RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 MRPL51Q4U2R6 128 aaKnown RBP8.09□□□□□ -1.11
SNCA-202ENST00000345009 LINC01556Q5JQF7 62 aa8.09□□□□□ -1.11
SNCA-202ENST00000345009 WFDC10BQ8IUB3 73 aa8.09□□□□□ -1.11
SNCA-202ENST00000345009 SACSQ9NZJ4 4579 aa8.09□□□□□ -1.11
SNCA-202ENST00000345009 SDHAF1A6NFY7 115 aa8.08□□□□□ -1.12
SNCA-202ENST00000345009 TMEM262E9PQX1 116 aa8.08□□□□□ -1.12
SNCA-202ENST00000345009 NCR2O95944 276 aa8.08□□□□□ -1.12
SNCA-202ENST00000345009 PMCHP20382 165 aa8.08□□□□□ -1.12
SNCA-202ENST00000345009 ELOBQ15370 118 aa8.08□□□□□ -1.12
SNCA-202ENST00000345009 C1orf134Q5TEV5 83 aa8.08□□□□□ -1.12
SNCA-202ENST00000345009 Q6ZR54 194 aa8.08□□□□□ -1.12
SNCA-202ENST00000345009 ORMDL3Q8N138 153 aa8.08□□□□□ -1.12
SNCA-202ENST00000345009 RPL39LQ96EH5 51 aaKnown RBP8.08□□□□□ -1.12
SNCA-202ENST00000345009 CHCHD5Q9BSY4 110 aa8.08□□□□□ -1.12
SNCA-202ENST00000345009 CHCHD7Q9BUK0 85 aa8.08□□□□□ -1.12
SNCA-202ENST00000345009 I3L3M4 83 aa8.07□□□□□ -1.12
SNCA-202ENST00000345009 VCYO14598 125 aa8.07□□□□□ -1.12
SNCA-202ENST00000345009 TMEM136Q6ZRR5 245 aa8.07□□□□□ -1.12
SNCA-202ENST00000345009 C20orf78Q9BR46 151 aa8.07□□□□□ -1.12
SNCA-202ENST00000345009 TRBV24-1A0A075B6N3 115 aa8.06□□□□□ -1.12
SNCA-202ENST00000345009 D6R8Y8 96 aa8.06□□□□□ -1.12
SNCA-202ENST00000345009 PHOX2AO14813 284 aa8.06□□□□□ -1.12
SNCA-202ENST00000345009 UBE2L6O14933 153 aa8.06□□□□□ -1.12
SNCA-202ENST00000345009 TCAPO15273 167 aa8.06□□□□□ -1.12
SNCA-202ENST00000345009 AMTP48728 403 aa8.06□□□□□ -1.12
SNCA-202ENST00000345009 SUMO2P61956 95 aaKnown RBP8.06□□□□□ -1.12
SNCA-202ENST00000345009 IQCJQ1A5X6 159 aa8.06□□□□□ -1.12
SNCA-202ENST00000345009 NFE4Q86UQ8 179 aa8.06□□□□□ -1.12
SNCA-202ENST00000345009 KIR2DL4Q99706 377 aa8.06□□□□□ -1.12
SNCA-202ENST00000345009 TMEM243Q9BU79 118 aa8.06□□□□□ -1.12
SNCA-202ENST00000345009 LAMTOR2Q9Y2Q5 125 aa8.06□□□□□ -1.12
SNCA-202ENST00000345009 KMT2AQ03164 3969 aa8.06□□□□□ -1.12
SNCA-202ENST00000345009 TRBV27A0A0K0K1C4 114 aa8.05□□□□□ -1.12
SNCA-202ENST00000345009 SMKR1H3BMG3 65 aa8.05□□□□□ -1.12
SNCA-202ENST00000345009 IGHV3-30P01768 117 aa8.05□□□□□ -1.12
SNCA-202ENST00000345009 IGHV3-33P01772 117 aa8.05□□□□□ -1.12
SNCA-202ENST00000345009 HLA-DQA1P01909 254 aa8.05□□□□□ -1.12
SNCA-202ENST00000345009 MT-ND6P03923 174 aa8.05□□□□□ -1.12
SNCA-202ENST00000345009 IGHV3-30-3P0DP02 117 aa8.05□□□□□ -1.12
SNCA-202ENST00000345009 IGHV3-30-5P0DP03 117 aa8.05□□□□□ -1.12
SNCA-202ENST00000345009 NIT1Q86X76 327 aa8.05□□□□□ -1.12
SNCA-202ENST00000345009 C6orf223Q8N319 242 aa8.05□□□□□ -1.12
SNCA-202ENST00000345009 TMEM70Q9BUB7 260 aa8.05□□□□□ -1.12
SNCA-202ENST00000345009 GNB1LQ9BYB4 327 aa8.05□□□□□ -1.12
SNCA-202ENST00000345009 RYR2Q92736 4967 aa8.05□□□□□ -1.12
SNCA-202ENST00000345009 TNFRSF6BO95407 300 aa8.04□□□□□ -1.12
SNCA-202ENST00000345009 APCSP02743 223 aa8.04□□□□□ -1.12
SNCA-202ENST00000345009 FCER1GP30273 86 aa8.04□□□□□ -1.12
SNCA-202ENST00000345009 RPS10P46783 165 aaKnown RBP8.04□□□□□ -1.12
SNCA-202ENST00000345009 POLR2KP53803 58 aaKnown RBP8.04□□□□□ -1.12
SNCA-202ENST00000345009 NTM-AS1Q6ZSK4 140 aa8.04□□□□□ -1.12
SNCA-202ENST00000345009 LINC00336Q6ZUF6 198 aa8.04□□□□□ -1.12
SNCA-202ENST00000345009 NRACQ8N912 160 aa8.04□□□□□ -1.12
SNCA-202ENST00000345009 PRELID3AQ96N28 172 aa8.04□□□□□ -1.12
SNCA-202ENST00000345009 SMCO4Q9NRQ5 59 aa8.04□□□□□ -1.12
SNCA-202ENST00000345009 AP5S1Q9NUS5 200 aa8.04□□□□□ -1.12
SNCA-202ENST00000345009 TRAV8-3A0A0A6YYJ7 113 aa8.03□□□□□ -1.12
SNCA-202ENST00000345009 H7C423 109 aa8.03□□□□□ -1.12
SNCA-202ENST00000345009 GAS8-AS1O95177 125 aa8.03□□□□□ -1.12
SNCA-202ENST00000345009 RPL32P62910 135 aaKnown RBP8.03□□□□□ -1.12
SNCA-202ENST00000345009 SMAGPQ0VAQ4 97 aa8.03□□□□□ -1.12
SNCA-202ENST00000345009 LAGE3Q14657 143 aa8.03□□□□□ -1.12
SNCA-202ENST00000345009 IBA57-AS1B1ANH7 110 aa8.02□□□□□ -1.13
SNCA-202ENST00000345009 RAB5AP20339 215 aa8.02□□□□□ -1.13
SNCA-202ENST00000345009 AMMECR1LQ6DCA0 310 aa8.02□□□□□ -1.13
SNCA-202ENST00000345009 RYR3Q15413 4870 aa8.02□□□□□ -1.13
SNCA-202ENST00000345009 HYDINQ4G0P3 5121 aa8.01□□□□□ -1.13
SNCA-202ENST00000345009 A0A1B0GUV1 79 aa8.01□□□□□ -1.13
SNCA-202ENST00000345009 ANGP03950 147 aaKnown RBP8.01□□□□□ -1.13
SNCA-202ENST00000345009 Q0VG73 95 aa8.01□□□□□ -1.13
SNCA-202ENST00000345009 FABP9Q0Z7S8 132 aa8.01□□□□□ -1.13
SNCA-202ENST00000345009 GAGE6Q13070 117 aa8.01□□□□□ -1.13
SNCA-202ENST00000345009 ATRAIDQ6UW56 229 aa8.01□□□□□ -1.13
SNCA-202ENST00000345009 TMEM18Q96B42 140 aa8.01□□□□□ -1.13
SNCA-202ENST00000345009 RMI2Q96E14 147 aa8.01□□□□□ -1.13
SNCA-202ENST00000345009 SMIM2Q9BVW6 85 aa8.01□□□□□ -1.13
SNCA-202ENST00000345009 MAP1LC3AQ9H492 121 aa8.01□□□□□ -1.13
SNCA-202ENST00000345009 COX11Q9Y6N1 276 aa8.01□□□□□ -1.13
SNCA-202ENST00000345009 TSHBP01222 138 aa8□□□□□ -1.13
SNCA-202ENST00000345009 NPYP01303 97 aa8□□□□□ -1.13
SNCA-202ENST00000345009 CRPP02741 224 aa8□□□□□ -1.13
SNCA-202ENST00000345009 ANKRD39Q53RE8 183 aa8□□□□□ -1.13
SNCA-202ENST00000345009 DEFB104AQ8WTQ1 72 aa8□□□□□ -1.13
SNCA-202ENST00000345009 TMEM101Q96IK0 257 aa8□□□□□ -1.13
SNCA-202ENST00000345009 TM2D2Q9BX73 214 aa8□□□□□ -1.13
SNCA-202ENST00000345009 KRTAP1-5Q9BYS1 174 aa8□□□□□ -1.13
SNCA-202ENST00000345009 KLK12Q9UKR0 248 aa8□□□□□ -1.13
SNCA-202ENST00000345009 DNAH6Q9C0G6 4158 aa8□□□□□ -1.13
SNCA-202ENST00000345009 TGIF2-C20orf24A0A0A6YYL0 155 aa7.99□□□□□ -1.13
SNCA-202ENST00000345009 PSCAO43653 123 aa7.99□□□□□ -1.13
SNCA-202ENST00000345009 ZNF25P17030 456 aaPredicted RBP7.99□□□□□ -1.13
SNCA-202ENST00000345009 RBX1P62877 108 aa7.99□□□□□ -1.13
SNCA-202ENST00000345009 MPV17L2Q567V2 206 aa7.99□□□□□ -1.13
SNCA-202ENST00000345009 RNASEKQ6P5S7 137 aaKnown RBP7.99□□□□□ -1.13
SNCA-202ENST00000345009 TRAPPC1Q9Y5R8 145 aa7.99□□□□□ -1.13
SNCA-202ENST00000345009 LOC389332A0A1B0GUA5 103 aa7.98□□□□□ -1.13
SNCA-202ENST00000345009 PRSS47A8MTI9 375 aa7.98□□□□□ -1.13
SNCA-202ENST00000345009 K7EMI3 77 aa7.98□□□□□ -1.13
SNCA-202ENST00000345009 G0S2P27469 103 aa7.98□□□□□ -1.13
SNCA-202ENST00000345009 DGAT2L7PQ6IED9 249 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms