RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 NDUFA1O15239 70 aa8.34□□□□□ -1.08
CAPN9-202ENST00000354537 COPS9Q8WXC6 57 aa8.34□□□□□ -1.08
CAPN9-202ENST00000354537 ACYP1P07311 99 aa8.33□□□□□ -1.08
CAPN9-202ENST00000354537 PPDPFQ9H3Y8 114 aa8.33□□□□□ -1.08
CAPN9-202ENST00000354537 ADARB2-AS1A8MUL3 147 aa8.32□□□□□ -1.08
CAPN9-202ENST00000354537 C19orf84I3L1E1 186 aa8.32□□□□□ -1.08
CAPN9-202ENST00000354537 CIRBPQ14011 172 aaKnown RBP8.32□□□□□ -1.08
CAPN9-202ENST00000354537 ZNF415Q09FC8 603 aa8.32□□□□□ -1.08
CAPN9-202ENST00000354537 B4DSR2 109 aa8.31□□□□□ -1.08
CAPN9-202ENST00000354537 FAM19A3Q7Z5A8 133 aa8.31□□□□□ -1.08
CAPN9-202ENST00000354537 CCL19Q99731 98 aa8.31□□□□□ -1.08
CAPN9-202ENST00000354537 IGHV3-53P01767 116 aa8.31□□□□□ -1.08
CAPN9-202ENST00000354537 RBMY1A1P0DJD3 496 aaKnown RBP8.31□□□□□ -1.08
CAPN9-202ENST00000354537 RBMY1CP0DJD4 496 aa8.31□□□□□ -1.08
CAPN9-202ENST00000354537 RBMY1FQ15415 496 aaKnown RBP8.31□□□□□ -1.08
CAPN9-202ENST00000354537 CACNA1BQ00975 2339 aa8.31□□□□□ -1.08
CAPN9-202ENST00000354537 CEP295Q9C0D2 2601 aa8.3□□□□□ -1.08
CAPN9-202ENST00000354537 TRBV7-7A0A0K0K1E9 115 aa8.3□□□□□ -1.08
CAPN9-202ENST00000354537 BEAN1Q3B7T3 259 aa8.3□□□□□ -1.08
CAPN9-202ENST00000354537 UBE2E2Q96LR5 201 aa8.3□□□□□ -1.08
CAPN9-202ENST00000354537 NCOR2Q9Y618 2525 aa8.3□□□□□ -1.08
CAPN9-202ENST00000354537 B5MCH6 92 aa8.3□□□□□ -1.08
CAPN9-202ENST00000354537 SYNJ2BPP57105 145 aa8.3□□□□□ -1.08
CAPN9-202ENST00000354537 CEMP1Q6PRD7 247 aaPredicted RBP8.3□□□□□ -1.08
CAPN9-202ENST00000354537 IMUPQ9GZP8 106 aa8.3□□□□□ -1.08
CAPN9-202ENST00000354537 IGLV5-39A0A0G2JS06 123 aa8.29□□□□□ -1.08
CAPN9-202ENST00000354537 TMEM95Q3KNT9 176 aa8.29□□□□□ -1.08
CAPN9-202ENST00000354537 IGHV4-30-2A0A087WSY4 118 aa8.29□□□□□ -1.08
CAPN9-202ENST00000354537 PROK1P58294 105 aa8.29□□□□□ -1.08
CAPN9-202ENST00000354537 DSCR9P59020 149 aa8.29□□□□□ -1.08
CAPN9-202ENST00000354537 SS18L2Q9UHA2 77 aa8.29□□□□□ -1.08
CAPN9-202ENST00000354537 RS1O15537 224 aa8.28□□□□□ -1.08
CAPN9-202ENST00000354537 HERVK_113P63121 156 aa8.28□□□□□ -1.08
CAPN9-202ENST00000354537 CLEC2BQ92478 149 aa8.28□□□□□ -1.08
CAPN9-202ENST00000354537 TMEM101Q96IK0 257 aa8.28□□□□□ -1.08
CAPN9-202ENST00000354537 DUX3Q96PT4 197 aa8.28□□□□□ -1.08
CAPN9-202ENST00000354537 MED13LQ71F56 2210 aa8.28□□□□□ -1.08
CAPN9-202ENST00000354537 ABCA2Q9BZC7 2435 aa8.28□□□□□ -1.08
CAPN9-202ENST00000354537 IGHV3-73A0A0B4J1V6 119 aa8.28□□□□□ -1.08
CAPN9-202ENST00000354537 COX7A2LO14548 114 aa8.28□□□□□ -1.08
CAPN9-202ENST00000354537 HOXD3P31249 432 aaPredicted RBP8.28□□□□□ -1.08
CAPN9-202ENST00000354537 AVPP01185 164 aa8.27□□□□□ -1.09
CAPN9-202ENST00000354537 IGHV4-59P01825 116 aa8.27□□□□□ -1.09
CAPN9-202ENST00000354537 ATP5J2P56134 94 aa8.27□□□□□ -1.09
CAPN9-202ENST00000354537 LINC00308Q8TCZ7 52 aa8.27□□□□□ -1.09
CAPN9-202ENST00000354537 CITED2Q99967 270 aaPredicted RBP8.27□□□□□ -1.09
CAPN9-202ENST00000354537 CDKN2A-AS1Q9UH64 79 aa8.27□□□□□ -1.09
CAPN9-202ENST00000354537 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.27□□□□□ -1.09
CAPN9-202ENST00000354537 IGKV2-29A2NJV5 120 aaPredicted RBP8.27□□□□□ -1.09
CAPN9-202ENST00000354537 J3QLI3 93 aa8.27□□□□□ -1.09
CAPN9-202ENST00000354537 DEFB112Q30KQ8 113 aa8.27□□□□□ -1.09
CAPN9-202ENST00000354537 SHISA2Q6UWI4 295 aa8.27□□□□□ -1.09
CAPN9-202ENST00000354537 Q6ZSN1 163 aa8.27□□□□□ -1.09
CAPN9-202ENST00000354537 CSDC2Q9Y534 153 aaKnown RBP8.27□□□□□ -1.09
CAPN9-202ENST00000354537 CSMD1Q96PZ7 3565 aa8.26□□□□□ -1.09
CAPN9-202ENST00000354537 KNCNA6PVL3 124 aa8.26□□□□□ -1.09
CAPN9-202ENST00000354537 CCDC179H3BU77 68 aa8.26□□□□□ -1.09
CAPN9-202ENST00000354537 RNASE13Q5GAN3 156 aaKnown RBP8.26□□□□□ -1.09
CAPN9-202ENST00000354537 C11orf72Q8NBR9 251 aa8.26□□□□□ -1.09
CAPN9-202ENST00000354537 DUX5Q96PT3 197 aa8.26□□□□□ -1.09
CAPN9-202ENST00000354537 A8MZ25 164 aa8.26□□□□□ -1.09
CAPN9-202ENST00000354537 TRACP01848 142 aa8.26□□□□□ -1.09
CAPN9-202ENST00000354537 DEFB131AP59861 70 aa8.26□□□□□ -1.09
CAPN9-202ENST00000354537 C10orf99Q6UWK7 81 aa8.26□□□□□ -1.09
CAPN9-202ENST00000354537 DGAT2L7PQ6IED9 249 aa8.25□□□□□ -1.09
CAPN9-202ENST00000354537 RBMY1BA6NDE4 496 aaKnown RBP8.25□□□□□ -1.09
CAPN9-202ENST00000354537 RBMY1EA6NEQ0 496 aaKnown RBP8.25□□□□□ -1.09
CAPN9-202ENST00000354537 RBMY1DP0C7P1 496 aaKnown RBP8.25□□□□□ -1.09
CAPN9-202ENST00000354537 Q6ZSV7 163 aa8.25□□□□□ -1.09
CAPN9-202ENST00000354537 PRRC2AP48634 2157 aaKnown RBP8.25□□□□□ -1.09
CAPN9-202ENST00000354537 CHD8Q9HCK8 2581 aa8.25□□□□□ -1.09
CAPN9-202ENST00000354537 HERV-K104P63124 156 aa8.24□□□□□ -1.09
CAPN9-202ENST00000354537 NPC2P61916 151 aa8.24□□□□□ -1.09
CAPN9-202ENST00000354537 LINC00242Q5T6M2 205 aa8.24□□□□□ -1.09
CAPN9-202ENST00000354537 LINC01356Q8N9X3 169 aa8.24□□□□□ -1.09
CAPN9-202ENST00000354537 SPTA1P02549 2419 aa8.23□□□□□ -1.09
CAPN9-202ENST00000354537 IGHV3OR16-12A0A075B7B8 117 aa8.23□□□□□ -1.09
CAPN9-202ENST00000354537 HTN1P15515 57 aa8.23□□□□□ -1.09
CAPN9-202ENST00000354537 GNLYP22749 145 aa8.23□□□□□ -1.09
CAPN9-202ENST00000354537 FAM222AQ5U5X8 452 aa8.23□□□□□ -1.09
CAPN9-202ENST00000354537 Q9H8V8 135 aa8.23□□□□□ -1.09
CAPN9-202ENST00000354537 PEMTQ9UBM1 199 aa8.23□□□□□ -1.09
CAPN9-202ENST00000354537 VPREB3Q9UKI3 123 aa8.23□□□□□ -1.09
CAPN9-202ENST00000354537 INSP01308 110 aa8.23□□□□□ -1.09
CAPN9-202ENST00000354537 PF4P02776 101 aa8.23□□□□□ -1.09
CAPN9-202ENST00000354537 SDIM1Q6ZPB5 146 aa8.23□□□□□ -1.09
CAPN9-202ENST00000354537 LINC01587Q99440 93 aa8.23□□□□□ -1.09
CAPN9-202ENST00000354537 Q9UF83 564 aa8.23□□□□□ -1.09
CAPN9-202ENST00000354537 TRBV10-1A0A0K0K1A3 114 aa8.22□□□□□ -1.09
CAPN9-202ENST00000354537 LY6DQ14210 128 aa8.22□□□□□ -1.09
CAPN9-202ENST00000354537 LINC00643Q86TS7 51 aa8.22□□□□□ -1.09
CAPN9-202ENST00000354537 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.22□□□□□ -1.09
CAPN9-202ENST00000354537 ZNF702PQ9H963 129 aa8.22□□□□□ -1.09
CAPN9-202ENST00000354537 COX6A2Q02221 97 aa8.22□□□□□ -1.09
CAPN9-202ENST00000354537 ZNF625Q96I27 306 aaPredicted RBP8.22□□□□□ -1.09
CAPN9-202ENST00000354537 TMEM126AQ9H061 195 aa8.22□□□□□ -1.09
CAPN9-202ENST00000354537 SPTBN1Q01082 2364 aaKnown RBP8.22□□□□□ -1.09
CAPN9-202ENST00000354537 SMIM1B2RUZ4 78 aa8.21□□□□□ -1.09
CAPN9-202ENST00000354537 ATP5G1P05496 136 aa8.21□□□□□ -1.09
CAPN9-202ENST00000354537 DAND5Q8N907 189 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms