RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 NUP35Q8NFH5 326 aa2.7□□□□□ -1.98
CNOT4-202ENST00000356162 CHCHD7Q9BUK0 85 aa2.7□□□□□ -1.98
CNOT4-202ENST00000356162 SEC11CQ9BY50 192 aa2.7□□□□□ -1.98
CNOT4-202ENST00000356162 TMEM191AQ9H0A3 160 aa2.7□□□□□ -1.98
CNOT4-202ENST00000356162 DAZ3Q9NR90 486 aaKnown RBP2.7□□□□□ -1.98
CNOT4-202ENST00000356162 TRAV9-2A0A087WT02 112 aa2.7□□□□□ -1.98
CNOT4-202ENST00000356162 KRTAP23-1A1A580 65 aa2.7□□□□□ -1.98
CNOT4-202ENST00000356162 F8W036 122 aa2.7□□□□□ -1.98
CNOT4-202ENST00000356162 ATP5L2Q7Z4Y8 100 aa2.7□□□□□ -1.98
CNOT4-202ENST00000356162 MRAP2Q96G30 205 aa2.7□□□□□ -1.98
CNOT4-202ENST00000356162 KRTAP1-5Q9BYS1 174 aa2.7□□□□□ -1.98
CNOT4-202ENST00000356162 TNFRSF18Q9Y5U5 241 aa2.7□□□□□ -1.98
CNOT4-202ENST00000356162 IGHV3-38A0A0C4DH36 116 aa2.69□□□□□ -1.98
CNOT4-202ENST00000356162 A0A1B0GXF2 115 aa2.69□□□□□ -1.98
CNOT4-202ENST00000356162 RTL8CO15255 209 aa2.69□□□□□ -1.98
CNOT4-202ENST00000356162 MALP21145 153 aa2.69□□□□□ -1.98
CNOT4-202ENST00000356162 HBBP68871 147 aa2.69□□□□□ -1.98
CNOT4-202ENST00000356162 NFE4Q86UQ8 179 aa2.69□□□□□ -1.98
CNOT4-202ENST00000356162 NIT2Q9NQR4 276 aa2.69□□□□□ -1.98
CNOT4-202ENST00000356162 Q9UF83 564 aa2.69□□□□□ -1.98
CNOT4-202ENST00000356162 CARHSP1Q9Y2V2 147 aaKnown RBP2.69□□□□□ -1.98
CNOT4-202ENST00000356162 TRAV9-1A0A075B6T8 112 aa2.69□□□□□ -1.98
CNOT4-202ENST00000356162 TRBV6-5A0A0K0K1A5 114 aa2.69□□□□□ -1.98
CNOT4-202ENST00000356162 LAGE3Q14657 143 aa2.69□□□□□ -1.98
CNOT4-202ENST00000356162 C10orf91Q5T1B1 145 aa2.69□□□□□ -1.98
CNOT4-202ENST00000356162 KCNIP4Q6PIL6 250 aa2.69□□□□□ -1.98
CNOT4-202ENST00000356162 RNF185Q96GF1 192 aa2.69□□□□□ -1.98
CNOT4-202ENST00000356162 IMMP2LQ96T52 175 aa2.69□□□□□ -1.98
CNOT4-202ENST00000356162 CTDSP1Q9GZU7 261 aa2.69□□□□□ -1.98
CNOT4-202ENST00000356162 TRBV25-1A0A075B6N4 114 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 TRBV6-8A0A0A6YYG3 113 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 IGHV1-24A0A0C4DH33 117 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 NCR2O95944 276 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 PPP1R17O96001 155 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 RAB4AP20338 218 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 ELOBQ15370 118 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 RHEBQ15382 184 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 IQCJQ1A5X6 159 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 FAM104BQ5XKR9 115 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 MRPL54Q6P161 138 aaKnown RBP2.68□□□□□ -1.98
CNOT4-202ENST00000356162 NIT1Q86X76 327 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 AMN1Q8IY45 258 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 DYNC1H1Q14204 4646 aaKnown RBP2.68□□□□□ -1.98
CNOT4-202ENST00000356162 BIRC6Q9NR09 4857 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 TRAV26-2A0A0B4J265 109 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 IBA57-AS1B1ANH7 110 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 IGHV3-30P01768 117 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 IGHV3-33P01772 117 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 IGHV3-30-3P0DP02 117 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 IGHV3-30-5P0DP03 117 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 COTL1Q14019 142 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 NDUFA5Q16718 116 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 Q6ZRN7 208 aaPredicted RBP2.68□□□□□ -1.98
CNOT4-202ENST00000356162 RPL39LQ96EH5 51 aaKnown RBP2.68□□□□□ -1.98
CNOT4-202ENST00000356162 BTF3L4Q96K17 158 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 TMEM243Q9BU79 118 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 ST20Q9HBF5 79 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 URGCP-MRPS24S4R325 110 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 FAT2Q9NYQ8 4349 aa2.68□□□□□ -1.98
CNOT4-202ENST00000356162 A0A1B0GVY2 172 aa2.67□□□□□ -1.98
CNOT4-202ENST00000356162 APCSP02743 223 aa2.67□□□□□ -1.98
CNOT4-202ENST00000356162 RPL32P62910 135 aaKnown RBP2.67□□□□□ -1.98
CNOT4-202ENST00000356162 MRPL51Q4U2R6 128 aaKnown RBP2.67□□□□□ -1.98
CNOT4-202ENST00000356162 NTM-AS1Q6ZSK4 140 aa2.67□□□□□ -1.98
CNOT4-202ENST00000356162 RMI2Q96E14 147 aa2.67□□□□□ -1.98
CNOT4-202ENST00000356162 CHCHD5Q9BSY4 110 aa2.67□□□□□ -1.98
CNOT4-202ENST00000356162 A0A087WX48 190 aa2.67□□□□□ -1.98
CNOT4-202ENST00000356162 TRAV8-3A0A0A6YYJ7 113 aa2.67□□□□□ -1.98
CNOT4-202ENST00000356162 SDHAF1A6NFY7 115 aa2.67□□□□□ -1.98
CNOT4-202ENST00000356162 PHOX2AO14813 284 aa2.67□□□□□ -1.98
CNOT4-202ENST00000356162 PPBPP02775 128 aa2.67□□□□□ -1.98
CNOT4-202ENST00000356162 S100PP25815 95 aa2.67□□□□□ -1.98
CNOT4-202ENST00000356162 AMTP48728 403 aa2.67□□□□□ -1.98
CNOT4-202ENST00000356162 CAMPP49913 170 aa2.67□□□□□ -1.98
CNOT4-202ENST00000356162 NRACQ8N912 160 aa2.67□□□□□ -1.98
CNOT4-202ENST00000356162 TMEM242Q9NWH2 141 aa2.67□□□□□ -1.98
CNOT4-202ENST00000356162 DNAH11Q96DT5 4516 aa2.67□□□□□ -1.98
CNOT4-202ENST00000356162 SMKR1H3BMG3 65 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 H7C423 109 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 I3L3M4 83 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 UBE2L6O14933 153 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 TCAPO15273 167 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 SNAPINO95295 136 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 RPS10P46783 165 aaKnown RBP2.66□□□□□ -1.98
CNOT4-202ENST00000356162 GAGE6Q13070 117 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 COX19Q49B96 90 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 SVBPQ8N300 66 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 C20orf78Q9BR46 151 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 TMEM70Q9BUB7 260 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 TM2D2Q9BX73 214 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 LAMTOR2Q9Y2Q5 125 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 HECTD4Q9Y4D8 3996 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 TRBV27A0A0K0K1C4 114 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 C7orf77A4D0Y5 90 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 D6R8Y8 96 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 GAS8-AS1O95177 125 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 TSHBP01222 138 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 CRPP02741 224 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 PMCHP20382 165 aa2.66□□□□□ -1.98
CNOT4-202ENST00000356162 CKS2P33552 79 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms