RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 FAM231AP0DMU4 169 aa13.91□□□□□ -0.18
PSPC1-201ENST00000338910 FAM231CP0DMU5 169 aa13.91□□□□□ -0.18
PSPC1-201ENST00000338910 LGALS3P17931 250 aaKnown RBP13.91□□□□□ -0.18
PSPC1-201ENST00000338910 NOTCH2Q04721 2471 aa13.9□□□□□ -0.18
PSPC1-201ENST00000338910 B5MCH6 92 aa13.9□□□□□ -0.18
PSPC1-201ENST00000338910 VCYO14598 125 aa13.9□□□□□ -0.18
PSPC1-201ENST00000338910 MTORP42345 2549 aa13.9□□□□□ -0.18
PSPC1-201ENST00000338910 A0A0B4J2C4 111 aa13.9□□□□□ -0.18
PSPC1-201ENST00000338910 GAGE2BQ13066 116 aa13.9□□□□□ -0.18
PSPC1-201ENST00000338910 GAGE2EQ4V326 116 aa13.9□□□□□ -0.18
PSPC1-201ENST00000338910 GAGE2DQ9UEU5 116 aa13.9□□□□□ -0.18
PSPC1-201ENST00000338910 TRAV4A0A0B4J268 109 aa13.89□□□□□ -0.19
PSPC1-201ENST00000338910 SYNJ2BPP57105 145 aa13.89□□□□□ -0.19
PSPC1-201ENST00000338910 SUMO4Q6EEV6 95 aa13.89□□□□□ -0.19
PSPC1-201ENST00000338910 SNCGO76070 127 aa13.89□□□□□ -0.19
PSPC1-201ENST00000338910 NDUFV3P56181 108 aaKnown RBP13.89□□□□□ -0.19
PSPC1-201ENST00000338910 Q8N1Y9 231 aa13.89□□□□□ -0.19
PSPC1-201ENST00000338910 CRLF1O75462 422 aa13.88□□□□□ -0.19
PSPC1-201ENST00000338910 ELANEP08246 267 aa13.88□□□□□ -0.19
PSPC1-201ENST00000338910 NTN5Q8WTR8 489 aaPredicted RBP13.88□□□□□ -0.19
PSPC1-201ENST00000338910 LINC01600Q96MT4 127 aa13.88□□□□□ -0.19
PSPC1-201ENST00000338910 JPT2Q9H910 190 aa13.88□□□□□ -0.19
PSPC1-201ENST00000338910 SDHAF1A6NFY7 115 aa13.87□□□□□ -0.19
PSPC1-201ENST00000338910 DCANP1Q8TF63 244 aa13.87□□□□□ -0.19
PSPC1-201ENST00000338910 TRBV27A0A0K0K1C4 114 aa13.86□□□□□ -0.19
PSPC1-201ENST00000338910 LEPROTO15243 131 aa13.86□□□□□ -0.19
PSPC1-201ENST00000338910 TMEM223A0PJW6 202 aa13.86□□□□□ -0.19
PSPC1-201ENST00000338910 H7C2G1 150 aa13.86□□□□□ -0.19
PSPC1-201ENST00000338910 LINC01620Q4KN68 170 aa13.86□□□□□ -0.19
PSPC1-201ENST00000338910 MUSTN1Q8IVN3 82 aa13.86□□□□□ -0.19
PSPC1-201ENST00000338910 UBE2E2Q96LR5 201 aa13.86□□□□□ -0.19
PSPC1-201ENST00000338910 TRAV2A0A0B4J234 112 aa13.85□□□□□ -0.19
PSPC1-201ENST00000338910 TRBV7-9A0A0J9YWB2 115 aa13.85□□□□□ -0.19
PSPC1-201ENST00000338910 ID1P41134 155 aa13.85□□□□□ -0.19
PSPC1-201ENST00000338910 HOXD3P31249 432 aaPredicted RBP13.85□□□□□ -0.19
PSPC1-201ENST00000338910 C18orf65Q6ZTR6 163 aa13.85□□□□□ -0.19
PSPC1-201ENST00000338910 RPL13AP40429 203 aaKnown RBP13.84□□□□□ -0.19
PSPC1-201ENST00000338910 KRTAP1-1Q07627 177 aa13.84□□□□□ -0.19
PSPC1-201ENST00000338910 ATXN8Q156A1 80 aa13.84□□□□□ -0.19
PSPC1-201ENST00000338910 Q6Q795 121 aa13.84□□□□□ -0.19
PSPC1-201ENST00000338910 SETD2Q9BYW2 2564 aaPredicted RBP13.84□□□□□ -0.19
PSPC1-201ENST00000338910 A0A087WWL8 130 aa13.84□□□□□ -0.19
PSPC1-201ENST00000338910 TRBV6-5A0A0K0K1A5 114 aa13.84□□□□□ -0.19
PSPC1-201ENST00000338910 DEFB136Q30KP8 78 aa13.84□□□□□ -0.19
PSPC1-201ENST00000338910 SPXQ9BT56 116 aa13.84□□□□□ -0.19
PSPC1-201ENST00000338910 HERV-K104P63124 156 aa13.83□□□□□ -0.19
PSPC1-201ENST00000338910 ODF3Q96PU9 254 aa13.83□□□□□ -0.19
PSPC1-201ENST00000338910 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.83□□□□□ -0.2
PSPC1-201ENST00000338910 GAGE12JA6NER3 117 aa13.83□□□□□ -0.2
PSPC1-201ENST00000338910 GAGE7O76087 117 aa13.83□□□□□ -0.2
PSPC1-201ENST00000338910 GAGE12FP0CL80 117 aa13.83□□□□□ -0.2
PSPC1-201ENST00000338910 GAGE12GP0CL81 117 aa13.83□□□□□ -0.2
PSPC1-201ENST00000338910 GAGE12IP0CL82 117 aa13.83□□□□□ -0.2
PSPC1-201ENST00000338910 GAGE4Q13068 117 aa13.83□□□□□ -0.2
PSPC1-201ENST00000338910 OPRPNQ99935 248 aaPredicted RBP13.83□□□□□ -0.2
PSPC1-201ENST00000338910 TNFRSF18Q9Y5U5 241 aa13.83□□□□□ -0.2
PSPC1-201ENST00000338910 TEX49A0A1B0GTD5 131 aa13.82□□□□□ -0.2
PSPC1-201ENST00000338910 F5H697 171 aa13.82□□□□□ -0.2
PSPC1-201ENST00000338910 IFITM1P13164 125 aa13.82□□□□□ -0.2
PSPC1-201ENST00000338910 HIST2H2BDQ6DRA6 164 aa13.82□□□□□ -0.2
PSPC1-201ENST00000338910 Q8N2B8 174 aa13.82□□□□□ -0.2
PSPC1-201ENST00000338910 LGALS9O00182 355 aa13.82□□□□□ -0.2
PSPC1-201ENST00000338910 TRBV10-2A0A0K0K1G8 114 aa13.81□□□□□ -0.2
PSPC1-201ENST00000338910 CCDC179H3BU77 68 aa13.81□□□□□ -0.2
PSPC1-201ENST00000338910 ZNF22P17026 224 aaPredicted RBP13.81□□□□□ -0.2
PSPC1-201ENST00000338910 Q1RN00 199 aa13.81□□□□□ -0.2
PSPC1-201ENST00000338910 TTC32Q5I0X7 151 aa13.81□□□□□ -0.2
PSPC1-201ENST00000338910 YAE1D1Q9NRH1 226 aa13.81□□□□□ -0.2
PSPC1-201ENST00000338910 A0A0J9YX75 114 aa13.81□□□□□ -0.2
PSPC1-201ENST00000338910 KLLNB2CW77 178 aa13.81□□□□□ -0.2
PSPC1-201ENST00000338910 M0R2P5 195 aa13.81□□□□□ -0.2
PSPC1-201ENST00000338910 RNF152Q8N8N0 203 aa13.81□□□□□ -0.2
PSPC1-201ENST00000338910 SORL1Q92673 2214 aa13.8□□□□□ -0.2
PSPC1-201ENST00000338910 ANK3Q12955 4377 aaKnown RBP13.8□□□□□ -0.2
PSPC1-201ENST00000338910 TRBV30A0A0K0K1B3 111 aa13.8□□□□□ -0.2
PSPC1-201ENST00000338910 IGKV3-20P01619 116 aa13.8□□□□□ -0.2
PSPC1-201ENST00000338910 NSUN5P1Q3KNT7 163 aa13.8□□□□□ -0.2
PSPC1-201ENST00000338910 TRAV8-4A0A0B4J246 113 aa13.8□□□□□ -0.2
PSPC1-201ENST00000338910 SLURP1P55000 103 aa13.8□□□□□ -0.2
PSPC1-201ENST00000338910 FAM159AQ6UWV7 190 aa13.8□□□□□ -0.2
PSPC1-201ENST00000338910 DUX3Q96PT4 197 aa13.8□□□□□ -0.2
PSPC1-201ENST00000338910 ZNF256Q9Y2P7 627 aaPredicted RBP13.8□□□□□ -0.2
PSPC1-201ENST00000338910 IGHV3-64A0A075B6Q5 118 aa13.79□□□□□ -0.2
PSPC1-201ENST00000338910 DNAJC9-AS1A6NH13 148 aa13.79□□□□□ -0.2
PSPC1-201ENST00000338910 TRIAP1O43715 76 aa13.79□□□□□ -0.2
PSPC1-201ENST00000338910 KHDC1LQ5JSQ8 128 aa13.79□□□□□ -0.2
PSPC1-201ENST00000338910 SNRPD3P62318 126 aaKnown RBP13.79□□□□□ -0.2
PSPC1-201ENST00000338910 RHOHQ15669 191 aa13.79□□□□□ -0.2
PSPC1-201ENST00000338910 TMEM86BQ8N661 226 aa13.79□□□□□ -0.2
PSPC1-201ENST00000338910 ESM1Q9NQ30 184 aa13.79□□□□□ -0.2
PSPC1-201ENST00000338910 A0A0J9YXY3 114 aa13.78□□□□□ -0.2
PSPC1-201ENST00000338910 C15orf53Q8NAA6 179 aa13.78□□□□□ -0.2
PSPC1-201ENST00000338910 K7EQG2 157 aa13.78□□□□□ -0.2
PSPC1-201ENST00000338910 H3BMM0 161 aa13.77□□□□□ -0.21
PSPC1-201ENST00000338910 UBE2WQ96B02 151 aa13.77□□□□□ -0.21
PSPC1-201ENST00000338910 MDFICQ9P1T7 246 aa13.77□□□□□ -0.21
PSPC1-201ENST00000338910 M0QY20 66 aa13.76□□□□□ -0.21
PSPC1-201ENST00000338910 FAM74A4Q5TZK3 123 aa13.76□□□□□ -0.21
PSPC1-201ENST00000338910 Q6ZSV7 163 aa13.76□□□□□ -0.21
PSPC1-201ENST00000338910 TRAV12-3A0A0B4J271 114 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms