RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.75□□□□□ -0.21
RFTN1-201ENST00000334133 IGKV2-29A2NJV5 120 aaPredicted RBP13.75□□□□□ -0.21
RFTN1-201ENST00000334133 WFDC10AQ9H1F0 79 aa13.75□□□□□ -0.21
RFTN1-201ENST00000334133 A0A0J9YY99 117 aa13.74□□□□□ -0.21
RFTN1-201ENST00000334133 ADARB2-AS1A8MUL3 147 aa13.74□□□□□ -0.21
RFTN1-201ENST00000334133 PAPPA-AS1Q5QFB9 102 aa13.74□□□□□ -0.21
RFTN1-201ENST00000334133 C11orf72Q8NBR9 251 aa13.74□□□□□ -0.21
RFTN1-201ENST00000334133 J3QQQ9 107 aa13.74□□□□□ -0.21
RFTN1-201ENST00000334133 STHQ8IWL8 128 aa13.74□□□□□ -0.21
RFTN1-201ENST00000334133 A8MTW9 85 aa13.74□□□□□ -0.21
RFTN1-201ENST00000334133 INSP01308 110 aa13.74□□□□□ -0.21
RFTN1-201ENST00000334133 IGHV3-53P01767 116 aa13.74□□□□□ -0.21
RFTN1-201ENST00000334133 RPL24P83731 157 aaKnown RBP13.74□□□□□ -0.21
RFTN1-201ENST00000334133 OR5A1Q8NGJ0 315 aa13.74□□□□□ -0.21
RFTN1-201ENST00000334133 SPXQ9BT56 116 aa13.74□□□□□ -0.21
RFTN1-201ENST00000334133 PGPEP1Q9NXJ5 209 aa13.74□□□□□ -0.21
RFTN1-201ENST00000334133 FN1P02751 2386 aaKnown RBP13.73□□□□□ -0.21
RFTN1-201ENST00000334133 LINC01549A6NIU2 74 aa13.73□□□□□ -0.21
RFTN1-201ENST00000334133 A8MWV9 139 aa13.73□□□□□ -0.21
RFTN1-201ENST00000334133 ZNF22P17026 224 aaPredicted RBP13.72□□□□□ -0.21
RFTN1-201ENST00000334133 LGALS3P17931 250 aaKnown RBP13.72□□□□□ -0.21
RFTN1-201ENST00000334133 FAM104AQ969W3 186 aa13.72□□□□□ -0.21
RFTN1-201ENST00000334133 RRN3P1Q2M238 152 aa13.72□□□□□ -0.21
RFTN1-201ENST00000334133 K7ERU9 68 aa13.71□□□□□ -0.21
RFTN1-201ENST00000334133 WFDC2Q14508 124 aa13.71□□□□□ -0.21
RFTN1-201ENST00000334133 C1orf158Q8N1D5 194 aa13.71□□□□□ -0.22
RFTN1-201ENST00000334133 HIVEP2P31629 2446 aa13.7□□□□□ -0.22
RFTN1-201ENST00000334133 TRGV1A0A0A0MS02 117 aa13.7□□□□□ -0.22
RFTN1-201ENST00000334133 TRAV8-3A0A0A6YYJ7 113 aa13.7□□□□□ -0.22
RFTN1-201ENST00000334133 LINC01006Q8NI28 216 aa13.7□□□□□ -0.22
RFTN1-201ENST00000334133 AMELXQ99217 191 aa13.7□□□□□ -0.22
RFTN1-201ENST00000334133 SMR3AQ99954 134 aa13.7□□□□□ -0.22
RFTN1-201ENST00000334133 ANK3Q12955 4377 aaKnown RBP13.7□□□□□ -0.22
RFTN1-201ENST00000334133 TRAV2A0A0B4J234 112 aa13.7□□□□□ -0.22
RFTN1-201ENST00000334133 A8MZ25 164 aa13.7□□□□□ -0.22
RFTN1-201ENST00000334133 RHODO00212 210 aa13.7□□□□□ -0.22
RFTN1-201ENST00000334133 KRTAP1-1Q07627 177 aa13.7□□□□□ -0.22
RFTN1-201ENST00000334133 TMEM223A0PJW6 202 aa13.69□□□□□ -0.22
RFTN1-201ENST00000334133 NFE4Q86UQ8 179 aa13.69□□□□□ -0.22
RFTN1-201ENST00000334133 TMEM86BQ8N661 226 aa13.69□□□□□ -0.22
RFTN1-201ENST00000334133 LOC107984156A0A0G2JMH3 177 aa13.68□□□□□ -0.22
RFTN1-201ENST00000334133 ARL17AQ8IVW1 177 aa13.68□□□□□ -0.22
RFTN1-201ENST00000334133 LINC00467Q9BRT7 94 aa13.68□□□□□ -0.22
RFTN1-201ENST00000334133 GCN1Q92616 2671 aaKnown RBP13.68□□□□□ -0.22
RFTN1-201ENST00000334133 NBEAL2Q6ZNJ1 2754 aa13.68□□□□□ -0.22
RFTN1-201ENST00000334133 CHCHD7Q9BUK0 85 aa13.68□□□□□ -0.22
RFTN1-201ENST00000334133 TEX48A0A1B0GUV7 120 aa13.67□□□□□ -0.22
RFTN1-201ENST00000334133 A0A1B0GWB2 263 aa13.67□□□□□ -0.22
RFTN1-201ENST00000334133 FHL3Q13643 280 aa13.67□□□□□ -0.22
RFTN1-201ENST00000334133 RPL35AP18077 110 aaKnown RBP13.66□□□□□ -0.22
RFTN1-201ENST00000334133 Q6ZTI0 123 aa13.66□□□□□ -0.22
RFTN1-201ENST00000334133 SH2D6Q7Z4S9 175 aa13.66□□□□□ -0.22
RFTN1-201ENST00000334133 Q6ZUT4 128 aa13.66□□□□□ -0.22
RFTN1-201ENST00000334133 IGHV3-30P01768 117 aa13.65□□□□□ -0.22
RFTN1-201ENST00000334133 IGHV3-30-5P0DP03 117 aa13.65□□□□□ -0.22
RFTN1-201ENST00000334133 PLA2G2AP14555 144 aa13.65□□□□□ -0.22
RFTN1-201ENST00000334133 SLC25A29Q8N8R3 303 aa13.65□□□□□ -0.22
RFTN1-201ENST00000334133 TSPAN13O95857 204 aa13.65□□□□□ -0.22
RFTN1-201ENST00000334133 UBE2D1P51668 147 aa13.65□□□□□ -0.22
RFTN1-201ENST00000334133 TMEM238LA0A1B0GVL6 79 aa13.64□□□□□ -0.23
RFTN1-201ENST00000334133 A6NJY4 79 aa13.64□□□□□ -0.23
RFTN1-201ENST00000334133 LEPROTO15243 131 aa13.64□□□□□ -0.23
RFTN1-201ENST00000334133 VWFP04275 2813 aa13.64□□□□□ -0.23
RFTN1-201ENST00000334133 H7C2G1 150 aa13.64□□□□□ -0.23
RFTN1-201ENST00000334133 UBE2D4Q9Y2X8 147 aa13.64□□□□□ -0.23
RFTN1-201ENST00000334133 ETDBQ3ZM63 59 aa13.63□□□□□ -0.23
RFTN1-201ENST00000334133 C10orf126Q8N4M7 172 aa13.63□□□□□ -0.23
RFTN1-201ENST00000334133 SPINK8P0C7L1 97 aa13.63□□□□□ -0.23
RFTN1-201ENST00000334133 CFC1BP0CG36 223 aa13.63□□□□□ -0.23
RFTN1-201ENST00000334133 CFC1P0CG37 223 aa13.63□□□□□ -0.23
RFTN1-201ENST00000334133 IGHV3-30-3P0DP02 117 aa13.63□□□□□ -0.23
RFTN1-201ENST00000334133 COTL1Q14019 142 aa13.63□□□□□ -0.23
RFTN1-201ENST00000334133 TSSC4Q9Y5U2 329 aaPredicted RBP13.63□□□□□ -0.23
RFTN1-201ENST00000334133 NDUFA11Q86Y39 141 aa13.62□□□□□ -0.23
RFTN1-201ENST00000334133 NOP10Q9NPE3 64 aaKnown RBP13.62□□□□□ -0.23
RFTN1-201ENST00000334133 G3V4G9 280 aa13.62□□□□□ -0.23
RFTN1-201ENST00000334133 RS1O15537 224 aa13.62□□□□□ -0.23
RFTN1-201ENST00000334133 BEAN1Q3B7T3 259 aa13.62□□□□□ -0.23
RFTN1-201ENST00000334133 NDUFA7O95182 113 aa13.62□□□□□ -0.23
RFTN1-201ENST00000334133 PSMB2P49721 201 aa13.62□□□□□ -0.23
RFTN1-201ENST00000334133 TIMM21Q9BVV7 248 aa13.62□□□□□ -0.23
RFTN1-201ENST00000334133 NPC2P61916 151 aa13.61□□□□□ -0.23
RFTN1-201ENST00000334133 A4D1N5 150 aa13.61□□□□□ -0.23
RFTN1-201ENST00000334133 EDA2RQ9HAV5 297 aa13.61□□□□□ -0.23
RFTN1-201ENST00000334133 PYGO1Q9Y3Y4 419 aa13.61□□□□□ -0.23
RFTN1-201ENST00000334133 GAGE13Q4V321 117 aa13.6□□□□□ -0.23
RFTN1-201ENST00000334133 MUSTN1Q8IVN3 82 aa13.59□□□□□ -0.23
RFTN1-201ENST00000334133 TRAV25A0A0B4J276 109 aa13.59□□□□□ -0.23
RFTN1-201ENST00000334133 LINC00694P0DN24 101 aa13.59□□□□□ -0.23
RFTN1-201ENST00000334133 MRPS36P82909 103 aaKnown RBP13.59□□□□□ -0.23
RFTN1-201ENST00000334133 GIG44P09565 113 aaPredicted RBP13.59□□□□□ -0.23
RFTN1-201ENST00000334133 DGAT2L7PQ6IED9 249 aa13.59□□□□□ -0.23
RFTN1-201ENST00000334133 ZNF418Q8TF45 676 aaPredicted RBP13.59□□□□□ -0.23
RFTN1-201ENST00000334133 GAGE12JA6NER3 117 aa13.58□□□□□ -0.24
RFTN1-201ENST00000334133 EIF4EBP3O60516 100 aaPredicted RBP13.58□□□□□ -0.24
RFTN1-201ENST00000334133 PRSS2P07478 247 aa13.58□□□□□ -0.24
RFTN1-201ENST00000334133 GAGE4Q13068 117 aa13.58□□□□□ -0.24
RFTN1-201ENST00000334133 GAGE5Q13069 117 aa13.58□□□□□ -0.24
RFTN1-201ENST00000334133 OTOGQ6ZRI0 2925 aa13.58□□□□□ -0.24
RFTN1-201ENST00000334133 TEX29Q8N6K0 151 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms