RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 UBE2E2Q96LR5 201 aa11.52□□□□□ -0.56
COG3-201ENST00000349995 UBE2D3P61077 147 aa11.52□□□□□ -0.57
COG3-201ENST00000349995 UBE2D2P62837 147 aa11.52□□□□□ -0.57
COG3-201ENST00000349995 ZNF462Q96JM2 2506 aa11.52□□□□□ -0.57
COG3-201ENST00000349995 MIAQ16674 131 aa11.52□□□□□ -0.57
COG3-201ENST00000349995 VCANP13611 3396 aa11.51□□□□□ -0.57
COG3-201ENST00000349995 COX7A2LO14548 114 aa11.51□□□□□ -0.57
COG3-201ENST00000349995 SMCPP49901 116 aaPredicted RBP11.51□□□□□ -0.57
COG3-201ENST00000349995 ATG2AQ2TAZ0 1938 aa11.51□□□□□ -0.57
COG3-201ENST00000349995 LAMA1P25391 3075 aa11.51□□□□□ -0.57
COG3-201ENST00000349995 CTSGP08311 255 aa11.51□□□□□ -0.57
COG3-201ENST00000349995 VPS13AQ96RL7 3174 aa11.51□□□□□ -0.57
COG3-201ENST00000349995 H0YGX0 51 aa11.5□□□□□ -0.57
COG3-201ENST00000349995 C11orf44Q8N8P7 122 aa11.5□□□□□ -0.57
COG3-201ENST00000349995 MRPL55Q7Z7F7 128 aaKnown RBP11.5□□□□□ -0.57
COG3-201ENST00000349995 FAM110DQ8TAY7 271 aaPredicted RBP11.5□□□□□ -0.57
COG3-201ENST00000349995 MDFICQ9P1T7 246 aa11.5□□□□□ -0.57
COG3-201ENST00000349995 IGHV1-58A0A0C4DH39 117 aa11.5□□□□□ -0.57
COG3-201ENST00000349995 ADORA2A-AS1P86434 159 aa11.5□□□□□ -0.57
COG3-201ENST00000349995 BUB3O43684 328 aa11.5□□□□□ -0.57
COG3-201ENST00000349995 IGLV2-23P01705 113 aa11.49□□□□□ -0.57
COG3-201ENST00000349995 ENHOQ6UWT2 76 aa11.49□□□□□ -0.57
COG3-201ENST00000349995 SNURFQ9Y675 71 aa11.49□□□□□ -0.57
COG3-201ENST00000349995 TEX22C9J3V5 150 aa11.49□□□□□ -0.57
COG3-201ENST00000349995 RPL35AP18077 110 aaKnown RBP11.49□□□□□ -0.57
COG3-201ENST00000349995 UPK3BQ9BT76 320 aa11.49□□□□□ -0.57
COG3-201ENST00000349995 A0A087WVE0 104 aa11.48□□□□□ -0.57
COG3-201ENST00000349995 TRBV12-3P01733 135 aa11.48□□□□□ -0.57
COG3-201ENST00000349995 STHQ8IWL8 128 aa11.48□□□□□ -0.57
COG3-201ENST00000349995 SPTSSBQ8NFR3 76 aa11.48□□□□□ -0.57
COG3-201ENST00000349995 DSCAMO60469 2012 aa11.48□□□□□ -0.57
COG3-201ENST00000349995 POLQO75417 2590 aa11.48□□□□□ -0.57
COG3-201ENST00000349995 NDUFC2-KCTD14E9PQ53 114 aa11.48□□□□□ -0.57
COG3-201ENST00000349995 PRO0461Q9UI25 63 aa11.48□□□□□ -0.57
COG3-201ENST00000349995 CGB3P0DN86 165 aa11.47□□□□□ -0.57
COG3-201ENST00000349995 CGB7P0DN87 165 aa11.47□□□□□ -0.57
COG3-201ENST00000349995 ABCA12Q86UK0 2595 aa11.47□□□□□ -0.57
COG3-201ENST00000349995 LST1O00453 97 aa11.47□□□□□ -0.57
COG3-201ENST00000349995 LENEPQ9Y5L5 61 aa11.47□□□□□ -0.57
COG3-201ENST00000349995 EXPH5Q8NEV8 1989 aa11.47□□□□□ -0.57
COG3-201ENST00000349995 LINC01548A6NM66 108 aa11.47□□□□□ -0.57
COG3-201ENST00000349995 B4DSR2 109 aa11.47□□□□□ -0.57
COG3-201ENST00000349995 TIMM17BO60830 172 aa11.47□□□□□ -0.57
COG3-201ENST00000349995 DEFB131AP59861 70 aa11.47□□□□□ -0.57
COG3-201ENST00000349995 C20orf203Q8NBC4 194 aa11.47□□□□□ -0.57
COG3-201ENST00000349995 FANCD2OSQ96PS1 177 aa11.47□□□□□ -0.57
COG3-201ENST00000349995 FAM240AA0A1B0GVK7 77 aa11.47□□□□□ -0.57
COG3-201ENST00000349995 LINC01619G3V211 115 aa11.47□□□□□ -0.57
COG3-201ENST00000349995 TIRAPP58753 221 aa11.47□□□□□ -0.57
COG3-201ENST00000349995 A8MZ25 164 aa11.46□□□□□ -0.57
COG3-201ENST00000349995 COX7B2Q8TF08 81 aa11.46□□□□□ -0.57
COG3-201ENST00000349995 CPAMD8Q8IZJ3 1885 aa11.46□□□□□ -0.57
COG3-201ENST00000349995 TMEM263Q8WUH6 116 aaKnown RBP11.45□□□□□ -0.58
COG3-201ENST00000349995 EPG5Q9HCE0 2579 aa11.45□□□□□ -0.58
COG3-201ENST00000349995 SLPIP03973 132 aa11.45□□□□□ -0.58
COG3-201ENST00000349995 A0A1W2PRX2 142 aa11.45□□□□□ -0.58
COG3-201ENST00000349995 NCR3O14931 201 aa11.45□□□□□ -0.58
COG3-201ENST00000349995 HTN3P15516 51 aa11.45□□□□□ -0.58
COG3-201ENST00000349995 C5orf38Q86SI9 138 aa11.45□□□□□ -0.58
COG3-201ENST00000349995 IGLV11-55A0A075B6I3 123 aa11.44□□□□□ -0.58
COG3-201ENST00000349995 HIVEP2P31629 2446 aa11.44□□□□□ -0.58
COG3-201ENST00000349995 CFHR3Q02985 330 aa11.44□□□□□ -0.58
COG3-201ENST00000349995 NRACQ8N912 160 aa11.44□□□□□ -0.58
COG3-201ENST00000349995 WFDC9Q8NEX5 89 aa11.44□□□□□ -0.58
COG3-201ENST00000349995 C4orf26Q17RF5 130 aa11.44□□□□□ -0.58
COG3-201ENST00000349995 Q6ZSV7 163 aa11.43□□□□□ -0.58
COG3-201ENST00000349995 MIR7-3HGQ8N6C7 128 aa11.43□□□□□ -0.58
COG3-201ENST00000349995 XCL2Q9UBD3 114 aa11.43□□□□□ -0.58
COG3-201ENST00000349995 ZMAT4Q9H898 229 aa11.43□□□□□ -0.58
COG3-201ENST00000349995 JMJD1CQ15652 2540 aa11.43□□□□□ -0.58
COG3-201ENST00000349995 VSIG2Q96IQ7 327 aa11.43□□□□□ -0.58
COG3-201ENST00000349995 TMEM223A0PJW6 202 aa11.43□□□□□ -0.58
COG3-201ENST00000349995 IGLV1-47P01700 117 aa11.43□□□□□ -0.58
COG3-201ENST00000349995 COL4A2P08572 1712 aa11.42□□□□□ -0.58
COG3-201ENST00000349995 JMJD7-PLA2G4BH0Y9G9 81 aa11.42□□□□□ -0.58
COG3-201ENST00000349995 MRPL53Q96EL3 112 aaKnown RBP11.42□□□□□ -0.58
COG3-201ENST00000349995 IGF1P05019 195 aa11.42□□□□□ -0.58
COG3-201ENST00000349995 MSMBP08118 114 aa11.42□□□□□ -0.58
COG3-201ENST00000349995 RNF223E7ERA6 249 aa11.42□□□□□ -0.58
COG3-201ENST00000349995 HIST2H2BCQ6DN03 193 aa11.42□□□□□ -0.58
COG3-201ENST00000349995 HIST2H2BDQ6DRA6 164 aa11.42□□□□□ -0.58
COG3-201ENST00000349995 ODF3Q96PU9 254 aa11.42□□□□□ -0.58
COG3-201ENST00000349995 FAM223BA6NKX1 122 aa11.41□□□□□ -0.58
COG3-201ENST00000349995 FAM223AQ8IWN6 122 aa11.41□□□□□ -0.58
COG3-201ENST00000349995 IGHV1-69P01742 117 aa11.41□□□□□ -0.58
COG3-201ENST00000349995 C9orf47Q6ZRZ4 202 aa11.41□□□□□ -0.58
COG3-201ENST00000349995 COL5A1P20908 1838 aaPredicted RBP11.41□□□□□ -0.58
COG3-201ENST00000349995 SS18Q15532 418 aa11.4□□□□□ -0.58
COG3-201ENST00000349995 SCXQ7RTU7 201 aa11.4□□□□□ -0.58
COG3-201ENST00000349995 USMG5Q96IX5 58 aa11.4□□□□□ -0.58
COG3-201ENST00000349995 IGHV4-4A0A075B6R2 117 aa11.4□□□□□ -0.59
COG3-201ENST00000349995 SOSTDC1Q6X4U4 206 aa11.4□□□□□ -0.59
COG3-201ENST00000349995 CDKN2A-AS1Q9UH64 79 aa11.4□□□□□ -0.59
COG3-201ENST00000349995 PIK3CD-AS1Q5SR53 167 aa11.39□□□□□ -0.59
COG3-201ENST00000349995 SMIM26A0A096LP01 95 aa11.39□□□□□ -0.59
COG3-201ENST00000349995 ZFP36P26651 326 aaKnown RBP11.39□□□□□ -0.59
COG3-201ENST00000349995 CLPSL2Q6UWE3 100 aa11.39□□□□□ -0.59
COG3-201ENST00000349995 SEC61GP60059 68 aa11.39□□□□□ -0.59
COG3-201ENST00000349995 IGHV4-28A0A0C4DH34 117 aa11.38□□□□□ -0.59
COG3-201ENST00000349995 MTORP42345 2549 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms