RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 RPL23P62829 140 aaKnown RBP12.63□□□□□ -0.39
ITGA4-202ENST00000339307 RNASE7Q9H1E1 156 aaKnown RBP12.63□□□□□ -0.39
ITGA4-202ENST00000339307 IGHV1-24A0A0C4DH33 117 aa12.62□□□□□ -0.39
ITGA4-202ENST00000339307 F2Z2F3 143 aa12.62□□□□□ -0.39
ITGA4-202ENST00000339307 H7C1H1 209 aa12.62□□□□□ -0.39
ITGA4-202ENST00000339307 GATCO43716 136 aaKnown RBP12.62□□□□□ -0.39
ITGA4-202ENST00000339307 PNRC1Q12796 327 aaPredicted RBP12.62□□□□□ -0.39
ITGA4-202ENST00000339307 COMMD7Q86VX2 200 aa12.62□□□□□ -0.39
ITGA4-202ENST00000339307 ISOC2Q96AB3 205 aa12.62□□□□□ -0.39
ITGA4-202ENST00000339307 A8MWL6 223 aa12.62□□□□□ -0.39
ITGA4-202ENST00000339307 KRTAP29-1A8MX34 341 aaPredicted RBP12.62□□□□□ -0.39
ITGA4-202ENST00000339307 IGLC6P0CF74 106 aa12.62□□□□□ -0.39
ITGA4-202ENST00000339307 SUMO4Q6EEV6 95 aa12.62□□□□□ -0.39
ITGA4-202ENST00000339307 IGLV10-54A0A075B6I4 117 aa12.61□□□□□ -0.39
ITGA4-202ENST00000339307 TMEM218A2RU14 115 aa12.61□□□□□ -0.39
ITGA4-202ENST00000339307 FAM231BA6NCW3 169 aa12.61□□□□□ -0.39
ITGA4-202ENST00000339307 PRSS1P07477 247 aa12.61□□□□□ -0.39
ITGA4-202ENST00000339307 CACNG7P62955 275 aa12.61□□□□□ -0.39
ITGA4-202ENST00000339307 ADIRFQ15847 76 aa12.61□□□□□ -0.39
ITGA4-202ENST00000339307 WDR73Q6P4I2 378 aa12.61□□□□□ -0.39
ITGA4-202ENST00000339307 M0QY20 66 aa12.6□□□□□ -0.39
ITGA4-202ENST00000339307 REG3AQ06141 175 aa12.59□□□□□ -0.39
ITGA4-202ENST00000339307 IQCJQ1A5X6 159 aa12.59□□□□□ -0.39
ITGA4-202ENST00000339307 GFRA4Q9GZZ7 299 aa12.59□□□□□ -0.39
ITGA4-202ENST00000339307 PRR34Q9NV39 138 aa12.59□□□□□ -0.39
ITGA4-202ENST00000339307 FOXA3P55318 350 aaPredicted RBP12.58□□□□□ -0.4
ITGA4-202ENST00000339307 SEC11CQ9BY50 192 aa12.58□□□□□ -0.4
ITGA4-202ENST00000339307 TRGC1P0CF51 173 aa12.57□□□□□ -0.4
ITGA4-202ENST00000339307 DGAT2L7PQ6IED9 249 aa12.57□□□□□ -0.4
ITGA4-202ENST00000339307 RASL11AQ6T310 242 aa12.57□□□□□ -0.4
ITGA4-202ENST00000339307 LYZL1Q6UWQ5 148 aa12.57□□□□□ -0.4
ITGA4-202ENST00000339307 TSKUQ8WUA8 353 aa12.57□□□□□ -0.4
ITGA4-202ENST00000339307 TMEM243Q9BU79 118 aa12.57□□□□□ -0.4
ITGA4-202ENST00000339307 CNFNQ9BYD5 112 aa12.57□□□□□ -0.4
ITGA4-202ENST00000339307 UBE2L6O14933 153 aa12.56□□□□□ -0.4
ITGA4-202ENST00000339307 CTRLP40313 264 aa12.56□□□□□ -0.4
ITGA4-202ENST00000339307 RPL37AP61513 92 aaKnown RBP12.56□□□□□ -0.4
ITGA4-202ENST00000339307 V9GYV3 84 aa12.56□□□□□ -0.4
ITGA4-202ENST00000339307 F8W036 122 aa12.55□□□□□ -0.4
ITGA4-202ENST00000339307 PPP1R2P9O14990 202 aa12.55□□□□□ -0.4
ITGA4-202ENST00000339307 NTF3P20783 257 aa12.55□□□□□ -0.4
ITGA4-202ENST00000339307 DPH3P1Q9H4G8 78 aa12.55□□□□□ -0.4
ITGA4-202ENST00000339307 hDV102S1A0JD36 115 aa12.54□□□□□ -0.4
ITGA4-202ENST00000339307 TWIST1Q15672 202 aa12.54□□□□□ -0.4
ITGA4-202ENST00000339307 C9orf163Q8N9P6 203 aa12.54□□□□□ -0.4
ITGA4-202ENST00000339307 DPH3Q96FX2 82 aa12.54□□□□□ -0.4
ITGA4-202ENST00000339307 KRTAP10-4P60372 401 aaPredicted RBP12.54□□□□□ -0.4
ITGA4-202ENST00000339307 KRTAP26-1Q6PEX3 210 aa12.54□□□□□ -0.4
ITGA4-202ENST00000339307 C20orf203Q8NBC4 194 aa12.54□□□□□ -0.4
ITGA4-202ENST00000339307 CLRN3Q8NCR9 226 aa12.54□□□□□ -0.4
ITGA4-202ENST00000339307 NIT2Q9NQR4 276 aa12.54□□□□□ -0.4
ITGA4-202ENST00000339307 IGLV4-60A0A075B6I1 120 aa12.53□□□□□ -0.4
ITGA4-202ENST00000339307 C10orf91Q5T1B1 145 aa12.53□□□□□ -0.4
ITGA4-202ENST00000339307 GTSF1Q8WW33 167 aa12.53□□□□□ -0.4
ITGA4-202ENST00000339307 ANAPC16Q96DE5 110 aa12.53□□□□□ -0.4
ITGA4-202ENST00000339307 TRAV8-4A0A0B4J246 113 aa12.52□□□□□ -0.41
ITGA4-202ENST00000339307 MT-ND4LP03901 98 aa12.52□□□□□ -0.41
ITGA4-202ENST00000339307 ADCYAP1P18509 176 aa12.52□□□□□ -0.41
ITGA4-202ENST00000339307 AMTP48728 403 aa12.52□□□□□ -0.41
ITGA4-202ENST00000339307 COTL1Q14019 142 aa12.52□□□□□ -0.41
ITGA4-202ENST00000339307 BORCS7Q96B45 105 aa12.52□□□□□ -0.41
ITGA4-202ENST00000339307 AP5S1Q9NUS5 200 aa12.52□□□□□ -0.41
ITGA4-202ENST00000339307 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.52□□□□□ -0.41
ITGA4-202ENST00000339307 IGKV3OR2-268A0A0C4DH90 116 aa12.51□□□□□ -0.41
ITGA4-202ENST00000339307 NAT8BQ9UHF3 227 aa12.51□□□□□ -0.41
ITGA4-202ENST00000339307 A0A1B0GUV1 79 aa12.5□□□□□ -0.41
ITGA4-202ENST00000339307 SMIM27A0A1W2PRY6 76 aa12.5□□□□□ -0.41
ITGA4-202ENST00000339307 HIGD1CA8MV81 97 aa12.5□□□□□ -0.41
ITGA4-202ENST00000339307 OXTP01178 125 aa12.5□□□□□ -0.41
ITGA4-202ENST00000339307 CARHSP1Q9Y2V2 147 aaKnown RBP12.5□□□□□ -0.41
ITGA4-202ENST00000339307 SDIM1Q6ZPB5 146 aa12.49□□□□□ -0.41
ITGA4-202ENST00000339307 PGLYRP4Q96LB8 373 aa12.49□□□□□ -0.41
ITGA4-202ENST00000339307 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.48□□□□□ -0.41
ITGA4-202ENST00000339307 TRAV26-2A0A0B4J265 109 aa12.48□□□□□ -0.41
ITGA4-202ENST00000339307 A0A1B0GUT8 65 aa12.48□□□□□ -0.41
ITGA4-202ENST00000339307 PANO1I0J062 215 aa12.48□□□□□ -0.41
ITGA4-202ENST00000339307 NDUFA5Q16718 116 aa12.48□□□□□ -0.41
ITGA4-202ENST00000339307 SERTAD4-AS1Q5TG53 156 aa12.47□□□□□ -0.41
ITGA4-202ENST00000339307 SMIM15Q7Z3B0 74 aa12.47□□□□□ -0.41
ITGA4-202ENST00000339307 CTDSP1Q9GZU7 261 aa12.47□□□□□ -0.41
ITGA4-202ENST00000339307 IGHV3-64A0A075B6Q5 118 aa12.46□□□□□ -0.41
ITGA4-202ENST00000339307 AMMECR1LQ6DCA0 310 aa12.46□□□□□ -0.41
ITGA4-202ENST00000339307 NUP35Q8NFH5 326 aa12.46□□□□□ -0.41
ITGA4-202ENST00000339307 A0A1B0GW15 77 aa12.45□□□□□ -0.42
ITGA4-202ENST00000339307 RIGQ13278 110 aa12.45□□□□□ -0.42
ITGA4-202ENST00000339307 GATD1Q8NB37 220 aa12.45□□□□□ -0.42
ITGA4-202ENST00000339307 GAGE12HA6NDE8 117 aa12.45□□□□□ -0.42
ITGA4-202ENST00000339307 CNBPP62633 177 aaKnown RBP12.45□□□□□ -0.42
ITGA4-202ENST00000339307 RNASEKQ6P5S7 137 aaKnown RBP12.45□□□□□ -0.42
ITGA4-202ENST00000339307 IMMP2LQ96T52 175 aa12.45□□□□□ -0.42
ITGA4-202ENST00000339307 TMEM242Q9NWH2 141 aa12.45□□□□□ -0.42
ITGA4-202ENST00000339307 HNRNPA3P51991 378 aaKnown RBP12.44□□□□□ -0.42
ITGA4-202ENST00000339307 RHEBQ15382 184 aa12.44□□□□□ -0.42
ITGA4-202ENST00000339307 RPL39LQ96EH5 51 aaKnown RBP12.44□□□□□ -0.42
ITGA4-202ENST00000339307 CFAP161Q6P656 301 aa12.43□□□□□ -0.42
ITGA4-202ENST00000339307 S100A8P05109 93 aa12.42□□□□□ -0.42
ITGA4-202ENST00000339307 CHTF8P0CG12 524 aa12.42□□□□□ -0.42
ITGA4-202ENST00000339307 ATP5L2Q7Z4Y8 100 aa12.42□□□□□ -0.42
ITGA4-202ENST00000339307 TMEM191AQ9H0A3 160 aa12.42□□□□□ -0.42
ITGA4-202ENST00000339307 LRP1Q07954 4544 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms