RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TRGV1A0A0A0MS02 117 aa4.95□□□□□ -1.62
TRIM55-203ENST00000350034 A0A1B0GV90 55 aa4.95□□□□□ -1.62
TRIM55-203ENST00000350034 CIDEAO60543 219 aa4.95□□□□□ -1.62
TRIM55-203ENST00000350034 NPSP0C0P6 89 aa4.95□□□□□ -1.62
TRIM55-203ENST00000350034 RPL39P62891 51 aaKnown RBP4.95□□□□□ -1.62
TRIM55-203ENST00000350034 PMVKQ15126 192 aa4.95□□□□□ -1.62
TRIM55-203ENST00000350034 ZC2HC1BQ5TFG8 222 aa4.95□□□□□ -1.62
TRIM55-203ENST00000350034 Q6ZTI0 123 aa4.95□□□□□ -1.62
TRIM55-203ENST00000350034 LINC00612Q8N6U2 182 aa4.95□□□□□ -1.62
TRIM55-203ENST00000350034 OR4C5Q8NGB2 326 aa4.95□□□□□ -1.62
TRIM55-203ENST00000350034 FAM104AQ969W3 186 aa4.95□□□□□ -1.62
TRIM55-203ENST00000350034 CST9LQ9H4G1 147 aa4.95□□□□□ -1.62
TRIM55-203ENST00000350034 PYGO1Q9Y3Y4 419 aa4.95□□□□□ -1.62
TRIM55-203ENST00000350034 TNFRSF18Q9Y5U5 241 aa4.95□□□□□ -1.62
TRIM55-203ENST00000350034 RYR1P21817 5038 aa4.94□□□□□ -1.62
TRIM55-203ENST00000350034 IGLV4-69A0A075B6H9 119 aa4.94□□□□□ -1.62
TRIM55-203ENST00000350034 TRBV10-1A0A0K0K1A3 114 aa4.94□□□□□ -1.62
TRIM55-203ENST00000350034 CRYBA4P53673 196 aa4.94□□□□□ -1.62
TRIM55-203ENST00000350034 RRN3P1Q2M238 152 aa4.94□□□□□ -1.62
TRIM55-203ENST00000350034 PAPPA-AS1Q5QFB9 102 aa4.94□□□□□ -1.62
TRIM55-203ENST00000350034 COL5A1-AS1Q5SY13 56 aa4.94□□□□□ -1.62
TRIM55-203ENST00000350034 GTSCR1Q86UQ5 136 aa4.94□□□□□ -1.62
TRIM55-203ENST00000350034 PCP2Q8IVA1 136 aa4.94□□□□□ -1.62
TRIM55-203ENST00000350034 KIR2DL5BQ8NHK3 375 aa4.94□□□□□ -1.62
TRIM55-203ENST00000350034 ZNF479Q96JC4 524 aa4.94□□□□□ -1.62
TRIM55-203ENST00000350034 CHCHD7Q9BUK0 85 aa4.94□□□□□ -1.62
TRIM55-203ENST00000350034 NOP10Q9NPE3 64 aaKnown RBP4.94□□□□□ -1.62
TRIM55-203ENST00000350034 WNK1Q9H4A3 2382 aa4.93□□□□□ -1.62
TRIM55-203ENST00000350034 IGLV4-3A0A075B6K6 122 aa4.93□□□□□ -1.62
TRIM55-203ENST00000350034 SMIM9A6NGZ8 99 aa4.93□□□□□ -1.62
TRIM55-203ENST00000350034 C11orf86A6NJI1 115 aa4.93□□□□□ -1.62
TRIM55-203ENST00000350034 K7EQD1 137 aa4.93□□□□□ -1.62
TRIM55-203ENST00000350034 HINT1P49773 126 aaPredicted RBP4.93□□□□□ -1.62
TRIM55-203ENST00000350034 KRTAP24-1Q3LI83 254 aa4.93□□□□□ -1.62
TRIM55-203ENST00000350034 BVES-AS1Q5T3Y7 98 aa4.93□□□□□ -1.62
TRIM55-203ENST00000350034 C12orf54Q6X4T0 127 aa4.93□□□□□ -1.62
TRIM55-203ENST00000350034 NFE4Q86UQ8 179 aa4.93□□□□□ -1.62
TRIM55-203ENST00000350034 DEFB104AQ8WTQ1 72 aa4.93□□□□□ -1.62
TRIM55-203ENST00000350034 AMELXQ99217 191 aa4.93□□□□□ -1.62
TRIM55-203ENST00000350034 HIGD1BQ9P298 99 aa4.93□□□□□ -1.62
TRIM55-203ENST00000350034 X6R8D5 127 aa4.93□□□□□ -1.62
TRIM55-203ENST00000350034 TRBV7-3A0A075B6L6 115 aa4.92□□□□□ -1.62
TRIM55-203ENST00000350034 E9PLD3 99 aa4.92□□□□□ -1.62
TRIM55-203ENST00000350034 NMUP48645 174 aa4.92□□□□□ -1.62
TRIM55-203ENST00000350034 UBE2D3P61077 147 aa4.92□□□□□ -1.62
TRIM55-203ENST00000350034 UBE2D2P62837 147 aa4.92□□□□□ -1.62
TRIM55-203ENST00000350034 BATFQ16520 125 aa4.92□□□□□ -1.62
TRIM55-203ENST00000350034 MPV17L2Q567V2 206 aa4.92□□□□□ -1.62
TRIM55-203ENST00000350034 MAPKAPK5-AS1Q8N8E1 139 aa4.92□□□□□ -1.62
TRIM55-203ENST00000350034 OPRPNQ99935 248 aaPredicted RBP4.92□□□□□ -1.62
TRIM55-203ENST00000350034 TIMM21Q9BVV7 248 aa4.92□□□□□ -1.62
TRIM55-203ENST00000350034 SPANXA1Q9NS26 97 aa4.92□□□□□ -1.62
TRIM55-203ENST00000350034 NACAE9PAV3 2078 aa4.92□□□□□ -1.62
TRIM55-203ENST00000350034 TENM1Q9UKZ4 2725 aa4.91□□□□□ -1.62
TRIM55-203ENST00000350034 TRBV6-4A0A1B0GX49 114 aa4.91□□□□□ -1.62
TRIM55-203ENST00000350034 GAGE12BA1L429 117 aa4.91□□□□□ -1.62
TRIM55-203ENST00000350034 GAGE7O76087 117 aa4.91□□□□□ -1.62
TRIM55-203ENST00000350034 GAGE12FP0CL80 117 aa4.91□□□□□ -1.62
TRIM55-203ENST00000350034 GAGE12GP0CL81 117 aa4.91□□□□□ -1.62
TRIM55-203ENST00000350034 GAGE12IP0CL82 117 aa4.91□□□□□ -1.62
TRIM55-203ENST00000350034 LINC00694P0DN24 101 aa4.91□□□□□ -1.62
TRIM55-203ENST00000350034 TCTAP57738 103 aa4.91□□□□□ -1.62
TRIM55-203ENST00000350034 RPL36AP83881 106 aaKnown RBP4.91□□□□□ -1.62
TRIM55-203ENST00000350034 HSD52Q0P140 79 aa4.91□□□□□ -1.62
TRIM55-203ENST00000350034 COTL1Q14019 142 aa4.91□□□□□ -1.62
TRIM55-203ENST00000350034 FHL2Q14192 279 aa4.91□□□□□ -1.62
TRIM55-203ENST00000350034 DAZ4Q86SG3 579 aaKnown RBP4.91□□□□□ -1.62
TRIM55-203ENST00000350034 SLC25A29Q8N8R3 303 aa4.91□□□□□ -1.62
TRIM55-203ENST00000350034 ZNRF2Q8NHG8 242 aa4.91□□□□□ -1.62
TRIM55-203ENST00000350034 RPL36ALQ969Q0 106 aaKnown RBP4.91□□□□□ -1.62
TRIM55-203ENST00000350034 TTTY13Q9BZ97 58 aa4.91□□□□□ -1.62
TRIM55-203ENST00000350034 DAZ3Q9NR90 486 aaKnown RBP4.91□□□□□ -1.62
TRIM55-203ENST00000350034 UBE2D4Q9Y2X8 147 aa4.91□□□□□ -1.62
TRIM55-203ENST00000350034 UBR4Q5T4S7 5183 aa4.9□□□□□ -1.62
TRIM55-203ENST00000350034 TRBV25-1A0A075B6N4 114 aa4.9□□□□□ -1.63
TRIM55-203ENST00000350034 TRGV2A0A075B6R0 118 aa4.9□□□□□ -1.63
TRIM55-203ENST00000350034 APOC4P55056 127 aa4.9□□□□□ -1.63
TRIM55-203ENST00000350034 MRPS36P82909 103 aaKnown RBP4.9□□□□□ -1.63
TRIM55-203ENST00000350034 TMEM97Q5BJF2 176 aa4.9□□□□□ -1.63
TRIM55-203ENST00000350034 NTM-AS1Q6ZSK4 140 aa4.9□□□□□ -1.63
TRIM55-203ENST00000350034 SBSPONQ8IVN8 264 aa4.9□□□□□ -1.63
TRIM55-203ENST00000350034 PHLDA1Q8WV24 401 aaPredicted RBP4.9□□□□□ -1.63
TRIM55-203ENST00000350034 VCX2Q9H322 139 aa4.9□□□□□ -1.63
TRIM55-203ENST00000350034 IGHV3-38A0A0C4DH36 116 aa4.89□□□□□ -1.63
TRIM55-203ENST00000350034 MYMXA0A1B0GTQ4 84 aa4.89□□□□□ -1.63
TRIM55-203ENST00000350034 ZNF22P17026 224 aaPredicted RBP4.89□□□□□ -1.63
TRIM55-203ENST00000350034 SEC11AP67812 179 aa4.89□□□□□ -1.63
TRIM55-203ENST00000350034 OR11H2Q8NH07 326 aa4.89□□□□□ -1.63
TRIM55-203ENST00000350034 ORAOV1Q8WV07 137 aa4.89□□□□□ -1.63
TRIM55-203ENST00000350034 PRADC1Q9BSG0 188 aa4.89□□□□□ -1.63
TRIM55-203ENST00000350034 GTSF1LQ9H1H1 148 aa4.89□□□□□ -1.63
TRIM55-203ENST00000350034 CSDC2Q9Y534 153 aaKnown RBP4.89□□□□□ -1.63
TRIM55-203ENST00000350034 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.88□□□□□ -1.63
TRIM55-203ENST00000350034 TRAV8-6A0A0B4J262 113 aa4.88□□□□□ -1.63
TRIM55-203ENST00000350034 A0A0J9YXV3 536 aa4.88□□□□□ -1.63
TRIM55-203ENST00000350034 TMEM223A0PJW6 202 aa4.88□□□□□ -1.63
TRIM55-203ENST00000350034 IGKV2-29A2NJV5 120 aaPredicted RBP4.88□□□□□ -1.63
TRIM55-203ENST00000350034 GAGE12JA6NER3 117 aa4.88□□□□□ -1.63
TRIM55-203ENST00000350034 LYRM9A8MSI8 78 aa4.88□□□□□ -1.63
TRIM55-203ENST00000350034 TAX1BP3O14907 124 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms