RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 APOC3P02656 99 aa8.65□□□□□ -1.02
SRSF3-201ENST00000339436 PKIAP61925 76 aa8.65□□□□□ -1.02
SRSF3-201ENST00000339436 MPV17L2Q567V2 206 aa8.65□□□□□ -1.02
SRSF3-201ENST00000339436 TMEM243Q9BU79 118 aa8.65□□□□□ -1.02
SRSF3-201ENST00000339436 DYNC1H1Q14204 4646 aaKnown RBP8.65□□□□□ -1.02
SRSF3-201ENST00000339436 BIRC6Q9NR09 4857 aa8.65□□□□□ -1.03
SRSF3-201ENST00000339436 NFE4Q86UQ8 179 aa8.64□□□□□ -1.03
SRSF3-201ENST00000339436 SVBPQ8N300 66 aa8.64□□□□□ -1.03
SRSF3-201ENST00000339436 DEFB104AQ8WTQ1 72 aa8.64□□□□□ -1.03
SRSF3-201ENST00000339436 TRBV27A0A0K0K1C4 114 aa8.64□□□□□ -1.03
SRSF3-201ENST00000339436 D6R8Y8 96 aa8.64□□□□□ -1.03
SRSF3-201ENST00000339436 TMEM262E9PQX1 116 aa8.64□□□□□ -1.03
SRSF3-201ENST00000339436 CKS2P33552 79 aa8.64□□□□□ -1.03
SRSF3-201ENST00000339436 AMTP48728 403 aa8.64□□□□□ -1.03
SRSF3-201ENST00000339436 POLR2KP53803 58 aaKnown RBP8.64□□□□□ -1.03
SRSF3-201ENST00000339436 SUMO2P61956 95 aaKnown RBP8.64□□□□□ -1.03
SRSF3-201ENST00000339436 TNP2Q05952 138 aa8.64□□□□□ -1.03
SRSF3-201ENST00000339436 RPS10P5Q9NQ39 176 aa8.64□□□□□ -1.03
SRSF3-201ENST00000339436 TRBV24-1A0A075B6N3 115 aa8.63□□□□□ -1.03
SRSF3-201ENST00000339436 I3L3M4 83 aa8.63□□□□□ -1.03
SRSF3-201ENST00000339436 SNAPINO95295 136 aa8.63□□□□□ -1.03
SRSF3-201ENST00000339436 APCSP02743 223 aa8.63□□□□□ -1.03
SRSF3-201ENST00000339436 PPBPP02775 128 aa8.63□□□□□ -1.03
SRSF3-201ENST00000339436 S100PP25815 95 aa8.63□□□□□ -1.03
SRSF3-201ENST00000339436 GAGE6Q13070 117 aa8.63□□□□□ -1.03
SRSF3-201ENST00000339436 Q9HAA7 133 aa8.63□□□□□ -1.03
SRSF3-201ENST00000339436 DNAH5Q8TE73 4624 aa8.63□□□□□ -1.03
SRSF3-201ENST00000339436 A0A1B0GVY2 172 aa8.62□□□□□ -1.03
SRSF3-201ENST00000339436 TSHBP01222 138 aa8.62□□□□□ -1.03
SRSF3-201ENST00000339436 PMCHP20382 165 aa8.62□□□□□ -1.03
SRSF3-201ENST00000339436 ATRAIDQ6UW56 229 aa8.62□□□□□ -1.03
SRSF3-201ENST00000339436 ORMDL3Q8N138 153 aa8.62□□□□□ -1.03
SRSF3-201ENST00000339436 Q8N976 141 aa8.62□□□□□ -1.03
SRSF3-201ENST00000339436 KLK12Q9UKR0 248 aa8.62□□□□□ -1.03
SRSF3-201ENST00000339436 TNFRSF6BO95407 300 aa8.61□□□□□ -1.03
SRSF3-201ENST00000339436 NPYP01303 97 aa8.61□□□□□ -1.03
SRSF3-201ENST00000339436 RBX1P62877 108 aa8.61□□□□□ -1.03
SRSF3-201ENST00000339436 ELOBQ15370 118 aa8.61□□□□□ -1.03
SRSF3-201ENST00000339436 SLC7A5P1Q8MH63 180 aa8.61□□□□□ -1.03
SRSF3-201ENST00000339436 C20orf78Q9BR46 151 aa8.61□□□□□ -1.03
SRSF3-201ENST00000339436 TRAV8-3A0A0A6YYJ7 113 aa8.6□□□□□ -1.03
SRSF3-201ENST00000339436 PHOX2AO14813 284 aa8.6□□□□□ -1.03
SRSF3-201ENST00000339436 UBE2L6O14933 153 aa8.6□□□□□ -1.03
SRSF3-201ENST00000339436 RPL32P62910 135 aaKnown RBP8.6□□□□□ -1.03
SRSF3-201ENST00000339436 TMEM136Q6ZRR5 245 aa8.6□□□□□ -1.03
SRSF3-201ENST00000339436 VCYO14598 125 aa8.59□□□□□ -1.03
SRSF3-201ENST00000339436 ANGP03950 147 aaKnown RBP8.59□□□□□ -1.03
SRSF3-201ENST00000339436 UBE2WQ96B02 151 aa8.59□□□□□ -1.03
SRSF3-201ENST00000339436 SMIM2Q9BVW6 85 aa8.59□□□□□ -1.03
SRSF3-201ENST00000339436 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.59□□□□□ -1.03
SRSF3-201ENST00000339436 A0A1B0GUV1 79 aa8.59□□□□□ -1.03
SRSF3-201ENST00000339436 IGKV2-29A2NJV5 120 aaPredicted RBP8.59□□□□□ -1.03
SRSF3-201ENST00000339436 CRPP02741 224 aa8.59□□□□□ -1.03
SRSF3-201ENST00000339436 ESDP10768 282 aa8.59□□□□□ -1.03
SRSF3-201ENST00000339436 C20orf203Q8NBC4 194 aa8.59□□□□□ -1.03
SRSF3-201ENST00000339436 PRELID3AQ96N28 172 aa8.59□□□□□ -1.03
SRSF3-201ENST00000339436 KIR2DL4Q99706 377 aa8.59□□□□□ -1.03
SRSF3-201ENST00000339436 LAMTOR2Q9Y2Q5 125 aa8.59□□□□□ -1.03
SRSF3-201ENST00000339436 IGLV4-60A0A075B6I1 120 aa8.58□□□□□ -1.04
SRSF3-201ENST00000339436 H7C423 109 aa8.58□□□□□ -1.04
SRSF3-201ENST00000339436 HLA-DQA1P01909 254 aa8.58□□□□□ -1.04
SRSF3-201ENST00000339436 Q0VG73 95 aa8.58□□□□□ -1.04
SRSF3-201ENST00000339436 PRR34Q9NV39 138 aa8.58□□□□□ -1.04
SRSF3-201ENST00000339436 LRP1BQ9NZR2 4599 aa8.58□□□□□ -1.04
SRSF3-201ENST00000339436 PSCAO43653 123 aa8.57□□□□□ -1.04
SRSF3-201ENST00000339436 FCER1GP30273 86 aa8.57□□□□□ -1.04
SRSF3-201ENST00000339436 CLPSL2Q6UWE3 100 aa8.57□□□□□ -1.04
SRSF3-201ENST00000339436 ENHOQ6UWT2 76 aa8.57□□□□□ -1.04
SRSF3-201ENST00000339436 RMI2Q96E14 147 aa8.57□□□□□ -1.04
SRSF3-201ENST00000339436 TM2D2Q9BX73 214 aa8.57□□□□□ -1.04
SRSF3-201ENST00000339436 FGF6P10767 208 aa8.56□□□□□ -1.04
SRSF3-201ENST00000339436 COX19Q49B96 90 aa8.56□□□□□ -1.04
SRSF3-201ENST00000339436 LINC00269Q8N2A0 174 aa8.56□□□□□ -1.04
SRSF3-201ENST00000339436 GNB1LQ9BYB4 327 aa8.56□□□□□ -1.04
SRSF3-201ENST00000339436 A0A087WTM6 91 aa8.55□□□□□ -1.04
SRSF3-201ENST00000339436 TGIF2-C20orf24A0A0A6YYL0 155 aa8.55□□□□□ -1.04
SRSF3-201ENST00000339436 TCAPO15273 167 aa8.55□□□□□ -1.04
SRSF3-201ENST00000339436 MT-ND6P03923 174 aa8.55□□□□□ -1.04
SRSF3-201ENST00000339436 ZNF25P17030 456 aaPredicted RBP8.55□□□□□ -1.04
SRSF3-201ENST00000339436 MIAQ16674 131 aa8.55□□□□□ -1.04
SRSF3-201ENST00000339436 AMMECR1LQ6DCA0 310 aa8.55□□□□□ -1.04
SRSF3-201ENST00000339436 COX11Q9Y6N1 276 aa8.55□□□□□ -1.04
SRSF3-201ENST00000339436 IGKV2D-24A0A075B6R9 120 aa8.54□□□□□ -1.04
SRSF3-201ENST00000339436 PRSS47A8MTI9 375 aa8.54□□□□□ -1.04
SRSF3-201ENST00000339436 REG3AQ06141 175 aa8.54□□□□□ -1.04
SRSF3-201ENST00000339436 RNASEKQ6P5S7 137 aaKnown RBP8.54□□□□□ -1.04
SRSF3-201ENST00000339436 C1orf43Q9BWL3 253 aa8.54□□□□□ -1.04
SRSF3-201ENST00000339436 MAP1LC3AQ9H492 121 aa8.54□□□□□ -1.04
SRSF3-201ENST00000339436 LRCOL1A6NCL2 159 aa8.54□□□□□ -1.04
SRSF3-201ENST00000339436 KIAA1644Q3SXP7 199 aa8.54□□□□□ -1.04
SRSF3-201ENST00000339436 MRPL52Q86TS9 123 aaKnown RBP8.54□□□□□ -1.04
SRSF3-201ENST00000339436 MAPKAPK5-AS1Q8N8E1 139 aa8.53□□□□□ -1.04
SRSF3-201ENST00000339436 YPEL4Q96NS1 127 aa8.53□□□□□ -1.04
SRSF3-201ENST00000339436 LOC389332A0A1B0GUA5 103 aa8.52□□□□□ -1.05
SRSF3-201ENST00000339436 EREGO14944 169 aa8.52□□□□□ -1.05
SRSF3-201ENST00000339436 KRTAP10-2P60368 255 aa8.52□□□□□ -1.05
SRSF3-201ENST00000339436 SPATA12Q7Z6I5 190 aa8.52□□□□□ -1.05
SRSF3-201ENST00000339436 OR5A1Q8NGJ0 315 aa8.52□□□□□ -1.05
SRSF3-201ENST00000339436 MRPL18Q9H0U6 180 aaKnown RBP8.52□□□□□ -1.05
SRSF3-201ENST00000339436 RAB5AP20339 215 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms