RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 FHL3Q13643 280 aa4.39□□□□□ -1.71
CLCN3-201ENST00000347613 OR11H2Q8NH07 326 aa4.39□□□□□ -1.71
CLCN3-201ENST00000347613 CMYA5Q8N3K9 4069 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 TRAV8-3A0A0A6YYJ7 113 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 LINC01549A6NIU2 74 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 H3BMM0 161 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 NDUFA7O95182 113 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 FABP2P12104 132 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 SEC61GP60059 68 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 WFDC11Q8NEX6 87 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 Q96MF0 132 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 IGLV4-3A0A075B6K6 122 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 VCYO14598 125 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 IGHV3-30P01768 117 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 CFC1BP0CG36 223 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 CFC1P0CG37 223 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 IGHV3-30-5P0DP03 117 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 UBE2D1P51668 147 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 PMVKQ15126 192 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 RRN3P1Q2M238 152 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 ETDBQ3ZM63 59 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 TMEM170BQ5T4T1 132 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 NFE4Q86UQ8 179 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 OR5A1Q8NGJ0 315 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 UBE2E2Q96LR5 201 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 SPANXB1Q9NS25 103 aaPredicted RBP4.38□□□□□ -1.71
CLCN3-201ENST00000347613 TRBV6-5A0A0K0K1A5 114 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 GTF2H5Q6ZYL4 71 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 C10orf126Q8N4M7 172 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 C11orf72Q8NBR9 251 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 WFDC10AQ9H1F0 79 aa4.38□□□□□ -1.71
CLCN3-201ENST00000347613 APOMO95445 188 aa4.37□□□□□ -1.71
CLCN3-201ENST00000347613 ZNF22P17026 224 aaPredicted RBP4.37□□□□□ -1.71
CLCN3-201ENST00000347613 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.37□□□□□ -1.71
CLCN3-201ENST00000347613 IGKV2-29A2NJV5 120 aaPredicted RBP4.37□□□□□ -1.71
CLCN3-201ENST00000347613 CD28P10747 220 aa4.37□□□□□ -1.71
CLCN3-201ENST00000347613 SNRPD3P62318 126 aaKnown RBP4.37□□□□□ -1.71
CLCN3-201ENST00000347613 RPL24P83731 157 aaKnown RBP4.37□□□□□ -1.71
CLCN3-201ENST00000347613 ADAMTSL4-AS1Q5T5F5 129 aa4.37□□□□□ -1.71
CLCN3-201ENST00000347613 C20orf203Q8NBC4 194 aa4.37□□□□□ -1.71
CLCN3-201ENST00000347613 MRPL16Q9NX20 251 aaKnown RBP4.37□□□□□ -1.71
CLCN3-201ENST00000347613 FN1P02751 2386 aaKnown RBP4.37□□□□□ -1.71
CLCN3-201ENST00000347613 TMEM223A0PJW6 202 aa4.36□□□□□ -1.71
CLCN3-201ENST00000347613 RPL32P62910 135 aaKnown RBP4.36□□□□□ -1.71
CLCN3-201ENST00000347613 CHCHD7Q9BUK0 85 aa4.36□□□□□ -1.71
CLCN3-201ENST00000347613 MAP6D1Q9H9H5 199 aa4.36□□□□□ -1.71
CLCN3-201ENST00000347613 TMEM89A2RUT3 159 aa4.36□□□□□ -1.71
CLCN3-201ENST00000347613 GATA3P23771 443 aa4.36□□□□□ -1.71
CLCN3-201ENST00000347613 CFAP126Q5VTH2 177 aa4.36□□□□□ -1.71
CLCN3-201ENST00000347613 ODF3L2Q3SX64 289 aa4.36□□□□□ -1.71
CLCN3-201ENST00000347613 C5orf47Q569G3 176 aa4.36□□□□□ -1.71
CLCN3-201ENST00000347613 SCGB1D4Q6XE38 83 aa4.36□□□□□ -1.71
CLCN3-201ENST00000347613 NDUFA11Q86Y39 141 aa4.36□□□□□ -1.71
CLCN3-201ENST00000347613 RAX2Q96IS3 184 aa4.36□□□□□ -1.71
CLCN3-201ENST00000347613 ODF3Q96PU9 254 aa4.36□□□□□ -1.71
CLCN3-201ENST00000347613 TIMM17AQ99595 171 aa4.36□□□□□ -1.71
CLCN3-201ENST00000347613 KIR2DL4Q99706 377 aa4.36□□□□□ -1.71
CLCN3-201ENST00000347613 LITAFQ99732 161 aa4.36□□□□□ -1.71
CLCN3-201ENST00000347613 LINC00694P0DN24 101 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 COX6A2Q02221 97 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 DEFB114Q30KQ6 69 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 DEFB113Q30KQ7 82 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 NSUN5P1Q3KNT7 163 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 Q8N2B8 174 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 SLC25A29Q8N8R3 303 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 SPATA3Q8NHX4 192 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 NOTCH2Q04721 2471 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 HIVEP1P15822 2718 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 A8MTW9 85 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 J3QQQ9 107 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 RHODO00212 210 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 TCL1BO95988 128 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 GIG44P09565 113 aaPredicted RBP4.35□□□□□ -1.71
CLCN3-201ENST00000347613 TAL2Q16559 108 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 KHDC1LQ5JSQ8 128 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 C1orf158Q8N1D5 194 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 CARD19Q96LW7 228 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 LINC00467Q9BRT7 94 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 XCL2Q9UBD3 114 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 TRAV2A0A0B4J234 112 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 A0A0U1RRA0 63 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 LINC01619G3V211 115 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 NPC2P61916 151 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 KRTAP1-1Q07627 177 aa4.35□□□□□ -1.71
CLCN3-201ENST00000347613 IGHV3OR16-12A0A075B7B8 117 aa4.34□□□□□ -1.71
CLCN3-201ENST00000347613 I3L3M4 83 aa4.34□□□□□ -1.71
CLCN3-201ENST00000347613 SRSF9Q13242 221 aaKnown RBP eCLIP4.34□□□□□ -1.71
CLCN3-201ENST00000347613 TRPT1Q86TN4 253 aaKnown RBP4.34□□□□□ -1.71
CLCN3-201ENST00000347613 MUSTN1Q8IVN3 82 aa4.34□□□□□ -1.71
CLCN3-201ENST00000347613 K7ERU9 68 aa4.34□□□□□ -1.71
CLCN3-201ENST00000347613 DSCR9P59020 149 aa4.34□□□□□ -1.71
CLCN3-201ENST00000347613 UBE2D3P61077 147 aa4.34□□□□□ -1.71
CLCN3-201ENST00000347613 UBE2D2P62837 147 aa4.34□□□□□ -1.71
CLCN3-201ENST00000347613 DAND5Q8N907 189 aa4.34□□□□□ -1.71
CLCN3-201ENST00000347613 J3QLI3 93 aa4.34□□□□□ -1.72
CLCN3-201ENST00000347613 Q6ZUT4 128 aa4.34□□□□□ -1.72
CLCN3-201ENST00000347613 TMEM141Q96I45 108 aa4.34□□□□□ -1.72
CLCN3-201ENST00000347613 SMR3AQ99954 134 aa4.34□□□□□ -1.72
CLCN3-201ENST00000347613 GTSF1LQ9H1H1 148 aa4.34□□□□□ -1.72
CLCN3-201ENST00000347613 CDIP1Q9H305 208 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms