-201ENST00000357235 CSMD2Q7Z408 3487 aa6.13□□□□□ -1.43
CDC42SE1-201ENST00000357235 USP24Q9UPU5 2620 aa6.13□□□□□ -1.43
CDC42SE1-201ENST00000357235 NACAE9PAV3 2078 aa6.13□□□□□ -1.43
CDC42SE1-201ENST00000357235 COX6CP09669 75 aa6.13□□□□□ -1.43
CDC42SE1-201ENST00000357235 DEFB121Q5J5C9 76 aa6.13□□□□□ -1.43
CDC42SE1-201ENST00000357235 C2CD3Q4AC94 2353 aa6.13□□□□□ -1.43
CDC42SE1-201ENST00000357235 TRIAP1O43715 76 aa6.12□□□□□ -1.43
CDC42SE1-201ENST00000357235 EIF4EBP3O60516 100 aaPredicted RBP6.12□□□□□ -1.43
CDC42SE1-201ENST00000357235 IGHV4-38-2P0DP08 117 aa6.12□□□□□ -1.43
CDC42SE1-201ENST00000357235 SPINK13Q1W4C9 94 aa6.12□□□□□ -1.43
CDC42SE1-201ENST00000357235 DAZ1Q9NQZ3 744 aaKnown RBP6.12□□□□□ -1.43
CDC42SE1-201ENST00000357235 SOCS3O14543 225 aa6.12□□□□□ -1.43
CDC42SE1-201ENST00000357235 TMEM258P61165 79 aa6.12□□□□□ -1.43
CDC42SE1-201ENST00000357235 A0A0J9YXV3 536 aa6.12□□□□□ -1.43
CDC42SE1-201ENST00000357235 POLR2KP53803 58 aaKnown RBP6.12□□□□□ -1.43
CDC42SE1-201ENST00000357235 LINC00315P59091 139 aa6.12□□□□□ -1.43
CDC42SE1-201ENST00000357235 MUSTN1Q8IVN3 82 aa6.12□□□□□ -1.43
CDC42SE1-201ENST00000357235 USP9YO00507 2555 aaPredicted RBP6.11□□□□□ -1.43
CDC42SE1-201ENST00000357235 KLRB1Q12918 225 aa6.11□□□□□ -1.43
CDC42SE1-201ENST00000357235 DSCR8Q96T75 97 aa6.11□□□□□ -1.43
CDC42SE1-201ENST00000357235 KIF25-AS1Q9Y6Z4 181 aa6.11□□□□□ -1.43
CDC42SE1-201ENST00000357235 IGHV1-69DA0A0B4J2H0 117 aa6.11□□□□□ -1.43
CDC42SE1-201ENST00000357235 ATOX1O00244 68 aa6.11□□□□□ -1.43
CDC42SE1-201ENST00000357235 IGHV1-69P01742 117 aa6.11□□□□□ -1.43
CDC42SE1-201ENST00000357235 ZNF876PQ49A33 203 aa6.11□□□□□ -1.43
CDC42SE1-201ENST00000357235 TMEM141Q96I45 108 aa6.11□□□□□ -1.43
CDC42SE1-201ENST00000357235 C2orf48Q96LS8 159 aa6.1□□□□□ -1.43
CDC42SE1-201ENST00000357235 C10orf99Q6UWK7 81 aa6.1□□□□□ -1.43
CDC42SE1-201ENST00000357235 TIMM17AQ99595 171 aa6.1□□□□□ -1.43
CDC42SE1-201ENST00000357235 KNCNA6PVL3 124 aa6.09□□□□□ -1.43
CDC42SE1-201ENST00000357235 J3QLI3 93 aa6.09□□□□□ -1.43
CDC42SE1-201ENST00000357235 PRM2P04554 102 aa6.09□□□□□ -1.43
CDC42SE1-201ENST00000357235 CXCL5P42830 114 aa6.09□□□□□ -1.43
CDC42SE1-201ENST00000357235 Q5XG85 94 aa6.09□□□□□ -1.43
CDC42SE1-201ENST00000357235 C1orf43Q9BWL3 253 aa6.09□□□□□ -1.43
CDC42SE1-201ENST00000357235 ICOSQ9Y6W8 199 aa6.09□□□□□ -1.43
CDC42SE1-201ENST00000357235 IGHV4OR15-8A0A075B7B6 117 aa6.09□□□□□ -1.43
CDC42SE1-201ENST00000357235 A0A087WW49 117 aa6.09□□□□□ -1.43
CDC42SE1-201ENST00000357235 TRAV8-3A0A0A6YYJ7 113 aa6.09□□□□□ -1.43
CDC42SE1-201ENST00000357235 IGHV4-61A0A0C4DH41 118 aa6.09□□□□□ -1.43
CDC42SE1-201ENST00000357235 SMCR5Q8TEV8 140 aa6.09□□□□□ -1.43
CDC42SE1-201ENST00000357235 USMG5Q96IX5 58 aa6.09□□□□□ -1.43
CDC42SE1-201ENST00000357235 PRORYQ9H606 182 aa6.09□□□□□ -1.43
CDC42SE1-201ENST00000357235 TMEM223A0PJW6 202 aa6.09□□□□□ -1.44
CDC42SE1-201ENST00000357235 A8MZ25 164 aa6.09□□□□□ -1.44
CDC42SE1-201ENST00000357235 KLLNB2CW77 178 aa6.09□□□□□ -1.44
CDC42SE1-201ENST00000357235 OXTP01178 125 aa6.09□□□□□ -1.44
CDC42SE1-201ENST00000357235 MED14OSP0DP75 135 aa6.09□□□□□ -1.44
CDC42SE1-201ENST00000357235 CD28P10747 220 aa6.09□□□□□ -1.44
CDC42SE1-201ENST00000357235 CLEC2BQ92478 149 aa6.09□□□□□ -1.44
CDC42SE1-201ENST00000357235 CELSR2Q9HCU4 2923 aa6.08□□□□□ -1.44
CDC42SE1-201ENST00000357235 ABCA2Q9BZC7 2435 aa6.08□□□□□ -1.44
CDC42SE1-201ENST00000357235 TRAV13-1A0A0B4J241 112 aa6.08□□□□□ -1.44
CDC42SE1-201ENST00000357235 TRBV27A0A0K0K1C4 114 aa6.08□□□□□ -1.44
CDC42SE1-201ENST00000357235 M0QY20 66 aa6.08□□□□□ -1.44
CDC42SE1-201ENST00000357235 FAM19A4Q96LR4 140 aa6.08□□□□□ -1.44
CDC42SE1-201ENST00000357235 AMELXQ99217 191 aa6.08□□□□□ -1.44
CDC42SE1-201ENST00000357235 CYSTM1Q9H1C7 97 aa6.08□□□□□ -1.44
CDC42SE1-201ENST00000357235 PRO0628Q9UI54 55 aa6.08□□□□□ -1.44
CDC42SE1-201ENST00000357235 MALP21145 153 aa6.08□□□□□ -1.44
CDC42SE1-201ENST00000357235 PROK1P58294 105 aa6.08□□□□□ -1.44
CDC42SE1-201ENST00000357235 SNRPD3P62318 126 aaKnown RBP6.08□□□□□ -1.44
CDC42SE1-201ENST00000357235 Q6ZSV7 163 aa6.08□□□□□ -1.44
CDC42SE1-201ENST00000357235 C5orf38Q86SI9 138 aa6.08□□□□□ -1.44
CDC42SE1-201ENST00000357235 RNF152Q8N8N0 203 aa6.08□□□□□ -1.44
CDC42SE1-201ENST00000357235 PYGO1Q9Y3Y4 419 aa6.08□□□□□ -1.44
CDC42SE1-201ENST00000357235 A0A0U1RRA0 63 aa6.07□□□□□ -1.44
CDC42SE1-201ENST00000357235 C19orf84I3L1E1 186 aa6.07□□□□□ -1.44
CDC42SE1-201ENST00000357235 LST1O00453 97 aa6.07□□□□□ -1.44
CDC42SE1-201ENST00000357235 POLQO75417 2590 aa6.07□□□□□ -1.44
CDC42SE1-201ENST00000357235 FAM208BQ5VWN6 2430 aa6.07□□□□□ -1.44
CDC42SE1-201ENST00000357235 IGHV3-16A0A0C4DH30 117 aa6.07□□□□□ -1.44
CDC42SE1-201ENST00000357235 IGHG2P01859 326 aa6.07□□□□□ -1.44
CDC42SE1-201ENST00000357235 SYNJ2BPP57105 145 aa6.07□□□□□ -1.44
CDC42SE1-201ENST00000357235 RHOHQ15669 191 aa6.07□□□□□ -1.44
CDC42SE1-201ENST00000357235 DAND5Q8N907 189 aa6.07□□□□□ -1.44
CDC42SE1-201ENST00000357235 DCANP1Q8TF63 244 aa6.07□□□□□ -1.44
CDC42SE1-201ENST00000357235 PRRC2AP48634 2157 aaKnown RBP6.07□□□□□ -1.44
CDC42SE1-201ENST00000357235 I3L3M4 83 aa6.07□□□□□ -1.44
CDC42SE1-201ENST00000357235 LEPROTO15243 131 aa6.07□□□□□ -1.44
CDC42SE1-201ENST00000357235 C19orf54Q5BKX5 351 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms