RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 C11orf21Q9P2W6 132 aa14.49□□□□□ -0.09
CDK13-202ENST00000340829 RS1O15537 224 aa14.48□□□□□ -0.09
CDK13-202ENST00000340829 LINC01620Q4KN68 170 aa14.48□□□□□ -0.09
CDK13-202ENST00000340829 C1orf43Q9BWL3 253 aa14.48□□□□□ -0.09
CDK13-202ENST00000340829 U3KQK5 164 aa14.48□□□□□ -0.09
CDK13-202ENST00000340829 NEXN-AS1Q8NBZ9 246 aa14.48□□□□□ -0.09
CDK13-202ENST00000340829 TMEM126AQ9H061 195 aa14.48□□□□□ -0.09
CDK13-202ENST00000340829 TNRC6BQ9UPQ9 1833 aaKnown RBP14.48□□□□□ -0.09
CDK13-202ENST00000340829 PRR9Q5T870 116 aa14.47□□□□□ -0.09
CDK13-202ENST00000340829 RMI2Q96E14 147 aa14.47□□□□□ -0.09
CDK13-202ENST00000340829 C9orf153Q5TBE3 101 aa14.47□□□□□ -0.09
CDK13-202ENST00000340829 DSCR8Q96T75 97 aa14.47□□□□□ -0.09
CDK13-202ENST00000340829 IGKV2D-26A0A0A0MRZ7 120 aa14.46□□□□□ -0.09
CDK13-202ENST00000340829 TRBV10-1A0A0K0K1A3 114 aa14.46□□□□□ -0.09
CDK13-202ENST00000340829 PSMB8P28062 276 aa14.46□□□□□ -0.09
CDK13-202ENST00000340829 RPL32P62910 135 aaKnown RBP14.46□□□□□ -0.09
CDK13-202ENST00000340829 TLN2Q9Y4G6 2542 aa14.46□□□□□ -0.1
CDK13-202ENST00000340829 TEN1Q86WV5 123 aa14.46□□□□□ -0.1
CDK13-202ENST00000340829 CAMK2N2Q96S95 79 aa14.46□□□□□ -0.1
CDK13-202ENST00000340829 Q6ZSV7 163 aa14.45□□□□□ -0.1
CDK13-202ENST00000340829 ORMDL1Q9P0S3 153 aa14.45□□□□□ -0.1
CDK13-202ENST00000340829 EXPH5Q8NEV8 1989 aa14.44□□□□□ -0.1
CDK13-202ENST00000340829 IGHV4-4A0A075B6R2 117 aa14.44□□□□□ -0.1
CDK13-202ENST00000340829 CRYBA4P53673 196 aa14.44□□□□□ -0.1
CDK13-202ENST00000340829 ZMAT4Q9H898 229 aa14.44□□□□□ -0.1
CDK13-202ENST00000340829 CLEC2BQ92478 149 aa14.44□□□□□ -0.1
CDK13-202ENST00000340829 NFE4Q86UQ8 179 aa14.43□□□□□ -0.1
CDK13-202ENST00000340829 NDUFA11Q86Y39 141 aa14.43□□□□□ -0.1
CDK13-202ENST00000340829 GAS8-AS1O95177 125 aa14.43□□□□□ -0.1
CDK13-202ENST00000340829 ZNF843Q8N446 348 aa14.43□□□□□ -0.1
CDK13-202ENST00000340829 MIR7-3HGQ8N6C7 128 aa14.43□□□□□ -0.1
CDK13-202ENST00000340829 LINC00467Q9BRT7 94 aa14.43□□□□□ -0.1
CDK13-202ENST00000340829 M0QY20 66 aa14.42□□□□□ -0.1
CDK13-202ENST00000340829 PRO0255Q9UI72 69 aa14.42□□□□□ -0.1
CDK13-202ENST00000340829 USP9XQ93008 2570 aaPredicted RBP14.42□□□□□ -0.1
CDK13-202ENST00000340829 PROK1P58294 105 aa14.42□□□□□ -0.1
CDK13-202ENST00000340829 MAPKAPK5-AS1Q8N8E1 139 aa14.42□□□□□ -0.1
CDK13-202ENST00000340829 PTH2Q96A98 100 aa14.41□□□□□ -0.1
CDK13-202ENST00000340829 PRRC2AP48634 2157 aaKnown RBP14.41□□□□□ -0.1
CDK13-202ENST00000340829 RNASE3P12724 160 aaKnown RBP14.41□□□□□ -0.1
CDK13-202ENST00000340829 ZNF702PQ9H963 129 aa14.41□□□□□ -0.1
CDK13-202ENST00000340829 LINC00310P59036 64 aa14.41□□□□□ -0.1
CDK13-202ENST00000340829 KLK12Q9UKR0 248 aa14.41□□□□□ -0.1
CDK13-202ENST00000340829 A0A0J9YXY3 114 aa14.4□□□□□ -0.1
CDK13-202ENST00000340829 H0YGX0 51 aa14.4□□□□□ -0.1
CDK13-202ENST00000340829 CHD8Q9HCK8 2581 aa14.4□□□□□ -0.1
CDK13-202ENST00000340829 A0A1W2PPR1 153 aa14.4□□□□□ -0.1
CDK13-202ENST00000340829 AVPP01185 164 aa14.4□□□□□ -0.1
CDK13-202ENST00000340829 PCNTO95613 3336 aa14.39□□□□□ -0.11
CDK13-202ENST00000340829 IGLV4-3A0A075B6K6 122 aa14.39□□□□□ -0.11
CDK13-202ENST00000340829 C18orf65Q6ZTR6 163 aa14.39□□□□□ -0.11
CDK13-202ENST00000340829 NRACQ8N912 160 aa14.39□□□□□ -0.11
CDK13-202ENST00000340829 RPL18AQ02543 176 aaKnown RBP14.39□□□□□ -0.11
CDK13-202ENST00000340829 FOXI1Q12951 378 aa14.39□□□□□ -0.11
CDK13-202ENST00000340829 INSL3P51460 131 aa14.38□□□□□ -0.11
CDK13-202ENST00000340829 DEFB105AQ8NG35 78 aa14.38□□□□□ -0.11
CDK13-202ENST00000340829 CDKN2A-AS1Q9UH64 79 aa14.38□□□□□ -0.11
CDK13-202ENST00000340829 IGLV1-40P01703 118 aa14.38□□□□□ -0.11
CDK13-202ENST00000340829 PSMG3-AS1Q96PY0 264 aa14.38□□□□□ -0.11
CDK13-202ENST00000340829 ZNF22P17026 224 aaPredicted RBP14.38□□□□□ -0.11
CDK13-202ENST00000340829 CFAP126Q5VTH2 177 aa14.38□□□□□ -0.11
CDK13-202ENST00000340829 MRPS12O15235 138 aaKnown RBP14.38□□□□□ -0.11
CDK13-202ENST00000340829 SPTBN4Q9H254 2564 aa14.37□□□□□ -0.11
CDK13-202ENST00000340829 MIAQ16674 131 aa14.37□□□□□ -0.11
CDK13-202ENST00000340829 USP9YO00507 2555 aaPredicted RBP14.37□□□□□ -0.11
CDK13-202ENST00000340829 SPAG11BQ08648 103 aa14.37□□□□□ -0.11
CDK13-202ENST00000340829 NCR3O14931 201 aa14.36□□□□□ -0.11
CDK13-202ENST00000340829 SETD2Q9BYW2 2564 aaPredicted RBP14.36□□□□□ -0.11
CDK13-202ENST00000340829 LECT2O14960 151 aa14.35□□□□□ -0.11
CDK13-202ENST00000340829 TCL1BO95988 128 aa14.35□□□□□ -0.11
CDK13-202ENST00000340829 PRM2P04554 102 aa14.35□□□□□ -0.11
CDK13-202ENST00000340829 TM2D2Q9BX73 214 aa14.35□□□□□ -0.11
CDK13-202ENST00000340829 TRBV10-2A0A0K0K1G8 114 aa14.35□□□□□ -0.11
CDK13-202ENST00000340829 KLLNB2CW77 178 aa14.35□□□□□ -0.11
CDK13-202ENST00000340829 FAM222AQ5U5X8 452 aa14.34□□□□□ -0.11
CDK13-202ENST00000340829 TRBV27A0A0K0K1C4 114 aa14.34□□□□□ -0.11
CDK13-202ENST00000340829 CCL18P55774 89 aa14.34□□□□□ -0.11
CDK13-202ENST00000340829 TMEM223A0PJW6 202 aa14.33□□□□□ -0.11
CDK13-202ENST00000340829 EDN2P20800 178 aa14.33□□□□□ -0.11
CDK13-202ENST00000340829 DCANP1Q8TF63 244 aa14.33□□□□□ -0.11
CDK13-202ENST00000340829 NDUFA1O15239 70 aa14.33□□□□□ -0.12
CDK13-202ENST00000340829 RBMY1FQ15415 496 aaKnown RBP14.33□□□□□ -0.12
CDK13-202ENST00000340829 F8W735 103 aaPredicted RBP14.33□□□□□ -0.12
CDK13-202ENST00000340829 TRAV26-1A0A087WT03 109 aa14.32□□□□□ -0.12
CDK13-202ENST00000340829 INAFM1C9JVW0 142 aa14.32□□□□□ -0.12
CDK13-202ENST00000340829 UBE2BP63146 152 aa14.32□□□□□ -0.12
CDK13-202ENST00000340829 ABCA12Q86UK0 2595 aa14.32□□□□□ -0.12
CDK13-202ENST00000340829 G3V4G9 280 aa14.32□□□□□ -0.12
CDK13-202ENST00000340829 ACYP1P07311 99 aa14.32□□□□□ -0.12
CDK13-202ENST00000340829 URB1-AS1Q96HZ7 61 aa14.32□□□□□ -0.12
CDK13-202ENST00000340829 C2orf91Q6ZV80 131 aa14.31□□□□□ -0.12
CDK13-202ENST00000340829 CXCL5P42830 114 aa14.31□□□□□ -0.12
CDK13-202ENST00000340829 LINC00482Q8N8I6 264 aa14.3□□□□□ -0.12
CDK13-202ENST00000340829 LINC00269Q8N2A0 174 aa14.3□□□□□ -0.12
CDK13-202ENST00000340829 TRBV6-5A0A0K0K1A5 114 aa14.3□□□□□ -0.12
CDK13-202ENST00000340829 H3BT86 120 aa14.29□□□□□ -0.12
CDK13-202ENST00000340829 CNFNQ9BYD5 112 aa14.29□□□□□ -0.12
CDK13-202ENST00000340829 WFDC10AQ9H1F0 79 aa14.29□□□□□ -0.12
CDK13-202ENST00000340829 ETDCA0A1B0GVM5 59 aa14.29□□□□□ -0.12
CDK13-202ENST00000340829 A0A0B4J2C4 111 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms