RNA–Protein interactions for RNA: ENST00000342784.6

SYDE1-201, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYDE1, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-201ENST00000342784 RNF223E7ERA6 249 aa10.3□□□□□ -0.76
SYDE1-201ENST00000342784 TRACP01848 142 aa10.3□□□□□ -0.76
SYDE1-201ENST00000342784 GPHB5Q86YW7 130 aa10.3□□□□□ -0.76
SYDE1-201ENST00000342784 NPBQ8NG41 125 aa10.3□□□□□ -0.76
SYDE1-201ENST00000342784 LINC01560Q8TB33 94 aa10.3□□□□□ -0.76
SYDE1-201ENST00000342784 MRPL53Q96EL3 112 aaKnown RBP10.3□□□□□ -0.76
SYDE1-201ENST00000342784 OPRPNQ99935 248 aaPredicted RBP10.3□□□□□ -0.76
SYDE1-201ENST00000342784 FAM215AQ9Y5M1 114 aa10.3□□□□□ -0.76
SYDE1-201ENST00000342784 TMEM223A0PJW6 202 aa10.3□□□□□ -0.76
SYDE1-201ENST00000342784 GNRH2O43555 120 aa10.3□□□□□ -0.76
SYDE1-201ENST00000342784 COX7CP15954 63 aa10.3□□□□□ -0.76
SYDE1-201ENST00000342784 EBI3Q14213 229 aa10.3□□□□□ -0.76
SYDE1-201ENST00000342784 IMUPQ9GZP8 106 aa10.3□□□□□ -0.76
SYDE1-201ENST00000342784 HIVEP2P31629 2446 aa10.3□□□□□ -0.76
SYDE1-201ENST00000342784 A0A0J9YXY3 114 aa10.29□□□□□ -0.76
SYDE1-201ENST00000342784 FAM74A4Q5TZK3 123 aa10.29□□□□□ -0.76
SYDE1-201ENST00000342784 FN1P02751 2386 aaKnown RBP10.29□□□□□ -0.76
SYDE1-201ENST00000342784 IGKV3-7A0A075B6H7 116 aa10.29□□□□□ -0.76
SYDE1-201ENST00000342784 A0A087WWL8 130 aa10.29□□□□□ -0.76
SYDE1-201ENST00000342784 LY6LH3BQJ8 138 aa10.29□□□□□ -0.76
SYDE1-201ENST00000342784 CRYGAP11844 174 aa10.29□□□□□ -0.76
SYDE1-201ENST00000342784 ACYP1P07311 99 aa10.28□□□□□ -0.76
SYDE1-201ENST00000342784 EEF1AKMT3Q96AZ1 226 aa10.28□□□□□ -0.76
SYDE1-201ENST00000342784 PFN2P35080 140 aa10.28□□□□□ -0.76
SYDE1-201ENST00000342784 RPL11P62913 178 aaKnown RBP10.28□□□□□ -0.76
SYDE1-201ENST00000342784 LINC01600Q96MT4 127 aa10.28□□□□□ -0.76
SYDE1-201ENST00000342784 ZFAND3Q9H8U3 227 aa10.28□□□□□ -0.76
SYDE1-201ENST00000342784 USP24Q9UPU5 2620 aa10.28□□□□□ -0.76
SYDE1-201ENST00000342784 TRAV12-3A0A0B4J271 114 aa10.27□□□□□ -0.76
SYDE1-201ENST00000342784 A0A0J9YXV3 536 aa10.27□□□□□ -0.76
SYDE1-201ENST00000342784 SPANXDQ9BXN6 97 aa10.27□□□□□ -0.76
SYDE1-201ENST00000342784 SUMO4Q6EEV6 95 aa10.27□□□□□ -0.77
SYDE1-201ENST00000342784 IL17DQ8TAD2 202 aa10.27□□□□□ -0.77
SYDE1-201ENST00000342784 C10orf105Q8TEF2 133 aa10.27□□□□□ -0.77
SYDE1-201ENST00000342784 SPANXCQ9NY87 97 aa10.27□□□□□ -0.77
SYDE1-201ENST00000342784 LENEPQ9Y5L5 61 aa10.27□□□□□ -0.77
SYDE1-201ENST00000342784 LST1O00453 97 aa10.27□□□□□ -0.77
SYDE1-201ENST00000342784 TIMM21Q9BVV7 248 aa10.27□□□□□ -0.77
SYDE1-201ENST00000342784 IGSF10Q6WRI0 2623 aa10.27□□□□□ -0.77
SYDE1-201ENST00000342784 IGHV3OR16-10A0A075B7F0 116 aa10.26□□□□□ -0.77
SYDE1-201ENST00000342784 POLR2KP53803 58 aaKnown RBP10.26□□□□□ -0.77
SYDE1-201ENST00000342784 Q6ZSV7 163 aa10.26□□□□□ -0.77
SYDE1-201ENST00000342784 C9orf139Q6ZV77 190 aa10.26□□□□□ -0.77
SYDE1-201ENST00000342784 LINC00643Q86TS7 51 aa10.26□□□□□ -0.77
SYDE1-201ENST00000342784 A0A0U1RQV1 116 aa10.25□□□□□ -0.77
SYDE1-201ENST00000342784 ZNF580Q9UK33 172 aa10.25□□□□□ -0.77
SYDE1-201ENST00000342784 A0A0G2JNJ9 132 aa10.25□□□□□ -0.77
SYDE1-201ENST00000342784 I3L3M4 83 aa10.25□□□□□ -0.77
SYDE1-201ENST00000342784 DEFB1P60022 68 aa10.25□□□□□ -0.77
SYDE1-201ENST00000342784 ZFAND2AQ8N6M9 145 aa10.25□□□□□ -0.77
SYDE1-201ENST00000342784 C2orf48Q96LS8 159 aa10.25□□□□□ -0.77
SYDE1-201ENST00000342784 Q9UFV3 132 aa10.25□□□□□ -0.77
SYDE1-201ENST00000342784 TRAV13-1A0A0B4J241 112 aa10.25□□□□□ -0.77
SYDE1-201ENST00000342784 NSUN5P1Q3KNT7 163 aa10.25□□□□□ -0.77
SYDE1-201ENST00000342784 C1orf195Q5TG92 126 aa10.25□□□□□ -0.77
SYDE1-201ENST00000342784 IGHV3-30-3P0DP02 117 aa10.24□□□□□ -0.77
SYDE1-201ENST00000342784 TMEM258P61165 79 aa10.24□□□□□ -0.77
SYDE1-201ENST00000342784 ZNF462Q96JM2 2506 aa10.24□□□□□ -0.77
SYDE1-201ENST00000342784 IGHV4OR15-8A0A075B7B6 117 aa10.24□□□□□ -0.77
SYDE1-201ENST00000342784 A0A087WW49 117 aa10.24□□□□□ -0.77
SYDE1-201ENST00000342784 CLPSL1A2RUU4 121 aa10.24□□□□□ -0.77
SYDE1-201ENST00000342784 ATP5G1P05496 136 aa10.24□□□□□ -0.77
SYDE1-201ENST00000342784 KLRB1Q12918 225 aa10.24□□□□□ -0.77
SYDE1-201ENST00000342784 NDUFA12Q9UI09 145 aa10.24□□□□□ -0.77
SYDE1-201ENST00000342784 MED14OSP0DP75 135 aa10.23□□□□□ -0.77
SYDE1-201ENST00000342784 DEFB121Q5J5C9 76 aa10.23□□□□□ -0.77
SYDE1-201ENST00000342784 A0A0J9YX75 114 aa10.23□□□□□ -0.77
SYDE1-201ENST00000342784 RNASE3P12724 160 aaKnown RBP10.23□□□□□ -0.77
SYDE1-201ENST00000342784 IGHV1-69P01742 117 aa10.22□□□□□ -0.77
SYDE1-201ENST00000342784 IGHV7-81A0A0B4J1V7 117 aa10.22□□□□□ -0.77
SYDE1-201ENST00000342784 C20orf173Q96LM9 149 aa10.22□□□□□ -0.77
SYDE1-201ENST00000342784 NBEAL2Q6ZNJ1 2754 aa10.22□□□□□ -0.77
SYDE1-201ENST00000342784 CCL21O00585 134 aa10.22□□□□□ -0.77
SYDE1-201ENST00000342784 WFDC11Q8NEX6 87 aa10.21□□□□□ -0.77
SYDE1-201ENST00000342784 FAM110DQ8TAY7 271 aaPredicted RBP10.21□□□□□ -0.77
SYDE1-201ENST00000342784 VMO1Q7Z5L0 202 aa10.21□□□□□ -0.78
SYDE1-201ENST00000342784 TRBV27A0A0K0K1C4 114 aa10.2□□□□□ -0.78
SYDE1-201ENST00000342784 F6UB75 175 aa10.2□□□□□ -0.78
SYDE1-201ENST00000342784 MIAQ16674 131 aa10.2□□□□□ -0.78
SYDE1-201ENST00000342784 E7EQL1 145 aa10.2□□□□□ -0.78
SYDE1-201ENST00000342784 CD28P10747 220 aa10.2□□□□□ -0.78
SYDE1-201ENST00000342784 ADAMTSL4-AS1Q5T5F5 129 aa10.2□□□□□ -0.78
SYDE1-201ENST00000342784 C9orf85Q96MD7 179 aa10.2□□□□□ -0.78
SYDE1-201ENST00000342784 PRRC2AP48634 2157 aaKnown RBP10.2□□□□□ -0.78
SYDE1-201ENST00000342784 RHOHQ15669 191 aa10.2□□□□□ -0.78
SYDE1-201ENST00000342784 TMEM61Q8N0U2 210 aa10.2□□□□□ -0.78
SYDE1-201ENST00000342784 A0A0U1RRA0 63 aa10.19□□□□□ -0.78
SYDE1-201ENST00000342784 CDSNQ15517 529 aa10.19□□□□□ -0.78
SYDE1-201ENST00000342784 CCDC140Q96MF4 163 aa10.19□□□□□ -0.78
SYDE1-201ENST00000342784 LINC00315P59091 139 aa10.19□□□□□ -0.78
SYDE1-201ENST00000342784 KIF25-AS1Q9Y6Z4 181 aa10.19□□□□□ -0.78
SYDE1-201ENST00000342784 ATP6V0E1O15342 81 aa10.18□□□□□ -0.78
SYDE1-201ENST00000342784 SMCR5Q8TEV8 140 aa10.18□□□□□ -0.78
SYDE1-201ENST00000342784 MXRA5Q9NR99 2828 aa10.18□□□□□ -0.78
SYDE1-201ENST00000342784 G3V318 75 aa10.18□□□□□ -0.78
SYDE1-201ENST00000342784 ATOX1O00244 68 aa10.18□□□□□ -0.78
SYDE1-201ENST00000342784 DAND5Q8N907 189 aa10.18□□□□□ -0.78
SYDE1-201ENST00000342784 CHD6Q8TD26 2715 aa10.18□□□□□ -0.78
SYDE1-201ENST00000342784 C20orf203Q8NBC4 194 aa10.18□□□□□ -0.78
SYDE1-201ENST00000342784 PRORYQ9H606 182 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms