RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 GTSF1Q8WW33 167 aa2.41□□□□□ -2.02
CCDC66-202ENST00000341455 VSIG2Q96IQ7 327 aa2.41□□□□□ -2.02
CCDC66-202ENST00000341455 LINC01587Q99440 93 aa2.41□□□□□ -2.02
CCDC66-202ENST00000341455 MDFICQ9P1T7 246 aa2.41□□□□□ -2.02
CCDC66-202ENST00000341455 HSPG2P98160 4391 aa2.41□□□□□ -2.02
CCDC66-202ENST00000341455 A8MWL6 223 aa2.4□□□□□ -2.02
CCDC66-202ENST00000341455 H7C423 109 aa2.4□□□□□ -2.02
CCDC66-202ENST00000341455 K7EMI3 77 aa2.4□□□□□ -2.02
CCDC66-202ENST00000341455 PRB2P02812 416 aaPredicted RBP2.4□□□□□ -2.02
CCDC66-202ENST00000341455 Q6ZQT7 251 aa2.4□□□□□ -2.02
CCDC66-202ENST00000341455 MTURNQ8N3F0 131 aa2.4□□□□□ -2.02
CCDC66-202ENST00000341455 MRAP2Q96G30 205 aa2.4□□□□□ -2.02
CCDC66-202ENST00000341455 BTF3L4Q96K17 158 aa2.4□□□□□ -2.02
CCDC66-202ENST00000341455 SMIM7Q9BQ49 75 aa2.4□□□□□ -2.02
CCDC66-202ENST00000341455 TMEM191AQ9H0A3 160 aa2.4□□□□□ -2.02
CCDC66-202ENST00000341455 LAMTOR2Q9Y2Q5 125 aa2.4□□□□□ -2.02
CCDC66-202ENST00000341455 MUC4Q99102 2169 aa2.4□□□□□ -2.03
CCDC66-202ENST00000341455 IGKV3-7A0A075B6H7 116 aa2.4□□□□□ -2.03
CCDC66-202ENST00000341455 TRBV24-1A0A075B6N3 115 aa2.4□□□□□ -2.03
CCDC66-202ENST00000341455 PKIAP61925 76 aa2.4□□□□□ -2.03
CCDC66-202ENST00000341455 Q6ZR54 194 aa2.4□□□□□ -2.03
CCDC66-202ENST00000341455 FER1L6-AS1Q8NA97 138 aa2.4□□□□□ -2.03
CCDC66-202ENST00000341455 PPDPFQ9H3Y8 114 aa2.4□□□□□ -2.03
CCDC66-202ENST00000341455 NAT8BQ9UHF3 227 aa2.4□□□□□ -2.03
CCDC66-202ENST00000341455 PRO0255Q9UI72 69 aa2.4□□□□□ -2.03
CCDC66-202ENST00000341455 ZNF727A8MUV8 499 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 EIF3GO75821 320 aaKnown RBP eCLIP2.39□□□□□ -2.03
CCDC66-202ENST00000341455 P01737 135 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 DEFB121Q5J5C9 76 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 COMMD7Q86VX2 200 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 RNF185Q96GF1 192 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 TCAPO15273 167 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 GNRH2O43555 120 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 PPP1R17O96001 155 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 ARMS2P0C7Q2 107 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 TRGC1P0CF51 173 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 DNAH10OSP0CZ25 163 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 FXYD7P58549 80 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 UBE2D3P61077 147 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 DAD1P61803 113 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 UBE2D2P62837 147 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 RHOHQ15669 191 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 TAL2Q16559 108 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 Q6ZTC4 211 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 Q6ZTI0 123 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 FAM19A3Q7Z5A8 133 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 AP1S3Q96PC3 154 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 EIF5A2Q9GZV4 153 aaKnown RBP2.39□□□□□ -2.03
CCDC66-202ENST00000341455 DNAH8Q96JB1 4490 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 A0A096LPF7 62 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 K7EQD1 137 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 M0QY20 66 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 GATCO43716 136 aaKnown RBP2.39□□□□□ -2.03
CCDC66-202ENST00000341455 S100A8P05109 93 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 PRSS3P2Q8NHM4 247 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 DPH3P1Q9H4G8 78 aa2.39□□□□□ -2.03
CCDC66-202ENST00000341455 NOP10Q9NPE3 64 aaKnown RBP2.39□□□□□ -2.03
CCDC66-202ENST00000341455 DEFB131BA0A096LNP1 70 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 PPBPP02775 128 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 P0DMU3 169 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 FAM231AP0DMU4 169 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 FAM231CP0DMU5 169 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 NANOS2P60321 138 aaKnown RBP2.38□□□□□ -2.03
CCDC66-202ENST00000341455 C20orf78Q9BR46 151 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 TIMM21Q9BVV7 248 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 FAT3Q8TDW7 4589 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 TENM3Q9P273 2699 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 TRBV27A0A0K0K1C4 114 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 A0A1B0GUT8 65 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 IGKV3-20P01619 116 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 MT-ND4LP03901 98 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 HNRNPA3P51991 378 aaKnown RBP2.38□□□□□ -2.03
CCDC66-202ENST00000341455 LYZL1Q6UWQ5 148 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 DAZ4Q86SG3 579 aaKnown RBP2.38□□□□□ -2.03
CCDC66-202ENST00000341455 NRACQ8N912 160 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 NUP35Q8NFH5 326 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 OR10AG1Q8NH19 301 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 ZNRF2Q8NHG8 242 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 GNB1LQ9BYB4 327 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 DAZ3Q9NR90 486 aaKnown RBP2.38□□□□□ -2.03
CCDC66-202ENST00000341455 ICOSQ9Y6W8 199 aa2.38□□□□□ -2.03
CCDC66-202ENST00000341455 SORL1Q92673 2214 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 NOTCH3Q9UM47 2321 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 IGLV2-18A0A075B6J9 118 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 LOC100131303A0A0U1RQF7 123 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 H7C1H1 209 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 POLR2KP53803 58 aaKnown RBP2.37□□□□□ -2.03
CCDC66-202ENST00000341455 IQCJQ1A5X6 159 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 ZNF876PQ49A33 203 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 LINC01556Q5JQF7 62 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 LINC00242Q5T6M2 205 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 LELP1Q5T871 98 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 MRPL52Q86TS9 123 aaKnown RBP2.37□□□□□ -2.03
CCDC66-202ENST00000341455 OR2D3Q8NGH3 330 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 RNASE7Q9H1E1 156 aaKnown RBP2.37□□□□□ -2.03
CCDC66-202ENST00000341455 Q9UF83 564 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 A0A1B0GUV1 79 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 LINC01549A6NIU2 74 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 H3BVH4 76 aa2.37□□□□□ -2.03
CCDC66-202ENST00000341455 MT-ND6P03923 174 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms