RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 MUC22E2RYF6 1773 aaPredicted RBP6.69□□□□□ -1.34
RTN3-202ENST00000339997 CRIP3Q6Q6R5 217 aa6.68□□□□□ -1.34
RTN3-202ENST00000339997 GPHB5Q86YW7 130 aa6.68□□□□□ -1.34
RTN3-202ENST00000339997 LINC01356Q8N9X3 169 aa6.68□□□□□ -1.34
RTN3-202ENST00000339997 SPTSSBQ8NFR3 76 aa6.68□□□□□ -1.34
RTN3-202ENST00000339997 TEX22C9J3V5 150 aa6.68□□□□□ -1.34
RTN3-202ENST00000339997 CCL18P55774 89 aa6.68□□□□□ -1.34
RTN3-202ENST00000339997 COX7B2Q8TF08 81 aa6.68□□□□□ -1.34
RTN3-202ENST00000339997 CELSR1Q9NYQ6 3014 aa6.68□□□□□ -1.34
RTN3-202ENST00000339997 IGLV11-55A0A075B6I3 123 aa6.68□□□□□ -1.34
RTN3-202ENST00000339997 IGKV1D-37A0A075B6S9 117 aa6.68□□□□□ -1.34
RTN3-202ENST00000339997 CENPVL3A0A0U1RRI6 287 aa6.68□□□□□ -1.34
RTN3-202ENST00000339997 HERV-K104P63124 156 aa6.68□□□□□ -1.34
RTN3-202ENST00000339997 NREPQ16612 68 aa6.68□□□□□ -1.34
RTN3-202ENST00000339997 C22orf34Q6ZV56 151 aa6.68□□□□□ -1.34
RTN3-202ENST00000339997 MAPKAPK5-AS1Q8N8E1 139 aa6.68□□□□□ -1.34
RTN3-202ENST00000339997 Q96MF0 132 aa6.68□□□□□ -1.34
RTN3-202ENST00000339997 USP24Q9UPU5 2620 aa6.68□□□□□ -1.34
RTN3-202ENST00000339997 IGHV4-61A0A0C4DH41 118 aa6.67□□□□□ -1.34
RTN3-202ENST00000339997 UBE2AP49459 152 aa6.67□□□□□ -1.34
RTN3-202ENST00000339997 KAAG1Q9UBP8 84 aa6.67□□□□□ -1.34
RTN3-202ENST00000339997 TIRAPP58753 221 aa6.67□□□□□ -1.34
RTN3-202ENST00000339997 NPBQ8NG41 125 aa6.67□□□□□ -1.34
RTN3-202ENST00000339997 INSL3P51460 131 aa6.67□□□□□ -1.34
RTN3-202ENST00000339997 FANCD2OSQ96PS1 177 aa6.67□□□□□ -1.34
RTN3-202ENST00000339997 C19orf71A6NCJ1 209 aa6.66□□□□□ -1.34
RTN3-202ENST00000339997 LGALS9O00182 355 aa6.66□□□□□ -1.34
RTN3-202ENST00000339997 SP5Q6BEB4 398 aaPredicted RBP6.66□□□□□ -1.34
RTN3-202ENST00000339997 BRK1Q8WUW1 75 aa6.66□□□□□ -1.34
RTN3-202ENST00000339997 A0A1W2PNU3 283 aaPredicted RBP6.66□□□□□ -1.34
RTN3-202ENST00000339997 IGKV4-1P06312 121 aa6.66□□□□□ -1.34
RTN3-202ENST00000339997 LTBP2Q14767 1821 aa6.66□□□□□ -1.34
RTN3-202ENST00000339997 ADGRG4Q8IZF6 3080 aa6.66□□□□□ -1.34
RTN3-202ENST00000339997 ZFP36P26651 326 aaKnown RBP6.66□□□□□ -1.34
RTN3-202ENST00000339997 SEM1Q6ZVN7 128 aa6.66□□□□□ -1.34
RTN3-202ENST00000339997 Q8N9W7 124 aa6.66□□□□□ -1.34
RTN3-202ENST00000339997 A8MZ25 164 aa6.66□□□□□ -1.34
RTN3-202ENST00000339997 K7ENP7 123 aa6.66□□□□□ -1.34
RTN3-202ENST00000339997 GAS8-AS1O95177 125 aa6.66□□□□□ -1.34
RTN3-202ENST00000339997 E9PLD3 99 aa6.65□□□□□ -1.34
RTN3-202ENST00000339997 Q6ZUT4 128 aa6.65□□□□□ -1.34
RTN3-202ENST00000339997 KIR2DL5BQ8NHK3 375 aa6.65□□□□□ -1.34
RTN3-202ENST00000339997 PRR15LQ9BU68 103 aa6.65□□□□□ -1.34
RTN3-202ENST00000339997 ORMDL1Q9P0S3 153 aa6.65□□□□□ -1.34
RTN3-202ENST00000339997 HCFC1P51610 2035 aa6.65□□□□□ -1.34
RTN3-202ENST00000339997 IGHG2P01859 326 aa6.65□□□□□ -1.34
RTN3-202ENST00000339997 NDUFA11Q86Y39 141 aa6.65□□□□□ -1.34
RTN3-202ENST00000339997 SLC25A29Q8N8R3 303 aa6.65□□□□□ -1.34
RTN3-202ENST00000339997 EML5Q05BV3 1969 aa6.65□□□□□ -1.34
RTN3-202ENST00000339997 CRYGBP07316 175 aa6.65□□□□□ -1.35
RTN3-202ENST00000339997 YPEL4Q96NS1 127 aa6.65□□□□□ -1.35
RTN3-202ENST00000339997 PLXNA2O75051 1894 aa6.65□□□□□ -1.35
RTN3-202ENST00000339997 TRAV23DV6A0A075B6W5 121 aa6.65□□□□□ -1.35
RTN3-202ENST00000339997 MIR7-3HGQ8N6C7 128 aa6.65□□□□□ -1.35
RTN3-202ENST00000339997 MBD6Q96DN6 1003 aa6.65□□□□□ -1.35
RTN3-202ENST00000339997 C2orf16Q68DN1 1984 aa6.64□□□□□ -1.35
RTN3-202ENST00000339997 A0A1B0GXF2 115 aa6.64□□□□□ -1.35
RTN3-202ENST00000339997 IGHV3-30-3P0DP02 117 aa6.64□□□□□ -1.35
RTN3-202ENST00000339997 Q8N7P7 452 aa6.64□□□□□ -1.35
RTN3-202ENST00000339997 VSIG2Q96IQ7 327 aa6.64□□□□□ -1.35
RTN3-202ENST00000339997 NCR3O14931 201 aa6.64□□□□□ -1.35
RTN3-202ENST00000339997 IGHV3-30P01768 117 aa6.64□□□□□ -1.35
RTN3-202ENST00000339997 IGHV3-33P01772 117 aa6.64□□□□□ -1.35
RTN3-202ENST00000339997 IGHV3-30-5P0DP03 117 aa6.64□□□□□ -1.35
RTN3-202ENST00000339997 TM2D2Q9BX73 214 aa6.64□□□□□ -1.35
RTN3-202ENST00000339997 IGHV4-30-2A0A087WSY4 118 aa6.64□□□□□ -1.35
RTN3-202ENST00000339997 USP17L23D6RBM5 183 aa6.64□□□□□ -1.35
RTN3-202ENST00000339997 IGLV1-47P01700 117 aa6.64□□□□□ -1.35
RTN3-202ENST00000339997 SLPIP03973 132 aa6.64□□□□□ -1.35
RTN3-202ENST00000339997 ACYP1P07311 99 aa6.64□□□□□ -1.35
RTN3-202ENST00000339997 GYPEP15421 78 aa6.64□□□□□ -1.35
RTN3-202ENST00000339997 KRTAP27-1Q3LI81 207 aa6.64□□□□□ -1.35
RTN3-202ENST00000339997 SDIM1Q6ZPB5 146 aa6.64□□□□□ -1.35
RTN3-202ENST00000339997 H0Y9J4 135 aa6.63□□□□□ -1.35
RTN3-202ENST00000339997 PRM2P04554 102 aa6.63□□□□□ -1.35
RTN3-202ENST00000339997 CTRLP40313 264 aa6.63□□□□□ -1.35
RTN3-202ENST00000339997 RHOHQ15669 191 aa6.63□□□□□ -1.35
RTN3-202ENST00000339997 C3orf22Q8N5N4 141 aa6.63□□□□□ -1.35
RTN3-202ENST00000339997 CAMK2N2Q96S95 79 aa6.63□□□□□ -1.35
RTN3-202ENST00000339997 CLUHP3Q96NS8 147 aa6.63□□□□□ -1.35
RTN3-202ENST00000339997 CRIP1P50238 77 aa6.63□□□□□ -1.35
RTN3-202ENST00000339997 Q6ZSR3 168 aa6.63□□□□□ -1.35
RTN3-202ENST00000339997 TNRC6BQ9UPQ9 1833 aaKnown RBP6.63□□□□□ -1.35
RTN3-202ENST00000339997 NCKAP5O14513 1909 aa6.63□□□□□ -1.35
RTN3-202ENST00000339997 SCXQ7RTU7 201 aa6.62□□□□□ -1.35
RTN3-202ENST00000339997 RNF138Q8WVD3 245 aa6.62□□□□□ -1.35
RTN3-202ENST00000339997 HIGD1BQ9P298 99 aa6.62□□□□□ -1.35
RTN3-202ENST00000339997 P0C879 139 aa6.62□□□□□ -1.35
RTN3-202ENST00000339997 IGFL3Q6UXB1 125 aa6.62□□□□□ -1.35
RTN3-202ENST00000339997 TMEM61Q8N0U2 210 aa6.62□□□□□ -1.35
RTN3-202ENST00000339997 TOMM6Q96B49 74 aa6.62□□□□□ -1.35
RTN3-202ENST00000339997 RPL18AQ02543 176 aaKnown RBP6.62□□□□□ -1.35
RTN3-202ENST00000339997 IGHV4OR15-8A0A075B7B6 117 aa6.62□□□□□ -1.35
RTN3-202ENST00000339997 A0A087WW49 117 aa6.62□□□□□ -1.35
RTN3-202ENST00000339997 SPANXB1Q9NS25 103 aaPredicted RBP6.62□□□□□ -1.35
RTN3-202ENST00000339997 TRBV10-2A0A0K0K1G8 114 aa6.61□□□□□ -1.35
RTN3-202ENST00000339997 SERP1Q9Y6X1 66 aa6.61□□□□□ -1.35
RTN3-202ENST00000339997 ATRQ13535 2644 aa6.61□□□□□ -1.35
RTN3-202ENST00000339997 ZZEF1O43149 2961 aa6.61□□□□□ -1.35
RTN3-202ENST00000339997 WI2-2373I1.2A0A1W2PRP0 233 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms