RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 DYNLRB2Q8TF09 96 aa11.92□□□□□ -0.5
LITAF-201ENST00000339430 PEMTQ9UBM1 199 aa11.92□□□□□ -0.5
LITAF-201ENST00000339430 RHOHQ15669 191 aa11.91□□□□□ -0.5
LITAF-201ENST00000339430 C20orf203Q8NBC4 194 aa11.9□□□□□ -0.5
LITAF-201ENST00000339430 MAP6D1Q9H9H5 199 aa11.9□□□□□ -0.5
LITAF-201ENST00000339430 Q9UF83 564 aa11.9□□□□□ -0.5
LITAF-201ENST00000339430 TSSC4Q9Y5U2 329 aaPredicted RBP11.9□□□□□ -0.5
LITAF-201ENST00000339430 IGHV3-64A0A075B6Q5 118 aa11.89□□□□□ -0.51
LITAF-201ENST00000339430 RRN3P1Q2M238 152 aa11.89□□□□□ -0.51
LITAF-201ENST00000339430 RAX2Q96IS3 184 aa11.89□□□□□ -0.51
LITAF-201ENST00000339430 H3BMG7 143 aa11.88□□□□□ -0.51
LITAF-201ENST00000339430 MTURNQ8N3F0 131 aa11.88□□□□□ -0.51
LITAF-201ENST00000339430 SPAG8Q99932 426 aaPredicted RBP11.88□□□□□ -0.51
LITAF-201ENST00000339430 A0A0J9YY99 117 aa11.87□□□□□ -0.51
LITAF-201ENST00000339430 A0A1B0GWB2 263 aa11.87□□□□□ -0.51
LITAF-201ENST00000339430 KRTAP10-3P60369 221 aa11.87□□□□□ -0.51
LITAF-201ENST00000339430 Q6ZSN1 163 aa11.87□□□□□ -0.51
LITAF-201ENST00000339430 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.87□□□□□ -0.51
LITAF-201ENST00000339430 LINC01587Q99440 93 aa11.87□□□□□ -0.51
LITAF-201ENST00000339430 RPL24P83731 157 aaKnown RBP11.87□□□□□ -0.51
LITAF-201ENST00000339430 DEFB114Q30KQ6 69 aa11.87□□□□□ -0.51
LITAF-201ENST00000339430 PGPEP1Q9NXJ5 209 aa11.87□□□□□ -0.51
LITAF-201ENST00000339430 IGLV4-3A0A075B6K6 122 aa11.86□□□□□ -0.51
LITAF-201ENST00000339430 A8MTW9 85 aa11.86□□□□□ -0.51
LITAF-201ENST00000339430 M0R2P5 195 aa11.86□□□□□ -0.51
LITAF-201ENST00000339430 CEMP1Q6PRD7 247 aaPredicted RBP11.86□□□□□ -0.51
LITAF-201ENST00000339430 SFTA2Q6UW10 78 aa11.86□□□□□ -0.51
LITAF-201ENST00000339430 A0A0J9YXV3 536 aa11.86□□□□□ -0.51
LITAF-201ENST00000339430 J3QQQ9 107 aa11.86□□□□□ -0.51
LITAF-201ENST00000339430 APOMO95445 188 aa11.86□□□□□ -0.51
LITAF-201ENST00000339430 ZNF415Q09FC8 603 aa11.86□□□□□ -0.51
LITAF-201ENST00000339430 G3V4G9 280 aa11.85□□□□□ -0.51
LITAF-201ENST00000339430 CCL24O00175 119 aa11.85□□□□□ -0.51
LITAF-201ENST00000339430 RNASE13Q5GAN3 156 aaKnown RBP11.85□□□□□ -0.51
LITAF-201ENST00000339430 NFE4Q86UQ8 179 aa11.85□□□□□ -0.51
LITAF-201ENST00000339430 VCX2Q9H322 139 aa11.85□□□□□ -0.51
LITAF-201ENST00000339430 MRPL16Q9NX20 251 aaKnown RBP11.85□□□□□ -0.51
LITAF-201ENST00000339430 TNFRSF18Q9Y5U5 241 aa11.85□□□□□ -0.51
LITAF-201ENST00000339430 TMEM238LA0A1B0GVL6 79 aa11.85□□□□□ -0.51
LITAF-201ENST00000339430 A6NJY4 79 aa11.85□□□□□ -0.51
LITAF-201ENST00000339430 LGALS3P17931 250 aaKnown RBP11.85□□□□□ -0.51
LITAF-201ENST00000339430 WFDC2Q14508 124 aa11.85□□□□□ -0.51
LITAF-201ENST00000339430 ADARB2-AS1A8MUL3 147 aa11.84□□□□□ -0.51
LITAF-201ENST00000339430 FHL3Q13643 280 aa11.84□□□□□ -0.51
LITAF-201ENST00000339430 TENM1Q9UKZ4 2725 aa11.84□□□□□ -0.51
LITAF-201ENST00000339430 TRAV2A0A0B4J234 112 aa11.84□□□□□ -0.51
LITAF-201ENST00000339430 TEX48A0A1B0GUV7 120 aa11.84□□□□□ -0.51
LITAF-201ENST00000339430 A8MWV9 139 aa11.84□□□□□ -0.51
LITAF-201ENST00000339430 CFAP126Q5VTH2 177 aa11.84□□□□□ -0.51
LITAF-201ENST00000339430 AMELXQ99217 191 aa11.84□□□□□ -0.51
LITAF-201ENST00000339430 XCL2Q9UBD3 114 aa11.84□□□□□ -0.51
LITAF-201ENST00000339430 TMEM223A0PJW6 202 aa11.83□□□□□ -0.52
LITAF-201ENST00000339430 ZNF22P17026 224 aaPredicted RBP11.83□□□□□ -0.52
LITAF-201ENST00000339430 IGHV3OR16-12A0A075B7B8 117 aa11.83□□□□□ -0.52
LITAF-201ENST00000339430 UBE2D1P51668 147 aa11.83□□□□□ -0.52
LITAF-201ENST00000339430 ATRQ13535 2644 aa11.83□□□□□ -0.52
LITAF-201ENST00000339430 IGHV3-38A0A0C4DH36 116 aa11.82□□□□□ -0.52
LITAF-201ENST00000339430 RHODO00212 210 aa11.82□□□□□ -0.52
LITAF-201ENST00000339430 C11orf72Q8NBR9 251 aa11.82□□□□□ -0.52
LITAF-201ENST00000339430 INSP01308 110 aa11.82□□□□□ -0.52
LITAF-201ENST00000339430 SLC25A29Q8N8R3 303 aa11.82□□□□□ -0.52
LITAF-201ENST00000339430 TSPAN13O95857 204 aa11.81□□□□□ -0.52
LITAF-201ENST00000339430 IGHV3-30P01768 117 aa11.81□□□□□ -0.52
LITAF-201ENST00000339430 IGHV3-30-5P0DP03 117 aa11.81□□□□□ -0.52
LITAF-201ENST00000339430 AZU1P20160 251 aa11.81□□□□□ -0.52
LITAF-201ENST00000339430 ODF3L2Q3SX64 289 aa11.81□□□□□ -0.52
LITAF-201ENST00000339430 FAM104AQ969W3 186 aa11.81□□□□□ -0.52
LITAF-201ENST00000339430 EDA2RQ9HAV5 297 aa11.81□□□□□ -0.52
LITAF-201ENST00000339430 LEPROTO15243 131 aa11.81□□□□□ -0.52
LITAF-201ENST00000339430 SPXQ9BT56 116 aa11.81□□□□□ -0.52
LITAF-201ENST00000339430 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.8□□□□□ -0.52
LITAF-201ENST00000339430 LOC107984156A0A0G2JMH3 177 aa11.8□□□□□ -0.52
LITAF-201ENST00000339430 IGKV2-29A2NJV5 120 aaPredicted RBP11.8□□□□□ -0.52
LITAF-201ENST00000339430 ARL17AQ8IVW1 177 aa11.8□□□□□ -0.52
LITAF-201ENST00000339430 F8W1H4 67 aa11.79□□□□□ -0.52
LITAF-201ENST00000339430 SH2D6Q7Z4S9 175 aa11.79□□□□□ -0.52
LITAF-201ENST00000339430 NDUFA11Q86Y39 141 aa11.79□□□□□ -0.52
LITAF-201ENST00000339430 SPANXB1Q9NS25 103 aaPredicted RBP11.79□□□□□ -0.52
LITAF-201ENST00000339430 GAGE13Q4V321 117 aa11.79□□□□□ -0.52
LITAF-201ENST00000339430 STHQ8IWL8 128 aa11.78□□□□□ -0.52
LITAF-201ENST00000339430 NOTCH3Q9UM47 2321 aa11.78□□□□□ -0.52
LITAF-201ENST00000339430 CFC1BP0CG36 223 aa11.78□□□□□ -0.52
LITAF-201ENST00000339430 CFC1P0CG37 223 aa11.78□□□□□ -0.52
LITAF-201ENST00000339430 ETDBQ3ZM63 59 aa11.78□□□□□ -0.52
LITAF-201ENST00000339430 CHCHD7Q9BUK0 85 aa11.78□□□□□ -0.52
LITAF-201ENST00000339430 PYGO1Q9Y3Y4 419 aa11.78□□□□□ -0.52
LITAF-201ENST00000339430 TRAV8-3A0A0A6YYJ7 113 aa11.77□□□□□ -0.53
LITAF-201ENST00000339430 LINC00467Q9BRT7 94 aa11.77□□□□□ -0.53
LITAF-201ENST00000339430 PSMB2P49721 201 aa11.76□□□□□ -0.53
LITAF-201ENST00000339430 IGHV3-53P01767 116 aa11.76□□□□□ -0.53
LITAF-201ENST00000339430 KRTAP24-1Q3LI83 254 aa11.76□□□□□ -0.53
LITAF-201ENST00000339430 PRO0461Q9UI25 63 aa11.76□□□□□ -0.53
LITAF-201ENST00000339430 UBE2D4Q9Y2X8 147 aa11.76□□□□□ -0.53
LITAF-201ENST00000339430 IGHV3-30-3P0DP02 117 aa11.75□□□□□ -0.53
LITAF-201ENST00000339430 PIK3CD-AS1Q5SR53 167 aa11.75□□□□□ -0.53
LITAF-201ENST00000339430 C1orf158Q8N1D5 194 aa11.75□□□□□ -0.53
LITAF-201ENST00000339430 C10orf126Q8N4M7 172 aa11.75□□□□□ -0.53
LITAF-201ENST00000339430 TIMM21Q9BVV7 248 aa11.75□□□□□ -0.53
LITAF-201ENST00000339430 MRPS36P82909 103 aaKnown RBP11.75□□□□□ -0.53
LITAF-201ENST00000339430 Q6ZUT4 128 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms