RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 A0A0J9YXV3 536 aa9.46□□□□□ -0.9
CTHRC1-201ENST00000330295 SRP19P09132 144 aaKnown RBP9.46□□□□□ -0.9
CTHRC1-201ENST00000330295 NTF3P20783 257 aa9.46□□□□□ -0.9
CTHRC1-201ENST00000330295 KRTAP10-8P60410 259 aa9.46□□□□□ -0.9
CTHRC1-201ENST00000330295 RAB14P61106 215 aa9.46□□□□□ -0.9
CTHRC1-201ENST00000330295 TWIST1Q15672 202 aa9.46□□□□□ -0.9
CTHRC1-201ENST00000330295 C15orf54Q8N8G6 183 aa9.46□□□□□ -0.9
CTHRC1-201ENST00000330295 OR10G8Q8NGN5 311 aa9.46□□□□□ -0.9
CTHRC1-201ENST00000330295 SMDT1Q9H4I9 107 aa9.46□□□□□ -0.9
CTHRC1-201ENST00000330295 FSIP2Q5CZC0 6907 aa9.45□□□□□ -0.9
CTHRC1-201ENST00000330295 CTRLP40313 264 aa9.45□□□□□ -0.9
CTHRC1-201ENST00000330295 UBE2D3P61077 147 aa9.45□□□□□ -0.9
CTHRC1-201ENST00000330295 PKIAP61925 76 aa9.45□□□□□ -0.9
CTHRC1-201ENST00000330295 UBE2D2P62837 147 aa9.45□□□□□ -0.9
CTHRC1-201ENST00000330295 ELOBQ15370 118 aa9.45□□□□□ -0.9
CTHRC1-201ENST00000330295 TMEM241Q24JQ0 296 aa9.45□□□□□ -0.9
CTHRC1-201ENST00000330295 DAZ4Q86SG3 579 aaKnown RBP9.45□□□□□ -0.9
CTHRC1-201ENST00000330295 DAZ3Q9NR90 486 aaKnown RBP9.45□□□□□ -0.9
CTHRC1-201ENST00000330295 A0A087WX48 190 aa9.44□□□□□ -0.9
CTHRC1-201ENST00000330295 CT83Q5H943 113 aa9.44□□□□□ -0.9
CTHRC1-201ENST00000330295 DNAJC30Q96LL9 226 aa9.44□□□□□ -0.9
CTHRC1-201ENST00000330295 Q9UF83 564 aa9.44□□□□□ -0.9
CTHRC1-201ENST00000330295 COX11Q9Y6N1 276 aa9.44□□□□□ -0.9
CTHRC1-201ENST00000330295 KIF25-AS1Q9Y6Z4 181 aa9.44□□□□□ -0.9
CTHRC1-201ENST00000330295 LINC01551Q86U37 167 aa9.43□□□□□ -0.9
CTHRC1-201ENST00000330295 NEXN-AS1Q8NBZ9 246 aa9.43□□□□□ -0.9
CTHRC1-201ENST00000330295 CHCHD7Q9BUK0 85 aa9.43□□□□□ -0.9
CTHRC1-201ENST00000330295 CNFNQ9BYD5 112 aa9.43□□□□□ -0.9
CTHRC1-201ENST00000330295 OSTCQ9NRP0 149 aa9.43□□□□□ -0.9
CTHRC1-201ENST00000330295 TMEM262E9PQX1 116 aa9.42□□□□□ -0.9
CTHRC1-201ENST00000330295 RMI2Q96E14 147 aa9.42□□□□□ -0.9
CTHRC1-201ENST00000330295 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.42□□□□□ -0.9
CTHRC1-201ENST00000330295 TRBV6-8A0A0A6YYG3 113 aa9.41□□□□□ -0.9
CTHRC1-201ENST00000330295 FAM231BA6NCW3 169 aa9.41□□□□□ -0.9
CTHRC1-201ENST00000330295 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.41□□□□□ -0.9
CTHRC1-201ENST00000330295 M0QY20 66 aa9.41□□□□□ -0.9
CTHRC1-201ENST00000330295 SUMO4Q6EEV6 95 aa9.41□□□□□ -0.9
CTHRC1-201ENST00000330295 RASL11AQ6T310 242 aa9.41□□□□□ -0.9
CTHRC1-201ENST00000330295 TSKUQ8WUA8 353 aa9.41□□□□□ -0.9
CTHRC1-201ENST00000330295 PGLYRP4Q96LB8 373 aa9.41□□□□□ -0.9
CTHRC1-201ENST00000330295 GFRA4Q9GZZ7 299 aa9.41□□□□□ -0.9
CTHRC1-201ENST00000330295 NAT8Q9UHE5 227 aa9.41□□□□□ -0.9
CTHRC1-201ENST00000330295 NIT1Q86X76 327 aa9.4□□□□□ -0.9
CTHRC1-201ENST00000330295 CHCHD5Q9BSY4 110 aa9.4□□□□□ -0.9
CTHRC1-201ENST00000330295 TRBV25-1A0A075B6N4 114 aa9.39□□□□□ -0.91
CTHRC1-201ENST00000330295 PANO1I0J062 215 aa9.39□□□□□ -0.91
CTHRC1-201ENST00000330295 FOXA3P55318 350 aaPredicted RBP9.39□□□□□ -0.91
CTHRC1-201ENST00000330295 ADIRFQ15847 76 aa9.39□□□□□ -0.91
CTHRC1-201ENST00000330295 GTSF1Q8WW33 167 aa9.39□□□□□ -0.91
CTHRC1-201ENST00000330295 NIT2Q9NQR4 276 aa9.39□□□□□ -0.91
CTHRC1-201ENST00000330295 A0A1B0GUT8 65 aa9.38□□□□□ -0.91
CTHRC1-201ENST00000330295 HIGD1CA8MV81 97 aa9.38□□□□□ -0.91
CTHRC1-201ENST00000330295 IGHV1-24A0A0C4DH33 117 aa9.37□□□□□ -0.91
CTHRC1-201ENST00000330295 RPL23P62829 140 aaKnown RBP9.37□□□□□ -0.91
CTHRC1-201ENST00000330295 Q0VG73 95 aa9.37□□□□□ -0.91
CTHRC1-201ENST00000330295 RIGQ13278 110 aa9.37□□□□□ -0.91
CTHRC1-201ENST00000330295 ISOC2Q96AB3 205 aa9.37□□□□□ -0.91
CTHRC1-201ENST00000330295 KLK12Q9UKR0 248 aa9.37□□□□□ -0.91
CTHRC1-201ENST00000330295 IGKV2D-24A0A075B6R9 120 aa9.36□□□□□ -0.91
CTHRC1-201ENST00000330295 CRPP02741 224 aa9.36□□□□□ -0.91
CTHRC1-201ENST00000330295 C9JQL5 133 aa9.35□□□□□ -0.91
CTHRC1-201ENST00000330295 COTL1Q14019 142 aa9.35□□□□□ -0.91
CTHRC1-201ENST00000330295 C14orf177Q52M58 125 aa9.35□□□□□ -0.91
CTHRC1-201ENST00000330295 UBE2WQ96B02 151 aa9.35□□□□□ -0.91
CTHRC1-201ENST00000330295 NAT8BQ9UHF3 227 aa9.35□□□□□ -0.91
CTHRC1-201ENST00000330295 ANGP03950 147 aaKnown RBP9.34□□□□□ -0.91
CTHRC1-201ENST00000330295 SRSF3P84103 164 aaKnown RBP9.34□□□□□ -0.91
CTHRC1-201ENST00000330295 IQCJQ1A5X6 159 aa9.34□□□□□ -0.91
CTHRC1-201ENST00000330295 TMEM243Q9BU79 118 aa9.34□□□□□ -0.91
CTHRC1-201ENST00000330295 V9GYV3 84 aa9.34□□□□□ -0.91
CTHRC1-201ENST00000330295 UBE2L6O14933 153 aa9.33□□□□□ -0.92
CTHRC1-201ENST00000330295 GATD1Q8NB37 220 aa9.33□□□□□ -0.92
CTHRC1-201ENST00000330295 TMEM191AQ9H0A3 160 aa9.33□□□□□ -0.92
CTHRC1-201ENST00000330295 TRAV26-2A0A0B4J265 109 aa9.32□□□□□ -0.92
CTHRC1-201ENST00000330295 A0A1B0GW15 77 aa9.32□□□□□ -0.92
CTHRC1-201ENST00000330295 PPP1R2P9O14990 202 aa9.32□□□□□ -0.92
CTHRC1-201ENST00000330295 PPP1R17O96001 155 aa9.32□□□□□ -0.92
CTHRC1-201ENST00000330295 S100A8P05109 93 aa9.32□□□□□ -0.92
CTHRC1-201ENST00000330295 AMTP48728 403 aa9.32□□□□□ -0.92
CTHRC1-201ENST00000330295 GAGE6Q13070 117 aa9.32□□□□□ -0.92
CTHRC1-201ENST00000330295 REG3GQ6UW15 175 aa9.32□□□□□ -0.92
CTHRC1-201ENST00000330295 NTM-AS1Q6ZSK4 140 aa9.32□□□□□ -0.92
CTHRC1-201ENST00000330295 C9orf163Q8N9P6 203 aa9.32□□□□□ -0.92
CTHRC1-201ENST00000330295 NUP35Q8NFH5 326 aa9.32□□□□□ -0.92
CTHRC1-201ENST00000330295 PHOX2AO14813 284 aa9.31□□□□□ -0.92
CTHRC1-201ENST00000330295 NCR2O95944 276 aa9.31□□□□□ -0.92
CTHRC1-201ENST00000330295 MPV17L2Q567V2 206 aa9.31□□□□□ -0.92
CTHRC1-201ENST00000330295 ATRAIDQ6UW56 229 aa9.31□□□□□ -0.92
CTHRC1-201ENST00000330295 MRAP2Q96G30 205 aa9.31□□□□□ -0.92
CTHRC1-201ENST00000330295 C1orf43Q9BWL3 253 aa9.31□□□□□ -0.92
CTHRC1-201ENST00000330295 SMIM27A0A1W2PRY6 76 aa9.3□□□□□ -0.92
CTHRC1-201ENST00000330295 RBX1P62877 108 aa9.3□□□□□ -0.92
CTHRC1-201ENST00000330295 PNRC1Q12796 327 aaPredicted RBP9.3□□□□□ -0.92
CTHRC1-201ENST00000330295 CIRBPQ14011 172 aaKnown RBP9.3□□□□□ -0.92
CTHRC1-201ENST00000330295 MIAQ16674 131 aa9.3□□□□□ -0.92
CTHRC1-201ENST00000330295 CLLU1Q5K131 121 aa9.3□□□□□ -0.92
CTHRC1-201ENST00000330295 ST20Q9HBF5 79 aa9.3□□□□□ -0.92
CTHRC1-201ENST00000330295 SDHAF1A6NFY7 115 aa9.29□□□□□ -0.92
CTHRC1-201ENST00000330295 PMCHP20382 165 aa9.29□□□□□ -0.92
CTHRC1-201ENST00000330295 SDIM1Q6ZPB5 146 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms