RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 SLC25A29Q8N8R3 303 aa14□□□□□ -0.17
LAMP1-201ENST00000332556 IGHV1OR15-1A0A075B7D0 117 aa14□□□□□ -0.17
LAMP1-201ENST00000332556 C10orf126Q8N4M7 172 aa14□□□□□ -0.17
LAMP1-201ENST00000332556 ANKRD29Q8N6D5 301 aa14□□□□□ -0.17
LAMP1-201ENST00000332556 AMELXQ99217 191 aa14□□□□□ -0.17
LAMP1-201ENST00000332556 ZNF580Q9UK33 172 aa14□□□□□ -0.17
LAMP1-201ENST00000332556 J3QLI3 93 aa13.99□□□□□ -0.17
LAMP1-201ENST00000332556 CRYBA4P53673 196 aa13.99□□□□□ -0.17
LAMP1-201ENST00000332556 TMEM61Q8N0U2 210 aa13.99□□□□□ -0.17
LAMP1-201ENST00000332556 PPDPFLQ8WWR9 84 aa13.99□□□□□ -0.17
LAMP1-201ENST00000332556 SETXQ7Z333 2677 aaKnown RBP13.99□□□□□ -0.17
LAMP1-201ENST00000332556 LGALS3P17931 250 aaKnown RBP13.99□□□□□ -0.17
LAMP1-201ENST00000332556 TRPT1Q86TN4 253 aaKnown RBP13.99□□□□□ -0.17
LAMP1-201ENST00000332556 POM121L12Q8N7R1 296 aa13.99□□□□□ -0.17
LAMP1-201ENST00000332556 UBE2E2Q96LR5 201 aa13.99□□□□□ -0.17
LAMP1-201ENST00000332556 RBMY1BA6NDE4 496 aaKnown RBP13.98□□□□□ -0.17
LAMP1-201ENST00000332556 RBMY1EA6NEQ0 496 aaKnown RBP13.98□□□□□ -0.17
LAMP1-201ENST00000332556 EIF4EBP3O60516 100 aaPredicted RBP13.98□□□□□ -0.17
LAMP1-201ENST00000332556 NXPH4O95158 308 aa13.98□□□□□ -0.17
LAMP1-201ENST00000332556 FSHBP01225 129 aa13.98□□□□□ -0.17
LAMP1-201ENST00000332556 RBMY1DP0C7P1 496 aaKnown RBP13.98□□□□□ -0.17
LAMP1-201ENST00000332556 A4D1N5 150 aa13.98□□□□□ -0.17
LAMP1-201ENST00000332556 A8MWV9 139 aa13.98□□□□□ -0.17
LAMP1-201ENST00000332556 PAPPA-AS1Q5QFB9 102 aa13.98□□□□□ -0.17
LAMP1-201ENST00000332556 PRO1854Q9UHT4 67 aa13.98□□□□□ -0.17
LAMP1-201ENST00000332556 TRAV2A0A0B4J234 112 aa13.98□□□□□ -0.17
LAMP1-201ENST00000332556 ELANEP08246 267 aa13.98□□□□□ -0.17
LAMP1-201ENST00000332556 C9orf85Q96MD7 179 aa13.97□□□□□ -0.17
LAMP1-201ENST00000332556 TMEM141Q96I45 108 aa13.97□□□□□ -0.17
LAMP1-201ENST00000332556 TIMM17AQ99595 171 aa13.97□□□□□ -0.17
LAMP1-201ENST00000332556 LYRM7Q5U5X0 104 aa13.96□□□□□ -0.17
LAMP1-201ENST00000332556 KRTAP1-3Q8IUG1 177 aa13.96□□□□□ -0.17
LAMP1-201ENST00000332556 HELZ2Q9BYK8 2649 aaKnown RBP13.96□□□□□ -0.17
LAMP1-201ENST00000332556 RNASE13Q5GAN3 156 aaKnown RBP13.96□□□□□ -0.18
LAMP1-201ENST00000332556 ADARB2-AS1A8MUL3 147 aa13.95□□□□□ -0.18
LAMP1-201ENST00000332556 C9JAW5 83 aa13.95□□□□□ -0.18
LAMP1-201ENST00000332556 TRBV7-9A0A0J9YWB2 115 aa13.95□□□□□ -0.18
LAMP1-201ENST00000332556 M0QY20 66 aa13.95□□□□□ -0.18
LAMP1-201ENST00000332556 CEMP1Q6PRD7 247 aaPredicted RBP13.94□□□□□ -0.18
LAMP1-201ENST00000332556 TRBV20-1A0A075B6N2 111 aa13.94□□□□□ -0.18
LAMP1-201ENST00000332556 IGHV3OR16-12A0A075B7B8 117 aa13.94□□□□□ -0.18
LAMP1-201ENST00000332556 TRBV27A0A0K0K1C4 114 aa13.94□□□□□ -0.18
LAMP1-201ENST00000332556 NOTCH2Q04721 2471 aa13.93□□□□□ -0.18
LAMP1-201ENST00000332556 RPL32P62910 135 aaKnown RBP13.93□□□□□ -0.18
LAMP1-201ENST00000332556 MUSTN1Q8IVN3 82 aa13.93□□□□□ -0.18
LAMP1-201ENST00000332556 PDZD2O15018 2839 aa13.93□□□□□ -0.18
LAMP1-201ENST00000332556 A0A0J9YXV3 536 aa13.92□□□□□ -0.18
LAMP1-201ENST00000332556 SLC25A20O43772 301 aa13.92□□□□□ -0.18
LAMP1-201ENST00000332556 LGALS9O00182 355 aa13.92□□□□□ -0.18
LAMP1-201ENST00000332556 Q1RN00 199 aa13.91□□□□□ -0.18
LAMP1-201ENST00000332556 IGHV3-33P01772 117 aa13.91□□□□□ -0.18
LAMP1-201ENST00000332556 Q6ZSN1 163 aa13.91□□□□□ -0.18
LAMP1-201ENST00000332556 SBSPONQ8IVN8 264 aa13.91□□□□□ -0.18
LAMP1-201ENST00000332556 TMEM223A0PJW6 202 aa13.9□□□□□ -0.18
LAMP1-201ENST00000332556 DYNLRB2Q8TF09 96 aa13.9□□□□□ -0.18
LAMP1-201ENST00000332556 RNF183Q96D59 192 aa13.9□□□□□ -0.18
LAMP1-201ENST00000332556 H3BMM0 161 aa13.9□□□□□ -0.18
LAMP1-201ENST00000332556 ZNF22P17026 224 aaPredicted RBP13.9□□□□□ -0.18
LAMP1-201ENST00000332556 TMEM263Q8WUH6 116 aaKnown RBP13.9□□□□□ -0.18
LAMP1-201ENST00000332556 IGHV3-38A0A0C4DH36 116 aa13.89□□□□□ -0.19
LAMP1-201ENST00000332556 Q6ZSV7 163 aa13.89□□□□□ -0.19
LAMP1-201ENST00000332556 FASNP49327 2511 aaKnown RBP13.89□□□□□ -0.19
LAMP1-201ENST00000332556 TMEM89A2RUT3 159 aa13.89□□□□□ -0.19
LAMP1-201ENST00000332556 ESM1Q9NQ30 184 aa13.89□□□□□ -0.19
LAMP1-201ENST00000332556 ERG28Q9UKR5 140 aa13.89□□□□□ -0.19
LAMP1-201ENST00000332556 SPXQ9BT56 116 aa13.88□□□□□ -0.19
LAMP1-201ENST00000332556 XCL2Q9UBD3 114 aa13.88□□□□□ -0.19
LAMP1-201ENST00000332556 RHODO00212 210 aa13.88□□□□□ -0.19
LAMP1-201ENST00000332556 LEPROTO15243 131 aa13.88□□□□□ -0.19
LAMP1-201ENST00000332556 TRBV6-5A0A0K0K1A5 114 aa13.87□□□□□ -0.19
LAMP1-201ENST00000332556 MAP6D1Q9H9H5 199 aa13.87□□□□□ -0.19
LAMP1-201ENST00000332556 HECTD1Q9ULT8 2610 aa13.87□□□□□ -0.19
LAMP1-201ENST00000332556 LINC01587Q99440 93 aa13.87□□□□□ -0.19
LAMP1-201ENST00000332556 DNAJC9-AS1A6NH13 148 aa13.86□□□□□ -0.19
LAMP1-201ENST00000332556 NPC2P61916 151 aa13.86□□□□□ -0.19
LAMP1-201ENST00000332556 NTN5Q8WTR8 489 aaPredicted RBP13.86□□□□□ -0.19
LAMP1-201ENST00000332556 TRAV8-3A0A0A6YYJ7 113 aa13.86□□□□□ -0.19
LAMP1-201ENST00000332556 C20orf203Q8NBC4 194 aa13.86□□□□□ -0.19
LAMP1-201ENST00000332556 VCX2Q9H322 139 aa13.86□□□□□ -0.19
LAMP1-201ENST00000332556 IGLV4-3A0A075B6K6 122 aa13.85□□□□□ -0.19
LAMP1-201ENST00000332556 CD28P10747 220 aa13.85□□□□□ -0.19
LAMP1-201ENST00000332556 ODF3Q96PU9 254 aa13.85□□□□□ -0.19
LAMP1-201ENST00000332556 PRSS2P07478 247 aa13.85□□□□□ -0.19
LAMP1-201ENST00000332556 NSUN5P1Q3KNT7 163 aa13.85□□□□□ -0.19
LAMP1-201ENST00000332556 A8MZ25 164 aa13.84□□□□□ -0.19
LAMP1-201ENST00000332556 RNF152Q8N8N0 203 aa13.84□□□□□ -0.19
LAMP1-201ENST00000332556 A0A0J9YXY3 114 aa13.84□□□□□ -0.19
LAMP1-201ENST00000332556 WFDC10AQ9H1F0 79 aa13.84□□□□□ -0.19
LAMP1-201ENST00000332556 ANK3Q12955 4377 aaKnown RBP13.83□□□□□ -0.19
LAMP1-201ENST00000332556 DEFB114Q30KQ6 69 aa13.83□□□□□ -0.2
LAMP1-201ENST00000332556 ANAPC13Q9BS18 74 aa13.83□□□□□ -0.2
LAMP1-201ENST00000332556 NBEAL2Q6ZNJ1 2754 aa13.83□□□□□ -0.2
LAMP1-201ENST00000332556 TEX49A0A1B0GTD5 131 aa13.83□□□□□ -0.2
LAMP1-201ENST00000332556 C4orf3Q8WVX3 66 aa13.83□□□□□ -0.2
LAMP1-201ENST00000332556 TRGV11A0A075B6L2 103 aa13.82□□□□□ -0.2
LAMP1-201ENST00000332556 I3L3M4 83 aa13.82□□□□□ -0.2
LAMP1-201ENST00000332556 IGHV3-30-3P0DP02 117 aa13.82□□□□□ -0.2
LAMP1-201ENST00000332556 RHOHQ15669 191 aa13.82□□□□□ -0.2
LAMP1-201ENST00000332556 CRLF1O75462 422 aa13.82□□□□□ -0.2
LAMP1-201ENST00000332556 ZFAND6Q6FIF0 208 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms