RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 TRBV20-1A0A075B6N2 111 aa7.91□□□□□ -1.14
RTN3-204ENST00000354497 A0A0G2JRQ6 117 aa7.91□□□□□ -1.14
RTN3-204ENST00000354497 SNCGO76070 127 aa7.91□□□□□ -1.14
RTN3-204ENST00000354497 IGKV3-20P01619 116 aa7.91□□□□□ -1.14
RTN3-204ENST00000354497 IGLV2-8P01709 118 aa7.91□□□□□ -1.14
RTN3-204ENST00000354497 CRYGDP07320 174 aa7.91□□□□□ -1.14
RTN3-204ENST00000354497 CENPWQ5EE01 88 aa7.91□□□□□ -1.14
RTN3-204ENST00000354497 IGF2BP2-AS1Q96M15 143 aa7.91□□□□□ -1.14
RTN3-204ENST00000354497 DKK2Q9UBU2 259 aa7.91□□□□□ -1.14
RTN3-204ENST00000354497 CACNG5Q9UF02 275 aa7.91□□□□□ -1.14
RTN3-204ENST00000354497 TRAV5A0A0B4J249 113 aa7.9□□□□□ -1.14
RTN3-204ENST00000354497 F5H768 121 aa7.9□□□□□ -1.14
RTN3-204ENST00000354497 H3BP45 60 aa7.9□□□□□ -1.14
RTN3-204ENST00000354497 P0C879 139 aa7.9□□□□□ -1.14
RTN3-204ENST00000354497 HBBP68871 147 aa7.9□□□□□ -1.14
RTN3-204ENST00000354497 PMVKQ15126 192 aa7.9□□□□□ -1.14
RTN3-204ENST00000354497 SPANXN5Q5MJ07 72 aa7.9□□□□□ -1.14
RTN3-204ENST00000354497 DCANP1Q8TF63 244 aa7.9□□□□□ -1.14
RTN3-204ENST00000354497 TP73-AS1Q9UF72 201 aa7.9□□□□□ -1.14
RTN3-204ENST00000354497 DMBT1Q9UGM3 2413 aaPredicted RBP7.9□□□□□ -1.15
RTN3-204ENST00000354497 AGRNO00468 2067 aa7.89□□□□□ -1.15
RTN3-204ENST00000354497 ARL14EPLP0DKL9 152 aa7.89□□□□□ -1.15
RTN3-204ENST00000354497 FXYD2P54710 66 aa7.89□□□□□ -1.15
RTN3-204ENST00000354497 DAD1P61803 113 aa7.89□□□□□ -1.15
RTN3-204ENST00000354497 SPINK9Q5DT21 86 aa7.89□□□□□ -1.15
RTN3-204ENST00000354497 GDF5OSQ5U4N7 250 aa7.89□□□□□ -1.15
RTN3-204ENST00000354497 C15orf53Q8NAA6 179 aa7.89□□□□□ -1.15
RTN3-204ENST00000354497 SGK494Q96LW2 274 aa7.89□□□□□ -1.15
RTN3-204ENST00000354497 C18orf15Q96N68 181 aa7.89□□□□□ -1.15
RTN3-204ENST00000354497 KLF12Q9Y4X4 402 aa7.89□□□□□ -1.15
RTN3-204ENST00000354497 NACAE9PAV3 2078 aa7.89□□□□□ -1.15
RTN3-204ENST00000354497 A8MWL6 223 aa7.88□□□□□ -1.15
RTN3-204ENST00000354497 C9JAW5 83 aa7.88□□□□□ -1.15
RTN3-204ENST00000354497 M0R2P5 195 aa7.88□□□□□ -1.15
RTN3-204ENST00000354497 KRTAP10-2P60368 255 aa7.88□□□□□ -1.15
RTN3-204ENST00000354497 SNRPD3P62318 126 aaKnown RBP7.88□□□□□ -1.15
RTN3-204ENST00000354497 ERHP84090 104 aaKnown RBP7.88□□□□□ -1.15
RTN3-204ENST00000354497 FAM159AQ6UWV7 190 aa7.88□□□□□ -1.15
RTN3-204ENST00000354497 NFE4Q86UQ8 179 aa7.88□□□□□ -1.15
RTN3-204ENST00000354497 TMEM101Q96IK0 257 aa7.88□□□□□ -1.15
RTN3-204ENST00000354497 CARD19Q96LW7 228 aa7.88□□□□□ -1.15
RTN3-204ENST00000354497 AP5S1Q9NUS5 200 aa7.88□□□□□ -1.15
RTN3-204ENST00000354497 HIGD1AQ9Y241 93 aa7.88□□□□□ -1.15
RTN3-204ENST00000354497 H3BMM0 161 aa7.87□□□□□ -1.15
RTN3-204ENST00000354497 DUSP14O95147 198 aaKnown RBP7.87□□□□□ -1.15
RTN3-204ENST00000354497 IGKV1-5P01602 117 aa7.87□□□□□ -1.15
RTN3-204ENST00000354497 IAPPP10997 89 aa7.87□□□□□ -1.15
RTN3-204ENST00000354497 LINC00173Q6ZV60 143 aa7.87□□□□□ -1.15
RTN3-204ENST00000354497 FAM19A5Q7Z5A7 132 aaPredicted RBP7.87□□□□□ -1.15
RTN3-204ENST00000354497 NAA38Q9BRA0 125 aaKnown RBP7.87□□□□□ -1.15
RTN3-204ENST00000354497 PRADC1Q9BSG0 188 aa7.87□□□□□ -1.15
RTN3-204ENST00000354497 CHAC1Q9BUX1 264 aa7.87□□□□□ -1.15
RTN3-204ENST00000354497 UBR4Q5T4S7 5183 aa7.87□□□□□ -1.15
RTN3-204ENST00000354497 MYCBP2O75592 4640 aa7.87□□□□□ -1.15
RTN3-204ENST00000354497 TRBV7-7A0A0K0K1E9 115 aa7.86□□□□□ -1.15
RTN3-204ENST00000354497 NPIPB6E9PJ23 425 aa7.86□□□□□ -1.15
RTN3-204ENST00000354497 IGKV1-39P01597 117 aa7.86□□□□□ -1.15
RTN3-204ENST00000354497 IGKV1D-39P04432 117 aa7.86□□□□□ -1.15
RTN3-204ENST00000354497 MGST1P10620 155 aaKnown RBP7.86□□□□□ -1.15
RTN3-204ENST00000354497 PRCDQ00LT1 54 aa7.86□□□□□ -1.15
RTN3-204ENST00000354497 XP32Q5T750 250 aa7.86□□□□□ -1.15
RTN3-204ENST00000354497 ZNF492Q9P255 531 aa7.86□□□□□ -1.15
RTN3-204ENST00000354497 FAM240AA0A1B0GVK7 77 aa7.86□□□□□ -1.15
RTN3-204ENST00000354497 CCL18P55774 89 aa7.86□□□□□ -1.15
RTN3-204ENST00000354497 DEFB1P60022 68 aa7.86□□□□□ -1.15
RTN3-204ENST00000354497 Q5VSD8 79 aa7.86□□□□□ -1.15
RTN3-204ENST00000354497 BAALCQ8WXS3 180 aa7.86□□□□□ -1.15
RTN3-204ENST00000354497 A8MWV9 139 aa7.85□□□□□ -1.15
RTN3-204ENST00000354497 UQCRQO14949 82 aa7.85□□□□□ -1.15
RTN3-204ENST00000354497 FOXA3P55318 350 aaPredicted RBP7.85□□□□□ -1.15
RTN3-204ENST00000354497 UBE2D3P61077 147 aa7.85□□□□□ -1.15
RTN3-204ENST00000354497 UBE2D2P62837 147 aa7.85□□□□□ -1.15
RTN3-204ENST00000354497 OR1L4Q8NGR5 311 aa7.85□□□□□ -1.15
RTN3-204ENST00000354497 LINC00526Q96FQ7 95 aa7.85□□□□□ -1.15
RTN3-204ENST00000354497 RNASE7Q9H1E1 156 aaKnown RBP7.85□□□□□ -1.15
RTN3-204ENST00000354497 FAT1Q14517 4588 aa7.84□□□□□ -1.15
RTN3-204ENST00000354497 HSPE1P61604 102 aaKnown RBP7.84□□□□□ -1.15
RTN3-204ENST00000354497 ENY2Q9NPA8 101 aa7.84□□□□□ -1.15
RTN3-204ENST00000354497 NHP2Q9NX24 153 aaKnown RBP7.84□□□□□ -1.15
RTN3-204ENST00000354497 MRPL36Q9P0J6 103 aaKnown RBP7.84□□□□□ -1.15
RTN3-204ENST00000354497 LINC00588Q9Y4M8 146 aa7.84□□□□□ -1.15
RTN3-204ENST00000354497 DEFB130BP0DP73 79 aa7.83□□□□□ -1.16
RTN3-204ENST00000354497 DEFB130AP0DP74 79 aa7.83□□□□□ -1.16
RTN3-204ENST00000354497 FUSP35637 526 aaKnown RBP eCLIP7.83□□□□□ -1.16
RTN3-204ENST00000354497 RPL13AP40429 203 aaKnown RBP7.83□□□□□ -1.16
RTN3-204ENST00000354497 NMUP48645 174 aa7.83□□□□□ -1.16
RTN3-204ENST00000354497 SUB1P53999 127 aaKnown RBP eCLIP7.83□□□□□ -1.168e-14■■□□□ 13.4
RTN3-204ENST00000354497 MLANAQ16655 118 aa7.83□□□□□ -1.16
RTN3-204ENST00000354497 SIGLEC15Q6ZMC9 328 aa7.83□□□□□ -1.16
RTN3-204ENST00000354497 VPS13BQ7Z7G8 4022 aa7.83□□□□□ -1.16
RTN3-204ENST00000354497 TRBV25-1A0A075B6N4 114 aa7.82□□□□□ -1.16
RTN3-204ENST00000354497 LINC01546A6NGU7 62 aa7.82□□□□□ -1.16
RTN3-204ENST00000354497 LINC00694P0DN24 101 aa7.82□□□□□ -1.16
RTN3-204ENST00000354497 RPL7P18124 248 aaKnown RBP7.82□□□□□ -1.16
RTN3-204ENST00000354497 IZUMO4Q1ZYL8 232 aa7.82□□□□□ -1.16
RTN3-204ENST00000354497 LYPD1Q8N2G4 141 aa7.82□□□□□ -1.16
RTN3-204ENST00000354497 C3orf22Q8N5N4 141 aa7.82□□□□□ -1.16
RTN3-204ENST00000354497 HIGD1CA8MV81 97 aa7.81□□□□□ -1.16
RTN3-204ENST00000354497 PRSS46E5RG02 174 aa7.81□□□□□ -1.16
RTN3-204ENST00000354497 SCGB1C2P0DMR2 95 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms