RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 TEX49A0A1B0GTD5 131 aa5.06□□□□□ -1.6
VPS13B-202ENST00000357162 IGLV2-8P01709 118 aa5.06□□□□□ -1.6
VPS13B-202ENST00000357162 NDPQ00604 133 aa5.06□□□□□ -1.6
VPS13B-202ENST00000357162 PATE2Q6UY27 113 aa5.06□□□□□ -1.6
VPS13B-202ENST00000357162 IGLV1-47P01700 117 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 SP5Q6BEB4 398 aaPredicted RBP5.05□□□□□ -1.6
VPS13B-202ENST00000357162 IGHV7-81A0A0B4J1V7 117 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 A0A0J9YY99 117 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 WT1P19544 449 aaPredicted RBP5.05□□□□□ -1.6
VPS13B-202ENST00000357162 NRACQ8N912 160 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 ZNRF2Q8NHG8 242 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 IGHV3-73A0A0B4J1V6 119 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 IGHV3-30P01768 117 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 IGHV3-30-5P0DP03 117 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 SPINK13Q1W4C9 94 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 RNF144BQ7Z419 303 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 ZNF581Q9P0T4 197 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 TRBV10-3A0A0K0K1G6 114 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 IGHV3-33P01772 117 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 FBXL19-AS1Q494R0 122 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 CGB3P0DN86 165 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 CGB7P0DN87 165 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 CHD9Q3L8U1 2897 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 F8WDY8 70 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 CHKB-CPT1BH3BT56 60 aa5.05□□□□□ -1.6
VPS13B-202ENST00000357162 IGLV2-14P01704 120 aa5.04□□□□□ -1.6
VPS13B-202ENST00000357162 NIPBLQ6KC79 2804 aaeCLIP5.04□□□□□ -1.62e-7■■■□□ 16.1
VPS13B-202ENST00000357162 IGLV2-23P01705 113 aa5.04□□□□□ -1.6
VPS13B-202ENST00000357162 BPESC1Q9GZL8 116 aa5.04□□□□□ -1.6
VPS13B-202ENST00000357162 C2orf91Q6ZV80 131 aa5.04□□□□□ -1.6
VPS13B-202ENST00000357162 TRAV26-2A0A0B4J265 109 aa5.04□□□□□ -1.6
VPS13B-202ENST00000357162 BPY2O14599 106 aa5.04□□□□□ -1.6
VPS13B-202ENST00000357162 TRAV12-2A0A075B6T6 113 aa5.04□□□□□ -1.6
VPS13B-202ENST00000357162 LECT2O14960 151 aa5.04□□□□□ -1.6
VPS13B-202ENST00000357162 PPDPFQ9H3Y8 114 aa5.04□□□□□ -1.6
VPS13B-202ENST00000357162 A0A0J9YXV3 536 aa5.03□□□□□ -1.6
VPS13B-202ENST00000357162 NXPH4O95158 308 aa5.03□□□□□ -1.6
VPS13B-202ENST00000357162 MLANAQ16655 118 aa5.03□□□□□ -1.6
VPS13B-202ENST00000357162 PRSS33Q8NF86 280 aa5.03□□□□□ -1.6
VPS13B-202ENST00000357162 DEFB130BP0DP73 79 aa5.03□□□□□ -1.6
VPS13B-202ENST00000357162 DEFB130AP0DP74 79 aa5.03□□□□□ -1.6
VPS13B-202ENST00000357162 UBE2D3P61077 147 aa5.03□□□□□ -1.6
VPS13B-202ENST00000357162 UBE2D2P62837 147 aa5.03□□□□□ -1.6
VPS13B-202ENST00000357162 CELSR2Q9HCU4 2923 aa5.03□□□□□ -1.6
VPS13B-202ENST00000357162 HOXB4P17483 251 aaPredicted RBP5.03□□□□□ -1.6
VPS13B-202ENST00000357162 BRK1Q8WUW1 75 aa5.03□□□□□ -1.6
VPS13B-202ENST00000357162 DHRS4-AS1Q9P1J3 65 aa5.03□□□□□ -1.6
VPS13B-202ENST00000357162 TRAV7A0A075B6U4 112 aa5.03□□□□□ -1.6
VPS13B-202ENST00000357162 F5H768 121 aa5.03□□□□□ -1.6
VPS13B-202ENST00000357162 ATP1A1-AS1Q5TC04 95 aa5.03□□□□□ -1.6
VPS13B-202ENST00000357162 COX7BP24311 80 aa5.03□□□□□ -1.6
VPS13B-202ENST00000357162 EBI3Q14213 229 aa5.03□□□□□ -1.6
VPS13B-202ENST00000357162 LOC107984640A0A0U1RRK4 108 aa5.02□□□□□ -1.61
VPS13B-202ENST00000357162 PSCAO43653 123 aa5.02□□□□□ -1.61
VPS13B-202ENST00000357162 HTN3P15516 51 aa5.02□□□□□ -1.61
VPS13B-202ENST00000357162 SEC61GP60059 68 aa5.02□□□□□ -1.61
VPS13B-202ENST00000357162 TRBV7-7A0A0K0K1E9 115 aa5.02□□□□□ -1.61
VPS13B-202ENST00000357162 ANGP03950 147 aaKnown RBP5.02□□□□□ -1.61
VPS13B-202ENST00000357162 UBE2D1P51668 147 aa5.02□□□□□ -1.61
VPS13B-202ENST00000357162 IGHV3-53P01767 116 aa5.02□□□□□ -1.61
VPS13B-202ENST00000357162 CSDC2Q9Y534 153 aaKnown RBP5.02□□□□□ -1.61
VPS13B-202ENST00000357162 USP17L23D6RBM5 183 aa5.02□□□□□ -1.61
VPS13B-202ENST00000357162 FAM215AQ9Y5M1 114 aa5.02□□□□□ -1.61
VPS13B-202ENST00000357162 WFDC9Q8NEX5 89 aa5.02□□□□□ -1.61
VPS13B-202ENST00000357162 TMEM223A0PJW6 202 aa5.02□□□□□ -1.61
VPS13B-202ENST00000357162 LYPD2Q6UXB3 125 aa5.02□□□□□ -1.61
VPS13B-202ENST00000357162 K7ENP7 123 aa5.01□□□□□ -1.61
VPS13B-202ENST00000357162 DSPP15924 2871 aaKnown RBP5.01□□□□□ -1.61
VPS13B-202ENST00000357162 LY6G6EA0A0G2JKS1 128 aa5.01□□□□□ -1.61
VPS13B-202ENST00000357162 LINC00308Q8TCZ7 52 aa5.01□□□□□ -1.61
VPS13B-202ENST00000357162 U3KQA8 63 aa5.01□□□□□ -1.61
VPS13B-202ENST00000357162 IGKV1D-37A0A075B6S9 117 aa5.01□□□□□ -1.61
VPS13B-202ENST00000357162 RSPO4Q2I0M5 234 aaPredicted RBP5.01□□□□□ -1.61
VPS13B-202ENST00000357162 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.01□□□□□ -1.61
VPS13B-202ENST00000357162 TRIAP1O43715 76 aa5.01□□□□□ -1.61
VPS13B-202ENST00000357162 ZNF580Q9UK33 172 aa5.01□□□□□ -1.61
VPS13B-202ENST00000357162 IGHV3OR16-10A0A075B7F0 116 aa5.01□□□□□ -1.61
VPS13B-202ENST00000357162 GNLYP22749 145 aa5.01□□□□□ -1.61
VPS13B-202ENST00000357162 ZNF80P51504 273 aaPredicted RBP5.01□□□□□ -1.61
VPS13B-202ENST00000357162 BRI3O95415 125 aa5.01□□□□□ -1.61
VPS13B-202ENST00000357162 ZNF22P17026 224 aaPredicted RBP5.01□□□□□ -1.61
VPS13B-202ENST00000357162 C4orf3Q8WVX3 66 aa5.01□□□□□ -1.61
VPS13B-202ENST00000357162 RNF185Q96GF1 192 aa5.01□□□□□ -1.61
VPS13B-202ENST00000357162 IGF1P05019 195 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 CD24P25063 80 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 UBE2DNLQ8IWF7 75 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 C5orf56Q8N8D9 126 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 M0QY20 66 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 LINC00173Q6ZV60 143 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 TENM3Q9P273 2699 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 CR1P17927 2039 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 SELENOKQ9Y6D0 94 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 CAMK2N2Q96S95 79 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 IGHV3-16A0A0C4DH30 117 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 PRO0628Q9UI54 55 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 IGLV2-11P01706 119 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 XCL1P47992 114 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 ZNF295-AS1Q8N0V1 137 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 TPSG1Q9NRR2 321 aa5□□□□□ -1.61
VPS13B-202ENST00000357162 C14orf132Q9NPU4 83 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms