RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 TRBV6-5A0A0K0K1A5 114 aa13.45□□□□□ -0.26
SOCS3-201ENST00000330871 M0QY20 66 aa13.45□□□□□ -0.26
SOCS3-201ENST00000330871 FAM19A4Q96LR4 140 aa13.45□□□□□ -0.26
SOCS3-201ENST00000330871 CD28P10747 220 aa13.44□□□□□ -0.26
SOCS3-201ENST00000330871 NACAE9PAV3 2078 aa13.44□□□□□ -0.26
SOCS3-201ENST00000330871 IGHV1-58A0A0C4DH39 117 aa13.44□□□□□ -0.26
SOCS3-201ENST00000330871 CITED2Q99967 270 aaPredicted RBP13.44□□□□□ -0.26
SOCS3-201ENST00000330871 A0A0U1RRA0 63 aa13.43□□□□□ -0.26
SOCS3-201ENST00000330871 CCL21O00585 134 aa13.43□□□□□ -0.26
SOCS3-201ENST00000330871 SOCS3O14543 225 aa13.43□□□□□ -0.26
SOCS3-201ENST00000330871 ZNF292O60281 2723 aa13.43□□□□□ -0.26
SOCS3-201ENST00000330871 TRBV12-3P01733 135 aa13.43□□□□□ -0.26
SOCS3-201ENST00000330871 SAA4P35542 130 aa13.43□□□□□ -0.26
SOCS3-201ENST00000330871 NBL1P41271 181 aa13.42□□□□□ -0.26
SOCS3-201ENST00000330871 TMEM219Q86XT9 240 aa13.42□□□□□ -0.26
SOCS3-201ENST00000330871 OR13C6PQ8NH95 151 aa13.42□□□□□ -0.26
SOCS3-201ENST00000330871 C5orf38Q86SI9 138 aa13.42□□□□□ -0.26
SOCS3-201ENST00000330871 CEP295Q9C0D2 2601 aa13.42□□□□□ -0.26
SOCS3-201ENST00000330871 TLN1Q9Y490 2541 aaKnown RBP13.41□□□□□ -0.26
SOCS3-201ENST00000330871 CRYGAP11844 174 aa13.41□□□□□ -0.26
SOCS3-201ENST00000330871 CDSNQ15517 529 aa13.41□□□□□ -0.26
SOCS3-201ENST00000330871 TRAV13-1A0A0B4J241 112 aa13.41□□□□□ -0.26
SOCS3-201ENST00000330871 FAM104AQ969W3 186 aa13.41□□□□□ -0.26
SOCS3-201ENST00000330871 TRAV25A0A0B4J276 109 aa13.4□□□□□ -0.26
SOCS3-201ENST00000330871 ATP5G1P05496 136 aa13.4□□□□□ -0.26
SOCS3-201ENST00000330871 TIRAPP58753 221 aa13.4□□□□□ -0.26
SOCS3-201ENST00000330871 VSIG2Q96IQ7 327 aa13.4□□□□□ -0.26
SOCS3-201ENST00000330871 MRPS36P82909 103 aaKnown RBP13.4□□□□□ -0.27
SOCS3-201ENST00000330871 KLRB1Q12918 225 aa13.4□□□□□ -0.27
SOCS3-201ENST00000330871 APRG1Q8IVJ8 170 aa13.4□□□□□ -0.27
SOCS3-201ENST00000330871 C5orf56Q8N8D9 126 aa13.4□□□□□ -0.27
SOCS3-201ENST00000330871 HRNRQ86YZ3 2850 aaPredicted RBP13.39□□□□□ -0.27
SOCS3-201ENST00000330871 Q8N2B8 174 aa13.39□□□□□ -0.27
SOCS3-201ENST00000330871 FAM223BA6NKX1 122 aa13.39□□□□□ -0.27
SOCS3-201ENST00000330871 K7ENP7 123 aa13.39□□□□□ -0.27
SOCS3-201ENST00000330871 SDIM1Q6ZPB5 146 aa13.39□□□□□ -0.27
SOCS3-201ENST00000330871 FAM223AQ8IWN6 122 aa13.39□□□□□ -0.27
SOCS3-201ENST00000330871 TRACP01848 142 aa13.38□□□□□ -0.27
SOCS3-201ENST00000330871 BAALC-AS2P0C853 105 aa13.38□□□□□ -0.27
SOCS3-201ENST00000330871 PF4V1P10720 104 aa13.38□□□□□ -0.27
SOCS3-201ENST00000330871 ZNF625Q96I27 306 aaPredicted RBP13.38□□□□□ -0.27
SOCS3-201ENST00000330871 DSCR8Q96T75 97 aa13.38□□□□□ -0.27
SOCS3-201ENST00000330871 TRAV12-2A0A075B6T6 113 aa13.37□□□□□ -0.27
SOCS3-201ENST00000330871 COX7A2LO14548 114 aa13.37□□□□□ -0.27
SOCS3-201ENST00000330871 OXTP01178 125 aa13.37□□□□□ -0.27
SOCS3-201ENST00000330871 IGKV3-20P01619 116 aa13.37□□□□□ -0.27
SOCS3-201ENST00000330871 CSMD2Q7Z408 3487 aa13.37□□□□□ -0.27
SOCS3-201ENST00000330871 CXCL5P42830 114 aa13.37□□□□□ -0.27
SOCS3-201ENST00000330871 RPS28P62857 69 aaKnown RBP13.37□□□□□ -0.27
SOCS3-201ENST00000330871 PEMTQ9UBM1 199 aa13.37□□□□□ -0.27
SOCS3-201ENST00000330871 IGHV3-73A0A0B4J1V6 119 aa13.36□□□□□ -0.27
SOCS3-201ENST00000330871 C4orf26Q17RF5 130 aa13.36□□□□□ -0.27
SOCS3-201ENST00000330871 C22orf24Q9Y442 160 aa13.36□□□□□ -0.27
SOCS3-201ENST00000330871 KLLNB2CW77 178 aa13.36□□□□□ -0.27
SOCS3-201ENST00000330871 ADORA2A-AS1P86434 159 aa13.36□□□□□ -0.27
SOCS3-201ENST00000330871 DPH3Q96FX2 82 aa13.36□□□□□ -0.27
SOCS3-201ENST00000330871 MUC6Q6W4X9 2439 aa13.35□□□□□ -0.27
SOCS3-201ENST00000330871 ATOX1O00244 68 aa13.35□□□□□ -0.27
SOCS3-201ENST00000330871 NDUFA4O00483 81 aa13.35□□□□□ -0.27
SOCS3-201ENST00000330871 WIPF1O43516 503 aa13.34□□□□□ -0.27
SOCS3-201ENST00000330871 IGHV3-11P01762 117 aa13.34□□□□□ -0.27
SOCS3-201ENST00000330871 C19orf54Q5BKX5 351 aa13.34□□□□□ -0.27
SOCS3-201ENST00000330871 FAM218AQ96MZ4 157 aa13.34□□□□□ -0.27
SOCS3-201ENST00000330871 Q9HAA7 133 aa13.34□□□□□ -0.27
SOCS3-201ENST00000330871 IGHV3-16A0A0C4DH30 117 aa13.33□□□□□ -0.27
SOCS3-201ENST00000330871 IGKV3D-7A0A0C4DH55 119 aa13.33□□□□□ -0.27
SOCS3-201ENST00000330871 COL6A6A6NMZ7 2263 aa13.33□□□□□ -0.27
SOCS3-201ENST00000330871 CRYBG3Q68DQ2 2970 aa13.33□□□□□ -0.28
SOCS3-201ENST00000330871 EDN2P20800 178 aa13.33□□□□□ -0.28
SOCS3-201ENST00000330871 HIST1H4AP62805 103 aaKnown RBP13.33□□□□□ -0.28
SOCS3-201ENST00000330871 MOB4Q9Y3A3 225 aa13.33□□□□□ -0.28
SOCS3-201ENST00000330871 HRCT1Q6UXD1 115 aa13.33□□□□□ -0.28
SOCS3-201ENST00000330871 LINC00308Q8TCZ7 52 aa13.33□□□□□ -0.28
SOCS3-201ENST00000330871 SPTAN1Q13813 2472 aaKnown RBP13.32□□□□□ -0.28
SOCS3-201ENST00000330871 IGHV3OR16-10A0A075B7F0 116 aa13.32□□□□□ -0.28
SOCS3-201ENST00000330871 A0A087WVE0 104 aa13.32□□□□□ -0.28
SOCS3-201ENST00000330871 PROK1P58294 105 aa13.32□□□□□ -0.28
SOCS3-201ENST00000330871 BEAN1Q3B7T3 259 aa13.32□□□□□ -0.28
SOCS3-201ENST00000330871 C9orf85Q96MD7 179 aa13.32□□□□□ -0.28
SOCS3-201ENST00000330871 HOXD3P31249 432 aaPredicted RBP13.31□□□□□ -0.28
SOCS3-201ENST00000330871 RNF152Q8N8N0 203 aa13.31□□□□□ -0.28
SOCS3-201ENST00000330871 Q9UF83 564 aa13.31□□□□□ -0.28
SOCS3-201ENST00000330871 CDKN2A-AS1Q9UH64 79 aa13.31□□□□□ -0.28
SOCS3-201ENST00000330871 IGHG2P01859 326 aa13.3□□□□□ -0.28
SOCS3-201ENST00000330871 LMO4P61968 165 aa13.3□□□□□ -0.28
SOCS3-201ENST00000330871 RHPN1-AS1Q9BWJ2 59 aa13.3□□□□□ -0.28
SOCS3-201ENST00000330871 SORL1Q92673 2214 aa13.3□□□□□ -0.28
SOCS3-201ENST00000330871 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.3□□□□□ -0.28
SOCS3-201ENST00000330871 IGKV2-29A2NJV5 120 aaPredicted RBP13.3□□□□□ -0.28
SOCS3-201ENST00000330871 RPL18AQ02543 176 aaKnown RBP13.3□□□□□ -0.28
SOCS3-201ENST00000330871 PTPRQQ9UMZ3 2332 aa13.29□□□□□ -0.28
SOCS3-201ENST00000330871 TINCRA0A1B0GVN0 87 aa13.29□□□□□ -0.28
SOCS3-201ENST00000330871 A0A1W2PPR1 153 aa13.29□□□□□ -0.28
SOCS3-201ENST00000330871 PYGO1Q9Y3Y4 419 aa13.29□□□□□ -0.28
SOCS3-201ENST00000330871 ATRXP46100 2492 aa13.29□□□□□ -0.28
SOCS3-201ENST00000330871 SOSTDC1Q6X4U4 206 aa13.29□□□□□ -0.28
SOCS3-201ENST00000330871 BPESC1Q9GZL8 116 aa13.28□□□□□ -0.28
SOCS3-201ENST00000330871 Q9H8V8 135 aa13.28□□□□□ -0.28
SOCS3-201ENST00000330871 F5H768 121 aa13.27□□□□□ -0.28
SOCS3-201ENST00000330871 TIMM17BO60830 172 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms