RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 Q6ZTI0 123 aa13.17□□□□□ -0.3
LYSMD4-201ENST00000332728 SPXQ9BT56 116 aa13.17□□□□□ -0.3
LYSMD4-201ENST00000332728 SPATA3Q8NHX4 192 aa13.17□□□□□ -0.3
LYSMD4-201ENST00000332728 ZNF479Q96JC4 524 aa13.17□□□□□ -0.3
LYSMD4-201ENST00000332728 C20orf203Q8NBC4 194 aa13.16□□□□□ -0.3
LYSMD4-201ENST00000332728 C11orf72Q8NBR9 251 aa13.16□□□□□ -0.3
LYSMD4-201ENST00000332728 APOMO95445 188 aa13.16□□□□□ -0.3
LYSMD4-201ENST00000332728 NOP10Q9NPE3 64 aaKnown RBP13.15□□□□□ -0.3
LYSMD4-201ENST00000332728 TRBV6-5A0A0K0K1A5 114 aa13.15□□□□□ -0.3
LYSMD4-201ENST00000332728 E9PLD3 99 aa13.15□□□□□ -0.3
LYSMD4-201ENST00000332728 VCX2Q9H322 139 aa13.15□□□□□ -0.3
LYSMD4-201ENST00000332728 TSSC4Q9Y5U2 329 aaPredicted RBP13.15□□□□□ -0.3
LYSMD4-201ENST00000332728 TRAV8-3A0A0A6YYJ7 113 aa13.14□□□□□ -0.31
LYSMD4-201ENST00000332728 A0A1W2PPM0 123 aa13.14□□□□□ -0.31
LYSMD4-201ENST00000332728 C21orf62-AS1Q17RA5 79 aa13.14□□□□□ -0.31
LYSMD4-201ENST00000332728 IGLV4-3A0A075B6K6 122 aa13.14□□□□□ -0.31
LYSMD4-201ENST00000332728 NDUFA7O95182 113 aa13.13□□□□□ -0.31
LYSMD4-201ENST00000332728 C12orf74Q32Q52 190 aa13.13□□□□□ -0.31
LYSMD4-201ENST00000332728 TMEM86BQ8N661 226 aa13.13□□□□□ -0.31
LYSMD4-201ENST00000332728 LINC00467Q9BRT7 94 aa13.13□□□□□ -0.31
LYSMD4-201ENST00000332728 HIGD1BQ9P298 99 aa13.13□□□□□ -0.31
LYSMD4-201ENST00000332728 TRAV2A0A0B4J234 112 aa13.12□□□□□ -0.31
LYSMD4-201ENST00000332728 KRTAP10-3P60369 221 aa13.12□□□□□ -0.31
LYSMD4-201ENST00000332728 NPC2P61916 151 aa13.12□□□□□ -0.31
LYSMD4-201ENST00000332728 FHL3Q13643 280 aa13.12□□□□□ -0.31
LYSMD4-201ENST00000332728 TIMM17AQ99595 171 aa13.12□□□□□ -0.31
LYSMD4-201ENST00000332728 FABP2P12104 132 aa13.11□□□□□ -0.31
LYSMD4-201ENST00000332728 ZNF418Q8TF45 676 aaPredicted RBP13.11□□□□□ -0.31
LYSMD4-201ENST00000332728 TRBV7-3A0A075B6L6 115 aa13.11□□□□□ -0.31
LYSMD4-201ENST00000332728 A8MWV9 139 aa13.11□□□□□ -0.31
LYSMD4-201ENST00000332728 GAGE7O76087 117 aa13.11□□□□□ -0.31
LYSMD4-201ENST00000332728 LY6G6DO95868 133 aa13.11□□□□□ -0.31
LYSMD4-201ENST00000332728 GAGE12FP0CL80 117 aa13.11□□□□□ -0.31
LYSMD4-201ENST00000332728 GAGE12GP0CL81 117 aa13.11□□□□□ -0.31
LYSMD4-201ENST00000332728 GAGE12IP0CL82 117 aa13.11□□□□□ -0.31
LYSMD4-201ENST00000332728 TMEM141Q96I45 108 aa13.11□□□□□ -0.31
LYSMD4-201ENST00000332728 LOC100131303A0A0U1RQF7 123 aa13.1□□□□□ -0.31
LYSMD4-201ENST00000332728 INAFM1C9JVW0 142 aa13.1□□□□□ -0.31
LYSMD4-201ENST00000332728 GAGE12JA6NER3 117 aa13.1□□□□□ -0.31
LYSMD4-201ENST00000332728 H7C2G1 150 aa13.1□□□□□ -0.31
LYSMD4-201ENST00000332728 GAGE4Q13068 117 aa13.1□□□□□ -0.31
LYSMD4-201ENST00000332728 GAGE5Q13069 117 aa13.1□□□□□ -0.31
LYSMD4-201ENST00000332728 GAGE13Q4V321 117 aa13.1□□□□□ -0.31
LYSMD4-201ENST00000332728 Q6ZUT4 128 aa13.1□□□□□ -0.31
LYSMD4-201ENST00000332728 RNASE1P07998 156 aaKnown RBP13.09□□□□□ -0.31
LYSMD4-201ENST00000332728 HERVK_113P61574 105 aa13.09□□□□□ -0.31
LYSMD4-201ENST00000332728 FAM104AQ969W3 186 aa13.09□□□□□ -0.31
LYSMD4-201ENST00000332728 K7EP34 96 aa13.09□□□□□ -0.31
LYSMD4-201ENST00000332728 UFSP1Q6NVU6 142 aa13.09□□□□□ -0.31
LYSMD4-201ENST00000332728 TM2D2Q9BX73 214 aa13.09□□□□□ -0.31
LYSMD4-201ENST00000332728 F8P00451 2351 aa13.09□□□□□ -0.31
LYSMD4-201ENST00000332728 J3QQQ9 107 aa13.08□□□□□ -0.31
LYSMD4-201ENST00000332728 LGALS3P17931 250 aaKnown RBP13.08□□□□□ -0.31
LYSMD4-201ENST00000332728 IGLL5B9A064 214 aa13.08□□□□□ -0.32
LYSMD4-201ENST00000332728 ZNF22P17026 224 aaPredicted RBP13.08□□□□□ -0.32
LYSMD4-201ENST00000332728 RPL32P62910 135 aaKnown RBP13.08□□□□□ -0.32
LYSMD4-201ENST00000332728 H3BMG7 143 aa13.08□□□□□ -0.32
LYSMD4-201ENST00000332728 GIG44P09565 113 aaPredicted RBP13.08□□□□□ -0.32
LYSMD4-201ENST00000332728 SPINK8P0C7L1 97 aa13.08□□□□□ -0.32
LYSMD4-201ENST00000332728 IGKV3OR2-268A0A0C4DH90 116 aa13.07□□□□□ -0.32
LYSMD4-201ENST00000332728 RHOHQ15669 191 aa13.07□□□□□ -0.32
LYSMD4-201ENST00000332728 GTF2H5Q6ZYL4 71 aa13.07□□□□□ -0.32
LYSMD4-201ENST00000332728 A0A0U1RRA0 63 aa13.07□□□□□ -0.32
LYSMD4-201ENST00000332728 LINC01549A6NIU2 74 aa13.07□□□□□ -0.32
LYSMD4-201ENST00000332728 LINC00694P0DN24 101 aa13.07□□□□□ -0.32
LYSMD4-201ENST00000332728 CHCHD7Q9BUK0 85 aa13.07□□□□□ -0.32
LYSMD4-201ENST00000332728 PGPEP1Q9NXJ5 209 aa13.07□□□□□ -0.32
LYSMD4-201ENST00000332728 A8MTW9 85 aa13.06□□□□□ -0.32
LYSMD4-201ENST00000332728 TRGV2A0A075B6R0 118 aa13.06□□□□□ -0.32
LYSMD4-201ENST00000332728 PF4P02776 101 aa13.06□□□□□ -0.32
LYSMD4-201ENST00000332728 A0A0J9YY99 117 aa13.05□□□□□ -0.32
LYSMD4-201ENST00000332728 LOC107984156A0A0G2JMH3 177 aa13.05□□□□□ -0.32
LYSMD4-201ENST00000332728 RHODO00212 210 aa13.05□□□□□ -0.32
LYSMD4-201ENST00000332728 RPL24P83731 157 aaKnown RBP13.05□□□□□ -0.32
LYSMD4-201ENST00000332728 COTL1Q14019 142 aa13.05□□□□□ -0.32
LYSMD4-201ENST00000332728 OCIAD2Q56VL3 154 aa13.05□□□□□ -0.32
LYSMD4-201ENST00000332728 ARL17AQ8IVW1 177 aa13.05□□□□□ -0.32
LYSMD4-201ENST00000332728 HILS1P60008 231 aa13.04□□□□□ -0.32
LYSMD4-201ENST00000332728 STAB1Q9NY15 2570 aa13.04□□□□□ -0.32
LYSMD4-201ENST00000332728 DEFB4AO15263 64 aa13.04□□□□□ -0.32
LYSMD4-201ENST00000332728 DGAT2L7PQ6IED9 249 aa13.04□□□□□ -0.32
LYSMD4-201ENST00000332728 LINC00482Q8N8I6 264 aa13.04□□□□□ -0.32
LYSMD4-201ENST00000332728 RBX1P62877 108 aa13.03□□□□□ -0.32
LYSMD4-201ENST00000332728 ZNF625Q96I27 306 aaPredicted RBP13.03□□□□□ -0.32
LYSMD4-201ENST00000332728 PKD1L1Q8TDX9 2849 aa13.03□□□□□ -0.32
LYSMD4-201ENST00000332728 DEFB130BP0DP73 79 aa13.03□□□□□ -0.32
LYSMD4-201ENST00000332728 DEFB130AP0DP74 79 aa13.03□□□□□ -0.32
LYSMD4-201ENST00000332728 SLC25A29Q8N8R3 303 aa13.03□□□□□ -0.32
LYSMD4-201ENST00000332728 DAND5Q8N907 189 aa13.03□□□□□ -0.32
LYSMD4-201ENST00000332728 VPS25Q9BRG1 176 aa13.03□□□□□ -0.32
LYSMD4-201ENST00000332728 TRAV13-1A0A0B4J241 112 aa13.02□□□□□ -0.33
LYSMD4-201ENST00000332728 TMEM223A0PJW6 202 aa13.02□□□□□ -0.33
LYSMD4-201ENST00000332728 UBE2D4Q9Y2X8 147 aa13.02□□□□□ -0.33
LYSMD4-201ENST00000332728 RS1O15537 224 aa13.01□□□□□ -0.33
LYSMD4-201ENST00000332728 PRSS2P07478 247 aa13.01□□□□□ -0.33
LYSMD4-201ENST00000332728 WFDC2Q14508 124 aa13.01□□□□□ -0.33
LYSMD4-201ENST00000332728 AMELXQ99217 191 aa13.01□□□□□ -0.33
LYSMD4-201ENST00000332728 TEX29Q8N6K0 151 aa13.01□□□□□ -0.33
LYSMD4-201ENST00000332728 IGLV1-51P01701 117 aa13□□□□□ -0.33
LYSMD4-201ENST00000332728 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms