RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 RPL23P62829 140 aaKnown RBP12.63□□□□□ -0.39
ITGA4-202ENST00000339307 RNASE7Q9H1E1 156 aaKnown RBP12.63□□□□□ -0.39
ITGA4-202ENST00000339307 IGHV1-24A0A0C4DH33 117 aa12.62□□□□□ -0.39
ITGA4-202ENST00000339307 F2Z2F3 143 aa12.62□□□□□ -0.39
ITGA4-202ENST00000339307 H7C1H1 209 aa12.62□□□□□ -0.39
ITGA4-202ENST00000339307 GATCO43716 136 aaKnown RBP12.62□□□□□ -0.39
ITGA4-202ENST00000339307 PNRC1Q12796 327 aaPredicted RBP12.62□□□□□ -0.39
ITGA4-202ENST00000339307 COMMD7Q86VX2 200 aa12.62□□□□□ -0.39
ITGA4-202ENST00000339307 ISOC2Q96AB3 205 aa12.62□□□□□ -0.39
ITGA4-202ENST00000339307 A8MWL6 223 aa12.62□□□□□ -0.39
ITGA4-202ENST00000339307 KRTAP29-1A8MX34 341 aaPredicted RBP12.62□□□□□ -0.39
ITGA4-202ENST00000339307 IGLC6P0CF74 106 aa12.62□□□□□ -0.39
ITGA4-202ENST00000339307 SUMO4Q6EEV6 95 aa12.62□□□□□ -0.39
ITGA4-202ENST00000339307 IGLV10-54A0A075B6I4 117 aa12.61□□□□□ -0.39
ITGA4-202ENST00000339307 TMEM218A2RU14 115 aa12.61□□□□□ -0.39
ITGA4-202ENST00000339307 FAM231BA6NCW3 169 aa12.61□□□□□ -0.39
ITGA4-202ENST00000339307 PRSS1P07477 247 aa12.61□□□□□ -0.39
ITGA4-202ENST00000339307 CACNG7P62955 275 aa12.61□□□□□ -0.39
ITGA4-202ENST00000339307 ADIRFQ15847 76 aa12.61□□□□□ -0.39
ITGA4-202ENST00000339307 WDR73Q6P4I2 378 aa12.61□□□□□ -0.39
ITGA4-202ENST00000339307 M0QY20 66 aa12.6□□□□□ -0.39
ITGA4-202ENST00000339307 REG3AQ06141 175 aa12.59□□□□□ -0.39
ITGA4-202ENST00000339307 IQCJQ1A5X6 159 aa12.59□□□□□ -0.39
ITGA4-202ENST00000339307 GFRA4Q9GZZ7 299 aa12.59□□□□□ -0.39
ITGA4-202ENST00000339307 PRR34Q9NV39 138 aa12.59□□□□□ -0.39
ITGA4-202ENST00000339307 FOXA3P55318 350 aaPredicted RBP12.58□□□□□ -0.4
ITGA4-202ENST00000339307 SEC11CQ9BY50 192 aa12.58□□□□□ -0.4
ITGA4-202ENST00000339307 TRGC1P0CF51 173 aa12.57□□□□□ -0.4
ITGA4-202ENST00000339307 DGAT2L7PQ6IED9 249 aa12.57□□□□□ -0.4
ITGA4-202ENST00000339307 RASL11AQ6T310 242 aa12.57□□□□□ -0.4
ITGA4-202ENST00000339307 LYZL1Q6UWQ5 148 aa12.57□□□□□ -0.4
ITGA4-202ENST00000339307 TSKUQ8WUA8 353 aa12.57□□□□□ -0.4
ITGA4-202ENST00000339307 TMEM243Q9BU79 118 aa12.57□□□□□ -0.4
ITGA4-202ENST00000339307 CNFNQ9BYD5 112 aa12.57□□□□□ -0.4
ITGA4-202ENST00000339307 UBE2L6O14933 153 aa12.56□□□□□ -0.4
ITGA4-202ENST00000339307 CTRLP40313 264 aa12.56□□□□□ -0.4
ITGA4-202ENST00000339307 RPL37AP61513 92 aaKnown RBP12.56□□□□□ -0.4
ITGA4-202ENST00000339307 V9GYV3 84 aa12.56□□□□□ -0.4
ITGA4-202ENST00000339307 F8W036 122 aa12.55□□□□□ -0.4
ITGA4-202ENST00000339307 PPP1R2P9O14990 202 aa12.55□□□□□ -0.4
ITGA4-202ENST00000339307 NTF3P20783 257 aa12.55□□□□□ -0.4
ITGA4-202ENST00000339307 DPH3P1Q9H4G8 78 aa12.55□□□□□ -0.4
ITGA4-202ENST00000339307 hDV102S1A0JD36 115 aa12.54□□□□□ -0.4
ITGA4-202ENST00000339307 TWIST1Q15672 202 aa12.54□□□□□ -0.4
ITGA4-202ENST00000339307 C9orf163Q8N9P6 203 aa12.54□□□□□ -0.4
ITGA4-202ENST00000339307 DPH3Q96FX2 82 aa12.54□□□□□ -0.4
ITGA4-202ENST00000339307 KRTAP10-4P60372 401 aaPredicted RBP12.54□□□□□ -0.4
ITGA4-202ENST00000339307 KRTAP26-1Q6PEX3 210 aa12.54□□□□□ -0.4
ITGA4-202ENST00000339307 C20orf203Q8NBC4 194 aa12.54□□□□□ -0.4
ITGA4-202ENST00000339307 CLRN3Q8NCR9 226 aa12.54□□□□□ -0.4
ITGA4-202ENST00000339307 NIT2Q9NQR4 276 aa12.54□□□□□ -0.4
ITGA4-202ENST00000339307 IGLV4-60A0A075B6I1 120 aa12.53□□□□□ -0.4
ITGA4-202ENST00000339307 C10orf91Q5T1B1 145 aa12.53□□□□□ -0.4
ITGA4-202ENST00000339307 GTSF1Q8WW33 167 aa12.53□□□□□ -0.4
ITGA4-202ENST00000339307 ANAPC16Q96DE5 110 aa12.53□□□□□ -0.4
ITGA4-202ENST00000339307 TRAV8-4A0A0B4J246 113 aa12.52□□□□□ -0.41
ITGA4-202ENST00000339307 MT-ND4LP03901 98 aa12.52□□□□□ -0.41
ITGA4-202ENST00000339307 ADCYAP1P18509 176 aa12.52□□□□□ -0.41
ITGA4-202ENST00000339307 AMTP48728 403 aa12.52□□□□□ -0.41
ITGA4-202ENST00000339307 COTL1Q14019 142 aa12.52□□□□□ -0.41
ITGA4-202ENST00000339307 BORCS7Q96B45 105 aa12.52□□□□□ -0.41
ITGA4-202ENST00000339307 AP5S1Q9NUS5 200 aa12.52□□□□□ -0.41
ITGA4-202ENST00000339307 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.52□□□□□ -0.41
ITGA4-202ENST00000339307 IGKV3OR2-268A0A0C4DH90 116 aa12.51□□□□□ -0.41
ITGA4-202ENST00000339307 NAT8BQ9UHF3 227 aa12.51□□□□□ -0.41
ITGA4-202ENST00000339307 A0A1B0GUV1 79 aa12.5□□□□□ -0.41
ITGA4-202ENST00000339307 SMIM27A0A1W2PRY6 76 aa12.5□□□□□ -0.41
ITGA4-202ENST00000339307 HIGD1CA8MV81 97 aa12.5□□□□□ -0.41
ITGA4-202ENST00000339307 OXTP01178 125 aa12.5□□□□□ -0.41
ITGA4-202ENST00000339307 CARHSP1Q9Y2V2 147 aaKnown RBP12.5□□□□□ -0.41
ITGA4-202ENST00000339307 SDIM1Q6ZPB5 146 aa12.49□□□□□ -0.41
ITGA4-202ENST00000339307 PGLYRP4Q96LB8 373 aa12.49□□□□□ -0.41
ITGA4-202ENST00000339307 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.48□□□□□ -0.41
ITGA4-202ENST00000339307 TRAV26-2A0A0B4J265 109 aa12.48□□□□□ -0.41
ITGA4-202ENST00000339307 A0A1B0GUT8 65 aa12.48□□□□□ -0.41
ITGA4-202ENST00000339307 PANO1I0J062 215 aa12.48□□□□□ -0.41
ITGA4-202ENST00000339307 NDUFA5Q16718 116 aa12.48□□□□□ -0.41
ITGA4-202ENST00000339307 SERTAD4-AS1Q5TG53 156 aa12.47□□□□□ -0.41
ITGA4-202ENST00000339307 SMIM15Q7Z3B0 74 aa12.47□□□□□ -0.41
ITGA4-202ENST00000339307 CTDSP1Q9GZU7 261 aa12.47□□□□□ -0.41
ITGA4-202ENST00000339307 IGHV3-64A0A075B6Q5 118 aa12.46□□□□□ -0.41
ITGA4-202ENST00000339307 AMMECR1LQ6DCA0 310 aa12.46□□□□□ -0.41
ITGA4-202ENST00000339307 NUP35Q8NFH5 326 aa12.46□□□□□ -0.41
ITGA4-202ENST00000339307 A0A1B0GW15 77 aa12.45□□□□□ -0.42
ITGA4-202ENST00000339307 RIGQ13278 110 aa12.45□□□□□ -0.42
ITGA4-202ENST00000339307 GATD1Q8NB37 220 aa12.45□□□□□ -0.42
ITGA4-202ENST00000339307 GAGE12HA6NDE8 117 aa12.45□□□□□ -0.42
ITGA4-202ENST00000339307 CNBPP62633 177 aaKnown RBP12.45□□□□□ -0.42
ITGA4-202ENST00000339307 RNASEKQ6P5S7 137 aaKnown RBP12.45□□□□□ -0.42
ITGA4-202ENST00000339307 IMMP2LQ96T52 175 aa12.45□□□□□ -0.42
ITGA4-202ENST00000339307 TMEM242Q9NWH2 141 aa12.45□□□□□ -0.42
ITGA4-202ENST00000339307 HNRNPA3P51991 378 aaKnown RBP12.44□□□□□ -0.42
ITGA4-202ENST00000339307 RHEBQ15382 184 aa12.44□□□□□ -0.42
ITGA4-202ENST00000339307 RPL39LQ96EH5 51 aaKnown RBP12.44□□□□□ -0.42
ITGA4-202ENST00000339307 CFAP161Q6P656 301 aa12.43□□□□□ -0.42
ITGA4-202ENST00000339307 S100A8P05109 93 aa12.42□□□□□ -0.42
ITGA4-202ENST00000339307 CHTF8P0CG12 524 aa12.42□□□□□ -0.42
ITGA4-202ENST00000339307 ATP5L2Q7Z4Y8 100 aa12.42□□□□□ -0.42
ITGA4-202ENST00000339307 TMEM191AQ9H0A3 160 aa12.42□□□□□ -0.42
ITGA4-202ENST00000339307 LRP1Q07954 4544 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms