RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 IGIPA6NJ69 53 aa10.53□□□□□ -0.72
PCDH8-201ENST00000338862 UBE2D1P51668 147 aa10.53□□□□□ -0.72
PCDH8-201ENST00000338862 FHL3Q13643 280 aa10.53□□□□□ -0.72
PCDH8-201ENST00000338862 Q9UF83 564 aa10.53□□□□□ -0.72
PCDH8-201ENST00000338862 RNASE1P07998 156 aaKnown RBP10.53□□□□□ -0.72
PCDH8-201ENST00000338862 ZNF22P17026 224 aaPredicted RBP10.53□□□□□ -0.72
PCDH8-201ENST00000338862 TCTEX1D4Q5JR98 221 aa10.53□□□□□ -0.72
PCDH8-201ENST00000338862 IGHV4-4A0A075B6R2 117 aa10.52□□□□□ -0.73
PCDH8-201ENST00000338862 ELANEP08246 267 aa10.52□□□□□ -0.73
PCDH8-201ENST00000338862 POLR2KP53803 58 aaKnown RBP10.52□□□□□ -0.73
PCDH8-201ENST00000338862 CIRBPQ14011 172 aaKnown RBP10.52□□□□□ -0.73
PCDH8-201ENST00000338862 LEPROTO15243 131 aa10.51□□□□□ -0.73
PCDH8-201ENST00000338862 IGHV3-33P01772 117 aa10.51□□□□□ -0.73
PCDH8-201ENST00000338862 DEFB112Q30KQ8 113 aa10.51□□□□□ -0.73
PCDH8-201ENST00000338862 ZNF462Q96JM2 2506 aa10.51□□□□□ -0.73
PCDH8-201ENST00000338862 TRGV1A0A0A0MS02 117 aa10.51□□□□□ -0.73
PCDH8-201ENST00000338862 C20orf203Q8NBC4 194 aa10.51□□□□□ -0.73
PCDH8-201ENST00000338862 U3KQE9 123 aa10.51□□□□□ -0.73
PCDH8-201ENST00000338862 A0A0J9YXY3 114 aa10.51□□□□□ -0.73
PCDH8-201ENST00000338862 TRIAP1O43715 76 aa10.51□□□□□ -0.73
PCDH8-201ENST00000338862 HOXD3P31249 432 aaPredicted RBP10.51□□□□□ -0.73
PCDH8-201ENST00000338862 TIMM17AQ99595 171 aa10.51□□□□□ -0.73
PCDH8-201ENST00000338862 M0QY20 66 aa10.5□□□□□ -0.73
PCDH8-201ENST00000338862 MSMBP08118 114 aa10.5□□□□□ -0.73
PCDH8-201ENST00000338862 SLURP1P55000 103 aa10.5□□□□□ -0.73
PCDH8-201ENST00000338862 CRLF1O75462 422 aa10.5□□□□□ -0.73
PCDH8-201ENST00000338862 OR13C6PQ8NH95 151 aa10.5□□□□□ -0.73
PCDH8-201ENST00000338862 UCNP55089 124 aa10.49□□□□□ -0.73
PCDH8-201ENST00000338862 FBXL19-AS1Q494R0 122 aa10.49□□□□□ -0.73
PCDH8-201ENST00000338862 IGLV4-3A0A075B6K6 122 aa10.49□□□□□ -0.73
PCDH8-201ENST00000338862 COX6B1P14854 86 aa10.49□□□□□ -0.73
PCDH8-201ENST00000338862 PRIMA1Q86XR5 153 aa10.49□□□□□ -0.73
PCDH8-201ENST00000338862 TRGV11A0A075B6L2 103 aa10.49□□□□□ -0.73
PCDH8-201ENST00000338862 IGHV4OR15-8A0A075B7B6 117 aa10.48□□□□□ -0.73
PCDH8-201ENST00000338862 A0A087WW49 117 aa10.48□□□□□ -0.73
PCDH8-201ENST00000338862 IGHG2P01859 326 aa10.48□□□□□ -0.73
PCDH8-201ENST00000338862 AVPP01185 164 aa10.48□□□□□ -0.73
PCDH8-201ENST00000338862 SMIM20Q8N5G0 67 aa10.48□□□□□ -0.73
PCDH8-201ENST00000338862 CITED1Q99966 193 aa10.48□□□□□ -0.73
PCDH8-201ENST00000338862 IFITM1P13164 125 aa10.48□□□□□ -0.73
PCDH8-201ENST00000338862 Q9H8V8 135 aa10.48□□□□□ -0.73
PCDH8-201ENST00000338862 ICOSQ9Y6W8 199 aa10.48□□□□□ -0.73
PCDH8-201ENST00000338862 A0A0J9YX75 114 aa10.47□□□□□ -0.73
PCDH8-201ENST00000338862 TMEM223A0PJW6 202 aa10.47□□□□□ -0.73
PCDH8-201ENST00000338862 UBE2D3P61077 147 aa10.47□□□□□ -0.73
PCDH8-201ENST00000338862 UBE2D2P62837 147 aa10.47□□□□□ -0.73
PCDH8-201ENST00000338862 C19orf54Q5BKX5 351 aa10.47□□□□□ -0.73
PCDH8-201ENST00000338862 GAGE12JA6NER3 117 aa10.47□□□□□ -0.73
PCDH8-201ENST00000338862 LINC01546A6NGU7 62 aa10.47□□□□□ -0.73
PCDH8-201ENST00000338862 NDUFA7O95182 113 aa10.47□□□□□ -0.73
PCDH8-201ENST00000338862 GAGE4Q13068 117 aa10.47□□□□□ -0.73
PCDH8-201ENST00000338862 GAGE5Q13069 117 aa10.47□□□□□ -0.73
PCDH8-201ENST00000338862 GAGE6Q13070 117 aa10.47□□□□□ -0.73
PCDH8-201ENST00000338862 UTP20O75691 2785 aaKnown RBP10.47□□□□□ -0.73
PCDH8-201ENST00000338862 FASNP49327 2511 aaKnown RBP10.47□□□□□ -0.73
PCDH8-201ENST00000338862 ADAMTSL4-AS1Q5T5F5 129 aa10.46□□□□□ -0.73
PCDH8-201ENST00000338862 CDKN2A-AS1Q9UH64 79 aa10.46□□□□□ -0.73
PCDH8-201ENST00000338862 UBE2L6O14933 153 aa10.46□□□□□ -0.74
PCDH8-201ENST00000338862 LINC00315P59091 139 aa10.46□□□□□ -0.74
PCDH8-201ENST00000338862 C18orf65Q6ZTR6 163 aa10.46□□□□□ -0.74
PCDH8-201ENST00000338862 TRBV27A0A0K0K1C4 114 aa10.45□□□□□ -0.74
PCDH8-201ENST00000338862 RNF223E7ERA6 249 aa10.45□□□□□ -0.74
PCDH8-201ENST00000338862 CCDC179H3BU77 68 aa10.45□□□□□ -0.74
PCDH8-201ENST00000338862 SOCS3O14543 225 aa10.45□□□□□ -0.74
PCDH8-201ENST00000338862 ATP6V0E2Q8NHE4 81 aa10.45□□□□□ -0.74
PCDH8-201ENST00000338862 CHD6Q8TD26 2715 aa10.45□□□□□ -0.74
PCDH8-201ENST00000338862 GAGE7O76087 117 aa10.45□□□□□ -0.74
PCDH8-201ENST00000338862 GAGE12FP0CL80 117 aa10.45□□□□□ -0.74
PCDH8-201ENST00000338862 GAGE12GP0CL81 117 aa10.45□□□□□ -0.74
PCDH8-201ENST00000338862 GAGE12IP0CL82 117 aa10.45□□□□□ -0.74
PCDH8-201ENST00000338862 DCANP1Q8TF63 244 aa10.45□□□□□ -0.74
PCDH8-201ENST00000338862 KLLNB2CW77 178 aa10.44□□□□□ -0.74
PCDH8-201ENST00000338862 KIF25-AS1Q9Y6Z4 181 aa10.44□□□□□ -0.74
PCDH8-201ENST00000338862 CHCHD5Q9BSY4 110 aa10.44□□□□□ -0.74
PCDH8-201ENST00000338862 B4DSR2 109 aa10.44□□□□□ -0.74
PCDH8-201ENST00000338862 RHOHQ15669 191 aa10.44□□□□□ -0.74
PCDH8-201ENST00000338862 TRGV2A0A075B6R0 118 aa10.43□□□□□ -0.74
PCDH8-201ENST00000338862 GAGE2AQ6NT46 116 aa10.43□□□□□ -0.74
PCDH8-201ENST00000338862 TMEM263Q8WUH6 116 aaKnown RBP10.43□□□□□ -0.74
PCDH8-201ENST00000338862 LINC00467Q9BRT7 94 aa10.43□□□□□ -0.74
PCDH8-201ENST00000338862 TRBV7-9A0A0J9YWB2 115 aa10.43□□□□□ -0.74
PCDH8-201ENST00000338862 PFN2P35080 140 aa10.43□□□□□ -0.74
PCDH8-201ENST00000338862 LINC00158P58513 81 aa10.42□□□□□ -0.74
PCDH8-201ENST00000338862 DOPEY1Q5JWR5 2465 aa10.42□□□□□ -0.74
PCDH8-201ENST00000338862 A6NDX4 124 aa10.42□□□□□ -0.74
PCDH8-201ENST00000338862 NDUFV3P56181 108 aaKnown RBP10.42□□□□□ -0.74
PCDH8-201ENST00000338862 POM121L12Q8N7R1 296 aa10.42□□□□□ -0.74
PCDH8-201ENST00000338862 Q9HAA7 133 aa10.42□□□□□ -0.74
PCDH8-201ENST00000338862 LGALS9O00182 355 aa10.42□□□□□ -0.74
PCDH8-201ENST00000338862 DNAL4O96015 105 aa10.41□□□□□ -0.74
PCDH8-201ENST00000338862 ZNF415Q09FC8 603 aa10.41□□□□□ -0.74
PCDH8-201ENST00000338862 TRBV10-2A0A0K0K1G8 114 aa10.41□□□□□ -0.74
PCDH8-201ENST00000338862 MED14OSP0DP75 135 aa10.41□□□□□ -0.74
PCDH8-201ENST00000338862 RPL35AP18077 110 aaKnown RBP10.41□□□□□ -0.74
PCDH8-201ENST00000338862 NBL1P41271 181 aa10.41□□□□□ -0.74
PCDH8-201ENST00000338862 STHQ8IWL8 128 aa10.41□□□□□ -0.74
PCDH8-201ENST00000338862 TMEM61Q8N0U2 210 aa10.41□□□□□ -0.74
PCDH8-201ENST00000338862 IGHV1-58A0A0C4DH39 117 aa10.4□□□□□ -0.74
PCDH8-201ENST00000338862 Q6ZSN1 163 aa10.4□□□□□ -0.74
PCDH8-201ENST00000338862 NXPH4O95158 308 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms