RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 A0A0J9YX75 114 aa10.68□□□□□ -0.7
SNX20-202ENST00000330943 TRBV30A0A0K0K1B3 111 aa10.68□□□□□ -0.7
SNX20-202ENST00000330943 ODF3Q96PU9 254 aa10.68□□□□□ -0.7
SNX20-202ENST00000330943 TIMM21Q9BVV7 248 aa10.68□□□□□ -0.7
SNX20-202ENST00000330943 ACANP16112 2415 aa10.68□□□□□ -0.7
SNX20-202ENST00000330943 I3L3M4 83 aa10.68□□□□□ -0.7
SNX20-202ENST00000330943 IFITM1P13164 125 aa10.68□□□□□ -0.7
SNX20-202ENST00000330943 RPL13AP40429 203 aaKnown RBP10.68□□□□□ -0.7
SNX20-202ENST00000330943 C15orf53Q8NAA6 179 aa10.68□□□□□ -0.7
SNX20-202ENST00000330943 DCANP1Q8TF63 244 aa10.68□□□□□ -0.7
SNX20-202ENST00000330943 TRAV8-3A0A0A6YYJ7 113 aa10.68□□□□□ -0.7
SNX20-202ENST00000330943 NPC2P61916 151 aa10.68□□□□□ -0.7
SNX20-202ENST00000330943 C2orf82Q6UX34 121 aa10.68□□□□□ -0.7
SNX20-202ENST00000330943 CCDC179H3BU77 68 aa10.67□□□□□ -0.7
SNX20-202ENST00000330943 NRGNQ92686 78 aa10.67□□□□□ -0.7
SNX20-202ENST00000330943 ZNF469Q96JG9 3925 aaPredicted RBP10.67□□□□□ -0.7
SNX20-202ENST00000330943 CD28P10747 220 aa10.67□□□□□ -0.7
SNX20-202ENST00000330943 LITAFQ99732 161 aa10.67□□□□□ -0.7
SNX20-202ENST00000330943 ICOSQ9Y6W8 199 aa10.67□□□□□ -0.7
SNX20-202ENST00000330943 MTORP42345 2549 aa10.67□□□□□ -0.7
SNX20-202ENST00000330943 PRRC2AP48634 2157 aaKnown RBP10.67□□□□□ -0.7
SNX20-202ENST00000330943 BLCAPP62952 87 aa10.66□□□□□ -0.7
SNX20-202ENST00000330943 RNASE13Q5GAN3 156 aaKnown RBP10.66□□□□□ -0.7
SNX20-202ENST00000330943 GAGE12JA6NER3 117 aa10.66□□□□□ -0.7
SNX20-202ENST00000330943 GAGE7O76087 117 aa10.66□□□□□ -0.7
SNX20-202ENST00000330943 IGHG2P01859 326 aa10.66□□□□□ -0.7
SNX20-202ENST00000330943 GAGE12FP0CL80 117 aa10.66□□□□□ -0.7
SNX20-202ENST00000330943 GAGE12GP0CL81 117 aa10.66□□□□□ -0.7
SNX20-202ENST00000330943 GAGE12IP0CL82 117 aa10.66□□□□□ -0.7
SNX20-202ENST00000330943 GAGE4Q13068 117 aa10.66□□□□□ -0.7
SNX20-202ENST00000330943 Q6ZSV7 163 aa10.66□□□□□ -0.7
SNX20-202ENST00000330943 CHD6Q8TD26 2715 aa10.65□□□□□ -0.7
SNX20-202ENST00000330943 H3BUA1 57 aa10.65□□□□□ -0.7
SNX20-202ENST00000330943 SPINK13Q1W4C9 94 aa10.65□□□□□ -0.7
SNX20-202ENST00000330943 ADAMTSL4-AS1Q5T5F5 129 aa10.65□□□□□ -0.7
SNX20-202ENST00000330943 CEMP1Q6PRD7 247 aaPredicted RBP10.65□□□□□ -0.7
SNX20-202ENST00000330943 H3BUX3 64 aa10.65□□□□□ -0.7
SNX20-202ENST00000330943 H7C423 109 aa10.65□□□□□ -0.7
SNX20-202ENST00000330943 IGHV1OR15-1A0A075B7D0 117 aa10.64□□□□□ -0.71
SNX20-202ENST00000330943 CLEC2BQ92478 149 aa10.64□□□□□ -0.71
SNX20-202ENST00000330943 UCNP55089 124 aa10.64□□□□□ -0.71
SNX20-202ENST00000330943 NDUFA12Q9UI09 145 aa10.64□□□□□ -0.71
SNX20-202ENST00000330943 IGHV3-73A0A0B4J1V6 119 aa10.64□□□□□ -0.71
SNX20-202ENST00000330943 PRB1P04280 392 aa10.64□□□□□ -0.71
SNX20-202ENST00000330943 Q6Q795 121 aa10.64□□□□□ -0.71
SNX20-202ENST00000330943 A8MZ25 164 aa10.63□□□□□ -0.71
SNX20-202ENST00000330943 LINC01600Q96MT4 127 aa10.63□□□□□ -0.71
SNX20-202ENST00000330943 WNK1Q9H4A3 2382 aa10.63□□□□□ -0.71
SNX20-202ENST00000330943 COX6CP09669 75 aa10.63□□□□□ -0.71
SNX20-202ENST00000330943 IGHV4-38-2P0DP08 117 aa10.63□□□□□ -0.71
SNX20-202ENST00000330943 BRI3O95415 125 aa10.62□□□□□ -0.71
SNX20-202ENST00000330943 NIPBLQ6KC79 2804 aaeCLIP10.62□□□□□ -0.71
SNX20-202ENST00000330943 MRPS36P82909 103 aaKnown RBP10.62□□□□□ -0.71
SNX20-202ENST00000330943 IGHV1-58A0A0C4DH39 117 aa10.61□□□□□ -0.71
SNX20-202ENST00000330943 FAM104AQ969W3 186 aa10.61□□□□□ -0.71
SNX20-202ENST00000330943 K7EMT4 169 aa10.61□□□□□ -0.71
SNX20-202ENST00000330943 IGLV1-40P01703 118 aa10.61□□□□□ -0.71
SNX20-202ENST00000330943 HTN1P15515 57 aa10.61□□□□□ -0.71
SNX20-202ENST00000330943 MIAQ16674 131 aa10.61□□□□□ -0.71
SNX20-202ENST00000330943 SPANXDQ9BXN6 97 aa10.61□□□□□ -0.71
SNX20-202ENST00000330943 SPANXCQ9NY87 97 aa10.61□□□□□ -0.71
SNX20-202ENST00000330943 H3BT86 120 aa10.61□□□□□ -0.71
SNX20-202ENST00000330943 PROK1P58294 105 aa10.61□□□□□ -0.71
SNX20-202ENST00000330943 SNRPD3P62318 126 aaKnown RBP10.61□□□□□ -0.71
SNX20-202ENST00000330943 DUX3Q96PT4 197 aa10.61□□□□□ -0.71
SNX20-202ENST00000330943 TMEM95Q3KNT9 176 aa10.6□□□□□ -0.71
SNX20-202ENST00000330943 PYGO1Q9Y3Y4 419 aa10.6□□□□□ -0.71
SNX20-202ENST00000330943 A6NDX4 124 aa10.59□□□□□ -0.71
SNX20-202ENST00000330943 DAND5Q8N907 189 aa10.59□□□□□ -0.71
SNX20-202ENST00000330943 MAPK1IP1LQ8NDC0 245 aa10.59□□□□□ -0.71
SNX20-202ENST00000330943 VSIG2Q96IQ7 327 aa10.59□□□□□ -0.71
SNX20-202ENST00000330943 TMEM61Q8N0U2 210 aa10.58□□□□□ -0.72
SNX20-202ENST00000330943 LST1O00453 97 aa10.58□□□□□ -0.72
SNX20-202ENST00000330943 TNFRSF18Q9Y5U5 241 aa10.57□□□□□ -0.72
SNX20-202ENST00000330943 TRGV11A0A075B6L2 103 aa10.57□□□□□ -0.72
SNX20-202ENST00000330943 KNCNA6PVL3 124 aa10.57□□□□□ -0.72
SNX20-202ENST00000330943 Q9UF83 564 aa10.57□□□□□ -0.72
SNX20-202ENST00000330943 IGHV4-61A0A0C4DH41 118 aa10.56□□□□□ -0.72
SNX20-202ENST00000330943 K7EQG2 157 aa10.56□□□□□ -0.72
SNX20-202ENST00000330943 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.56□□□□□ -0.72
SNX20-202ENST00000330943 TINCRA0A1B0GVN0 87 aa10.56□□□□□ -0.72
SNX20-202ENST00000330943 IGKV2-29A2NJV5 120 aaPredicted RBP10.56□□□□□ -0.72
SNX20-202ENST00000330943 CFHR3Q02985 330 aa10.55□□□□□ -0.72
SNX20-202ENST00000330943 C10orf99Q6UWK7 81 aa10.55□□□□□ -0.72
SNX20-202ENST00000330943 YAE1D1Q9NRH1 226 aa10.55□□□□□ -0.72
SNX20-202ENST00000330943 MRPL23Q16540 153 aaKnown RBP10.55□□□□□ -0.72
SNX20-202ENST00000330943 SMIM20Q8N5G0 67 aa10.55□□□□□ -0.72
SNX20-202ENST00000330943 ITPR2Q14571 2701 aa10.55□□□□□ -0.72
SNX20-202ENST00000330943 RBMY1A1P0DJD3 496 aaKnown RBP10.54□□□□□ -0.72
SNX20-202ENST00000330943 RBMY1CP0DJD4 496 aa10.54□□□□□ -0.72
SNX20-202ENST00000330943 RBMY1FQ15415 496 aaKnown RBP10.54□□□□□ -0.72
SNX20-202ENST00000330943 APCP25054 2843 aa10.54□□□□□ -0.72
SNX20-202ENST00000330943 FAM240AA0A1B0GVK7 77 aa10.54□□□□□ -0.72
SNX20-202ENST00000330943 PRM2P04554 102 aa10.54□□□□□ -0.72
SNX20-202ENST00000330943 MEIG1Q5JSS6 88 aa10.54□□□□□ -0.72
SNX20-202ENST00000330943 SHISA2Q6UWI4 295 aa10.54□□□□□ -0.72
SNX20-202ENST00000330943 CHCHD5Q9BSY4 110 aa10.54□□□□□ -0.72
SNX20-202ENST00000330943 HELZ2Q9BYK8 2649 aaKnown RBP10.54□□□□□ -0.72
SNX20-202ENST00000330943 UBE2D4Q9Y2X8 147 aa10.54□□□□□ -0.72
SNX20-202ENST00000330943 CHCHD7Q9BUK0 85 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms