RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 TMEM223A0PJW6 202 aa10.44□□□□□ -0.74
TRIO-202ENST00000344204 PMAIP1Q13794 54 aa10.44□□□□□ -0.74
TRIO-202ENST00000344204 KLK5Q9Y337 293 aaPredicted RBP10.44□□□□□ -0.74
TRIO-202ENST00000344204 PRORYQ9H606 182 aa10.44□□□□□ -0.74
TRIO-202ENST00000344204 IGHV4-28A0A0C4DH34 117 aa10.44□□□□□ -0.74
TRIO-202ENST00000344204 LHBP01229 141 aa10.43□□□□□ -0.74
TRIO-202ENST00000344204 UBE2BP63146 152 aa10.43□□□□□ -0.74
TRIO-202ENST00000344204 RNF185Q96GF1 192 aa10.43□□□□□ -0.74
TRIO-202ENST00000344204 RPS28P62857 69 aaKnown RBP10.43□□□□□ -0.74
TRIO-202ENST00000344204 NDUFA1O15239 70 aa10.43□□□□□ -0.74
TRIO-202ENST00000344204 C11orf44Q8N8P7 122 aa10.43□□□□□ -0.74
TRIO-202ENST00000344204 IGHV4-4A0A075B6R2 117 aa10.43□□□□□ -0.74
TRIO-202ENST00000344204 PRAC2D3DTV9 90 aa10.43□□□□□ -0.74
TRIO-202ENST00000344204 UBE2AP49459 152 aa10.43□□□□□ -0.74
TRIO-202ENST00000344204 CHKB-CPT1BH3BT56 60 aa10.42□□□□□ -0.74
TRIO-202ENST00000344204 H3BUX3 64 aa10.42□□□□□ -0.74
TRIO-202ENST00000344204 A6NED7 52 aa10.42□□□□□ -0.74
TRIO-202ENST00000344204 TIRAPP58753 221 aa10.42□□□□□ -0.74
TRIO-202ENST00000344204 DEFB130BP0DP73 79 aa10.42□□□□□ -0.74
TRIO-202ENST00000344204 DEFB130AP0DP74 79 aa10.42□□□□□ -0.74
TRIO-202ENST00000344204 XCL2Q9UBD3 114 aa10.42□□□□□ -0.74
TRIO-202ENST00000344204 NDUFS5O43920 106 aa10.42□□□□□ -0.74
TRIO-202ENST00000344204 HIGD2BQ4VC39 106 aa10.42□□□□□ -0.74
TRIO-202ENST00000344204 FLG2Q5D862 2391 aaPredicted RBP10.42□□□□□ -0.74
TRIO-202ENST00000344204 CLPSL2Q6UWE3 100 aa10.42□□□□□ -0.74
TRIO-202ENST00000344204 DEFB105AQ8NG35 78 aa10.41□□□□□ -0.74
TRIO-202ENST00000344204 RITA1Q96K30 269 aa10.41□□□□□ -0.74
TRIO-202ENST00000344204 BPTFQ12830 3046 aa10.41□□□□□ -0.74
TRIO-202ENST00000344204 NSUN5P1Q3KNT7 163 aa10.41□□□□□ -0.74
TRIO-202ENST00000344204 Q6ZPA2 131 aa10.41□□□□□ -0.74
TRIO-202ENST00000344204 COL4A4P53420 1690 aaPredicted RBP10.41□□□□□ -0.74
TRIO-202ENST00000344204 MUC22E2RYF6 1773 aaPredicted RBP10.41□□□□□ -0.74
TRIO-202ENST00000344204 GNLYP22749 145 aa10.41□□□□□ -0.74
TRIO-202ENST00000344204 C20orf203Q8NBC4 194 aa10.41□□□□□ -0.74
TRIO-202ENST00000344204 IGLV3-9A0A075B6K5 115 aa10.41□□□□□ -0.74
TRIO-202ENST00000344204 BPY2O14599 106 aa10.41□□□□□ -0.74
TRIO-202ENST00000344204 IGLV2-23P01705 113 aa10.41□□□□□ -0.74
TRIO-202ENST00000344204 TRAV7A0A075B6U4 112 aa10.41□□□□□ -0.74
TRIO-202ENST00000344204 IGLV1-44P01699 117 aa10.41□□□□□ -0.74
TRIO-202ENST00000344204 IGLV11-55A0A075B6I3 123 aa10.41□□□□□ -0.74
TRIO-202ENST00000344204 MIR7-3HGQ8N6C7 128 aa10.4□□□□□ -0.74
TRIO-202ENST00000344204 AJUBAQ96IF1 538 aa10.4□□□□□ -0.74
TRIO-202ENST00000344204 SP5Q6BEB4 398 aaPredicted RBP10.4□□□□□ -0.74
TRIO-202ENST00000344204 FAM19A3Q7Z5A8 133 aa10.4□□□□□ -0.74
TRIO-202ENST00000344204 CTSGP08311 255 aa10.4□□□□□ -0.74
TRIO-202ENST00000344204 J3QLI3 93 aa10.4□□□□□ -0.75
TRIO-202ENST00000344204 DEFB123Q8N688 67 aa10.4□□□□□ -0.75
TRIO-202ENST00000344204 IGLV2-11P01706 119 aa10.39□□□□□ -0.75
TRIO-202ENST00000344204 ZNF22P17026 224 aaPredicted RBP10.39□□□□□ -0.75
TRIO-202ENST00000344204 NRACQ8N912 160 aa10.39□□□□□ -0.75
TRIO-202ENST00000344204 EIF4EBP1Q13541 118 aaPredicted RBP10.39□□□□□ -0.75
TRIO-202ENST00000344204 TRBV7-7A0A0K0K1E9 115 aa10.39□□□□□ -0.75
TRIO-202ENST00000344204 COL8A2P25067 703 aa10.39□□□□□ -0.75
TRIO-202ENST00000344204 MBD3L4A6NDZ8 208 aaPredicted RBP10.39□□□□□ -0.75
TRIO-202ENST00000344204 MBD3L3A6NE82 208 aaPredicted RBP10.39□□□□□ -0.75
TRIO-202ENST00000344204 MBD3L5A6NJ08 208 aaPredicted RBP10.39□□□□□ -0.75
TRIO-202ENST00000344204 NPBQ8NG41 125 aa10.39□□□□□ -0.75
TRIO-202ENST00000344204 HHLA3Q9XRX5 114 aa10.39□□□□□ -0.75
TRIO-202ENST00000344204 CRIP3Q6Q6R5 217 aa10.39□□□□□ -0.75
TRIO-202ENST00000344204 UBE2D1P51668 147 aa10.39□□□□□ -0.75
TRIO-202ENST00000344204 MIFP14174 115 aa10.39□□□□□ -0.75
TRIO-202ENST00000344204 LINC00308Q8TCZ7 52 aa10.39□□□□□ -0.75
TRIO-202ENST00000344204 C5orf38Q86SI9 138 aa10.38□□□□□ -0.75
TRIO-202ENST00000344204 AKAP13Q12802 2813 aa10.38□□□□□ -0.75
TRIO-202ENST00000344204 KAAG1Q9UBP8 84 aa10.37□□□□□ -0.75
TRIO-202ENST00000344204 ANGP03950 147 aaKnown RBP10.37□□□□□ -0.75
TRIO-202ENST00000344204 MYCNOSP40205 109 aa10.37□□□□□ -0.75
TRIO-202ENST00000344204 ZNF80P51504 273 aaPredicted RBP10.37□□□□□ -0.75
TRIO-202ENST00000344204 LY6DQ14210 128 aa10.37□□□□□ -0.75
TRIO-202ENST00000344204 K7EQD1 137 aa10.37□□□□□ -0.75
TRIO-202ENST00000344204 ZMAT4Q9H898 229 aa10.37□□□□□ -0.75
TRIO-202ENST00000344204 BRD3OSQ6XYD6 125 aa10.36□□□□□ -0.75
TRIO-202ENST00000344204 FAM222AQ5U5X8 452 aa10.36□□□□□ -0.75
TRIO-202ENST00000344204 E7EQL1 145 aa10.36□□□□□ -0.75
TRIO-202ENST00000344204 A0A0G2JNJ9 132 aa10.35□□□□□ -0.75
TRIO-202ENST00000344204 Q9UFV3 132 aa10.35□□□□□ -0.75
TRIO-202ENST00000344204 CR1P17927 2039 aa10.35□□□□□ -0.75
TRIO-202ENST00000344204 NDUFB1O75438 58 aa10.35□□□□□ -0.75
TRIO-202ENST00000344204 BRWD1-AS2P59051 145 aa10.35□□□□□ -0.75
TRIO-202ENST00000344204 CRIP1P50238 77 aa10.35□□□□□ -0.75
TRIO-202ENST00000344204 H3BUA1 57 aa10.35□□□□□ -0.75
TRIO-202ENST00000344204 C4orf26Q17RF5 130 aa10.35□□□□□ -0.75
TRIO-202ENST00000344204 COX6B1P14854 86 aa10.34□□□□□ -0.75
TRIO-202ENST00000344204 DIRC1Q969H9 104 aa10.34□□□□□ -0.75
TRIO-202ENST00000344204 A0A0J9YX75 114 aa10.34□□□□□ -0.75
TRIO-202ENST00000344204 E7EUB6 86 aa10.34□□□□□ -0.75
TRIO-202ENST00000344204 Q6ZS46 218 aa10.34□□□□□ -0.75
TRIO-202ENST00000344204 PRSS33Q8NF86 280 aa10.34□□□□□ -0.75
TRIO-202ENST00000344204 URB1-AS1Q96HZ7 61 aa10.32□□□□□ -0.76
TRIO-202ENST00000344204 SLPIP03973 132 aa10.32□□□□□ -0.76
TRIO-202ENST00000344204 COX7BP24311 80 aa10.32□□□□□ -0.76
TRIO-202ENST00000344204 ETDCA0A1B0GVM5 59 aa10.32□□□□□ -0.76
TRIO-202ENST00000344204 NOP10Q9NPE3 64 aaKnown RBP10.32□□□□□ -0.76
TRIO-202ENST00000344204 RNF138Q8WVD3 245 aa10.32□□□□□ -0.76
TRIO-202ENST00000344204 TRBV27A0A0K0K1C4 114 aa10.31□□□□□ -0.76
TRIO-202ENST00000344204 HOXB4P17483 251 aaPredicted RBP10.31□□□□□ -0.76
TRIO-202ENST00000344204 IGLV4-3A0A075B6K6 122 aa10.31□□□□□ -0.76
TRIO-202ENST00000344204 LY6HO94772 140 aa10.3□□□□□ -0.76
TRIO-202ENST00000344204 SCXQ7RTU7 201 aa10.3□□□□□ -0.76
TRIO-202ENST00000344204 SOSTDC1Q6X4U4 206 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 1368 ms