RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 FAM110DQ8TAY7 271 aaPredicted RBP7.74□□□□□ -1.17
SF3B2-201ENST00000322535 RPL39LQ96EH5 51 aaKnown RBP7.74□□□□□ -1.17
SF3B2-201ENST00000322535 ITPR3Q14573 2671 aa7.74□□□□□ -1.17
SF3B2-201ENST00000322535 IGHV3-35A0A0C4DH35 117 aa7.74□□□□□ -1.17
SF3B2-201ENST00000322535 RPL27AP46776 148 aaKnown RBP7.74□□□□□ -1.17
SF3B2-201ENST00000322535 C9orf139Q6ZV77 190 aa7.74□□□□□ -1.17
SF3B2-201ENST00000322535 FAM223AQ8IWN6 122 aa7.74□□□□□ -1.17
SF3B2-201ENST00000322535 C20orf173Q96LM9 149 aa7.74□□□□□ -1.17
SF3B2-201ENST00000322535 SMIM2Q9BVW6 85 aa7.74□□□□□ -1.17
SF3B2-201ENST00000322535 KAAG1Q9UBP8 84 aa7.74□□□□□ -1.17
SF3B2-201ENST00000322535 FLNAP21333 2647 aaKnown RBP7.74□□□□□ -1.17
SF3B2-201ENST00000322535 ZNF575Q86XF7 245 aa7.73□□□□□ -1.17
SF3B2-201ENST00000322535 NACAE9PAV3 2078 aa7.73□□□□□ -1.17
SF3B2-201ENST00000322535 IGKV1-17P01599 117 aa7.73□□□□□ -1.17
SF3B2-201ENST00000322535 MGPP08493 103 aa7.73□□□□□ -1.17
SF3B2-201ENST00000322535 VMA21Q3ZAQ7 101 aa7.73□□□□□ -1.17
SF3B2-201ENST00000322535 SERP2Q8N6R1 65 aa7.73□□□□□ -1.17
SF3B2-201ENST00000322535 SPANXDQ9BXN6 97 aa7.73□□□□□ -1.17
SF3B2-201ENST00000322535 MTORP42345 2549 aa7.73□□□□□ -1.17
SF3B2-201ENST00000322535 UNC79Q9P2D8 2635 aa7.73□□□□□ -1.17
SF3B2-201ENST00000322535 M0R381 172 aa7.72□□□□□ -1.17
SF3B2-201ENST00000322535 UBE2E1P51965 193 aa7.72□□□□□ -1.17
SF3B2-201ENST00000322535 IGHV4-30-2A0A087WSY4 118 aa7.72□□□□□ -1.17
SF3B2-201ENST00000322535 TOMM6Q96B49 74 aa7.72□□□□□ -1.17
SF3B2-201ENST00000322535 PEMTQ9UBM1 199 aa7.72□□□□□ -1.17
SF3B2-201ENST00000322535 IGHV4-61A0A0C4DH41 118 aa7.72□□□□□ -1.17
SF3B2-201ENST00000322535 RPL18AQ02543 176 aaKnown RBP7.72□□□□□ -1.17
SF3B2-201ENST00000322535 SS18Q15532 418 aa7.72□□□□□ -1.17
SF3B2-201ENST00000322535 ORMDL2Q53FV1 153 aa7.72□□□□□ -1.17
SF3B2-201ENST00000322535 EPM2AB3EWF7 344 aa7.71□□□□□ -1.18
SF3B2-201ENST00000322535 H3BRN7 92 aa7.71□□□□□ -1.18
SF3B2-201ENST00000322535 IGHV3-23P01764 117 aa7.71□□□□□ -1.18
SF3B2-201ENST00000322535 CXCL5P42830 114 aa7.71□□□□□ -1.18
SF3B2-201ENST00000322535 SYNJ2BPP57105 145 aa7.71□□□□□ -1.18
SF3B2-201ENST00000322535 C4orf48Q5BLP8 95 aa7.71□□□□□ -1.18
SF3B2-201ENST00000322535 TRAV12-2A0A075B6T6 113 aa7.7□□□□□ -1.18
SF3B2-201ENST00000322535 H3BT86 120 aa7.7□□□□□ -1.18
SF3B2-201ENST00000322535 IGLV2-23P01705 113 aa7.7□□□□□ -1.18
SF3B2-201ENST00000322535 PSMB8P28062 276 aa7.7□□□□□ -1.18
SF3B2-201ENST00000322535 SUMO2P61956 95 aaKnown RBP7.7□□□□□ -1.18
SF3B2-201ENST00000322535 LYPD1Q8N2G4 141 aa7.7□□□□□ -1.18
SF3B2-201ENST00000322535 RNF182Q8N6D2 247 aa7.7□□□□□ -1.18
SF3B2-201ENST00000322535 PRAC2D3DTV9 90 aa7.7□□□□□ -1.18
SF3B2-201ENST00000322535 COX6CP09669 75 aa7.7□□□□□ -1.18
SF3B2-201ENST00000322535 RPL39P62891 51 aaKnown RBP7.7□□□□□ -1.18
SF3B2-201ENST00000322535 SDIM1Q6ZPB5 146 aa7.7□□□□□ -1.18
SF3B2-201ENST00000322535 VMO1Q7Z5L0 202 aa7.7□□□□□ -1.18
SF3B2-201ENST00000322535 DYNAPQ8N1N2 210 aa7.7□□□□□ -1.18
SF3B2-201ENST00000322535 ZNF491Q8N8L2 437 aa7.7□□□□□ -1.18
SF3B2-201ENST00000322535 C11orf21Q9P2W6 132 aa7.7□□□□□ -1.18
SF3B2-201ENST00000322535 LINC00474Q9P2X8 69 aa7.7□□□□□ -1.18
SF3B2-201ENST00000322535 MYO9AB2RTY4 2548 aa7.69□□□□□ -1.18
SF3B2-201ENST00000322535 A0A087WVE0 104 aa7.69□□□□□ -1.18
SF3B2-201ENST00000322535 IGKV3D-20A0A0C4DH25 116 aa7.69□□□□□ -1.18
SF3B2-201ENST00000322535 ZNF833PQ6ZTB9 187 aa7.69□□□□□ -1.18
SF3B2-201ENST00000322535 LINC00574Q9H8X3 128 aa7.69□□□□□ -1.18
SF3B2-201ENST00000322535 ICOSQ9Y6W8 199 aa7.69□□□□□ -1.18
SF3B2-201ENST00000322535 LMO4P61968 165 aa7.69□□□□□ -1.18
SF3B2-201ENST00000322535 BRD3OSQ6XYD6 125 aa7.69□□□□□ -1.18
SF3B2-201ENST00000322535 IGLV4-69A0A075B6H9 119 aa7.68□□□□□ -1.18
SF3B2-201ENST00000322535 BUB1B-PAK6H3BSN5 160 aa7.68□□□□□ -1.18
SF3B2-201ENST00000322535 PMAIP1Q13794 54 aa7.68□□□□□ -1.18
SF3B2-201ENST00000322535 ZNF580Q9UK33 172 aa7.68□□□□□ -1.18
SF3B2-201ENST00000322535 IGHV3OR16-13A0A075B7E8 117 aa7.68□□□□□ -1.18
SF3B2-201ENST00000322535 IGHV3-74A0A0B4J1X5 117 aa7.68□□□□□ -1.18
SF3B2-201ENST00000322535 IGHV3-66A0A0C4DH42 116 aa7.68□□□□□ -1.18
SF3B2-201ENST00000322535 ACYP1P07311 99 aa7.68□□□□□ -1.18
SF3B2-201ENST00000322535 IGLV1-47P01700 117 aa7.68□□□□□ -1.18
SF3B2-201ENST00000322535 A0A0B4J2C4 111 aa7.67□□□□□ -1.18
SF3B2-201ENST00000322535 OPRPNQ99935 248 aaPredicted RBP7.67□□□□□ -1.18
SF3B2-201ENST00000322535 CNFNQ9BYD5 112 aa7.67□□□□□ -1.18
SF3B2-201ENST00000322535 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.67□□□□□ -1.18
SF3B2-201ENST00000322535 IGHV1-3A0A0C4DH29 117 aa7.67□□□□□ -1.18
SF3B2-201ENST00000322535 DAZ4Q86SG3 579 aaKnown RBP7.67□□□□□ -1.18
SF3B2-201ENST00000322535 TMEM243Q9BU79 118 aa7.67□□□□□ -1.18
SF3B2-201ENST00000322535 DAZ1Q9NQZ3 744 aaKnown RBP7.67□□□□□ -1.18
SF3B2-201ENST00000322535 SERP1Q9Y6X1 66 aa7.67□□□□□ -1.18
SF3B2-201ENST00000322535 TRBV30A0A0K0K1B3 111 aa7.66□□□□□ -1.18
SF3B2-201ENST00000322535 TMEM223A0PJW6 202 aa7.66□□□□□ -1.18
SF3B2-201ENST00000322535 FAM223BA6NKX1 122 aa7.66□□□□□ -1.18
SF3B2-201ENST00000322535 PDZD2O15018 2839 aa7.66□□□□□ -1.18
SF3B2-201ENST00000322535 IGKV3D-7A0A0C4DH55 119 aa7.66□□□□□ -1.18
SF3B2-201ENST00000322535 LY6G5BQ8NDX9 201 aa7.66□□□□□ -1.18
SF3B2-201ENST00000322535 I3L2K1 104 aa7.65□□□□□ -1.18
SF3B2-201ENST00000322535 TSHBP01222 138 aa7.65□□□□□ -1.18
SF3B2-201ENST00000322535 PLA2G2AP14555 144 aa7.65□□□□□ -1.18
SF3B2-201ENST00000322535 MRGPRG-AS1Q2M3A8 158 aa7.65□□□□□ -1.18
SF3B2-201ENST00000322535 AMELXQ99217 191 aa7.65□□□□□ -1.18
SF3B2-201ENST00000322535 I3L3M4 83 aa7.65□□□□□ -1.19
SF3B2-201ENST00000322535 AKAP9Q99996 3911 aa7.64□□□□□ -1.19
SF3B2-201ENST00000322535 RNF223E7ERA6 249 aa7.64□□□□□ -1.19
SF3B2-201ENST00000322535 S100A4P26447 101 aaKnown RBP7.64□□□□□ -1.19
SF3B2-201ENST00000322535 DCANP1Q8TF63 244 aa7.64□□□□□ -1.19
SF3B2-201ENST00000322535 SLC50A1Q9BRV3 221 aa7.64□□□□□ -1.19
SF3B2-201ENST00000322535 SMIM26A0A096LP01 95 aa7.64□□□□□ -1.19
SF3B2-201ENST00000322535 IGHV3-49A0A0A0MS15 119 aa7.64□□□□□ -1.19
SF3B2-201ENST00000322535 NDPQ00604 133 aa7.64□□□□□ -1.19
SF3B2-201ENST00000322535 DAND5Q8N907 189 aa7.64□□□□□ -1.19
SF3B2-201ENST00000322535 IGHV7-4-1A0A0J9YVY3 117 aa7.63□□□□□ -1.19
SF3B2-201ENST00000322535 USP17L23D6RBM5 183 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms