RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 ZNF491Q8N8L2 437 aa7.54□□□□□ -1.2
COL12A1-201ENST00000322507 LRP4O75096 1905 aa7.54□□□□□ -1.2
COL12A1-201ENST00000322507 IGKV2D-26A0A0A0MRZ7 120 aa7.54□□□□□ -1.2
COL12A1-201ENST00000322507 C9orf66Q5T8R8 295 aa7.54□□□□□ -1.2
COL12A1-201ENST00000322507 EBI3Q14213 229 aa7.54□□□□□ -1.2
COL12A1-201ENST00000322507 COL4A6Q14031 1691 aa7.54□□□□□ -1.2
COL12A1-201ENST00000322507 WIPF3A6NGB9 483 aa7.53□□□□□ -1.2
COL12A1-201ENST00000322507 IGF1P05019 195 aa7.53□□□□□ -1.2
COL12A1-201ENST00000322507 RNASE13Q5GAN3 156 aaKnown RBP7.53□□□□□ -1.2
COL12A1-201ENST00000322507 ANKRD11Q6UB99 2663 aaPredicted RBP7.53□□□□□ -1.2
COL12A1-201ENST00000322507 TRBV7-6A0A0J9YX20 115 aa7.53□□□□□ -1.2
COL12A1-201ENST00000322507 SOSTDC1Q6X4U4 206 aa7.53□□□□□ -1.2
COL12A1-201ENST00000322507 TDRG1Q3Y452 100 aa7.52□□□□□ -1.2
COL12A1-201ENST00000322507 IGHV4-59P01825 116 aa7.52□□□□□ -1.21
COL12A1-201ENST00000322507 K7EQD1 137 aa7.52□□□□□ -1.21
COL12A1-201ENST00000322507 ZNF706Q9Y5V0 76 aaPredicted RBP7.52□□□□□ -1.21
COL12A1-201ENST00000322507 K7EMT4 169 aa7.52□□□□□ -1.21
COL12A1-201ENST00000322507 XGP55808 180 aa7.52□□□□□ -1.21
COL12A1-201ENST00000322507 B9D2Q9BPU9 175 aa7.52□□□□□ -1.21
COL12A1-201ENST00000322507 RAI1Q7Z5J4 1906 aaPredicted RBP7.52□□□□□ -1.21
COL12A1-201ENST00000322507 ZNF726P1Q15940 193 aa7.51□□□□□ -1.21
COL12A1-201ENST00000322507 RNF223E7ERA6 249 aa7.51□□□□□ -1.21
COL12A1-201ENST00000322507 DKK4Q9UBT3 224 aa7.51□□□□□ -1.21
COL12A1-201ENST00000322507 INSL3P51460 131 aa7.51□□□□□ -1.21
COL12A1-201ENST00000322507 WFDC10BQ8IUB3 73 aa7.51□□□□□ -1.21
COL12A1-201ENST00000322507 COL5A1P20908 1838 aaPredicted RBP7.51□□□□□ -1.21
COL12A1-201ENST00000322507 SPART-AS1P0CW21 52 aa7.51□□□□□ -1.21
COL12A1-201ENST00000322507 CGB3P0DN86 165 aa7.51□□□□□ -1.21
COL12A1-201ENST00000322507 C14orf177Q52M58 125 aa7.51□□□□□ -1.21
COL12A1-201ENST00000322507 Q6ZR03 302 aa7.51□□□□□ -1.21
COL12A1-201ENST00000322507 CFAP126Q5VTH2 177 aa7.51□□□□□ -1.21
COL12A1-201ENST00000322507 A8MZ25 164 aa7.5□□□□□ -1.21
COL12A1-201ENST00000322507 PLA2G2CQ5R387 149 aa7.5□□□□□ -1.21
COL12A1-201ENST00000322507 IL17DQ8TAD2 202 aa7.5□□□□□ -1.21
COL12A1-201ENST00000322507 SPINT4Q6UDR6 99 aa7.5□□□□□ -1.21
COL12A1-201ENST00000322507 LINC00269Q8N2A0 174 aa7.5□□□□□ -1.21
COL12A1-201ENST00000322507 IGF2BP2-AS1Q96M15 143 aa7.5□□□□□ -1.21
COL12A1-201ENST00000322507 KRTAP27-1Q3LI81 207 aa7.5□□□□□ -1.21
COL12A1-201ENST00000322507 WDR86Q86TI4 376 aa7.5□□□□□ -1.21
COL12A1-201ENST00000322507 LINC00467Q9BRT7 94 aa7.5□□□□□ -1.21
COL12A1-201ENST00000322507 PPDPFQ9H3Y8 114 aa7.5□□□□□ -1.21
COL12A1-201ENST00000322507 NDUFA1O15239 70 aa7.5□□□□□ -1.21
COL12A1-201ENST00000322507 CTRLP40313 264 aa7.5□□□□□ -1.21
COL12A1-201ENST00000322507 G3V318 75 aa7.5□□□□□ -1.21
COL12A1-201ENST00000322507 TMEM223A0PJW6 202 aa7.5□□□□□ -1.21
COL12A1-201ENST00000322507 IGHV4-4A0A075B6R2 117 aa7.5□□□□□ -1.21
COL12A1-201ENST00000322507 hDV103S1A0JD37 113 aa7.5□□□□□ -1.21
COL12A1-201ENST00000322507 CGB7P0DN87 165 aa7.5□□□□□ -1.21
COL12A1-201ENST00000322507 Q6ZSR3 168 aa7.5□□□□□ -1.21
COL12A1-201ENST00000322507 XCL1P47992 114 aa7.49□□□□□ -1.21
COL12A1-201ENST00000322507 CCL24O00175 119 aa7.49□□□□□ -1.21
COL12A1-201ENST00000322507 CCL18P55774 89 aa7.49□□□□□ -1.21
COL12A1-201ENST00000322507 TRBV10-1A0A0K0K1A3 114 aa7.49□□□□□ -1.21
COL12A1-201ENST00000322507 IGKV1-39P01597 117 aa7.49□□□□□ -1.21
COL12A1-201ENST00000322507 IGKV1D-39P04432 117 aa7.49□□□□□ -1.21
COL12A1-201ENST00000322507 UBE2D3P61077 147 aa7.49□□□□□ -1.21
COL12A1-201ENST00000322507 EIF4EBP1Q13541 118 aaPredicted RBP7.49□□□□□ -1.21
COL12A1-201ENST00000322507 Q96MF0 132 aa7.49□□□□□ -1.21
COL12A1-201ENST00000322507 H7C423 109 aa7.49□□□□□ -1.21
COL12A1-201ENST00000322507 CFHR3Q02985 330 aa7.49□□□□□ -1.21
COL12A1-201ENST00000322507 GPHB5Q86YW7 130 aa7.49□□□□□ -1.21
COL12A1-201ENST00000322507 ODF3Q96PU9 254 aa7.48□□□□□ -1.21
COL12A1-201ENST00000322507 NCOR2Q9Y618 2525 aa7.48□□□□□ -1.21
COL12A1-201ENST00000322507 RUSC1-AS1Q66K80 236 aa7.48□□□□□ -1.21
COL12A1-201ENST00000322507 SEM1Q6ZVN7 128 aa7.48□□□□□ -1.21
COL12A1-201ENST00000322507 USP9XQ93008 2570 aaPredicted RBP7.48□□□□□ -1.21
COL12A1-201ENST00000322507 Q8N6K4 173 aa7.48□□□□□ -1.21
COL12A1-201ENST00000322507 IGLV11-55A0A075B6I3 123 aa7.48□□□□□ -1.21
COL12A1-201ENST00000322507 MDFICQ9P1T7 246 aa7.48□□□□□ -1.21
COL12A1-201ENST00000322507 NOP10Q9NPE3 64 aaKnown RBP7.48□□□□□ -1.21
COL12A1-201ENST00000322507 IGFL2Q6UWQ7 119 aa7.48□□□□□ -1.21
COL12A1-201ENST00000322507 PROK2Q9HC23 129 aa7.48□□□□□ -1.21
COL12A1-201ENST00000322507 MLANAQ16655 118 aa7.47□□□□□ -1.21
COL12A1-201ENST00000322507 IGFL4Q6B9Z1 124 aa7.47□□□□□ -1.21
COL12A1-201ENST00000322507 ANKRD17O75179 2603 aaKnown RBP7.47□□□□□ -1.21
COL12A1-201ENST00000322507 Q6ZQY7 126 aa7.47□□□□□ -1.21
COL12A1-201ENST00000322507 IGKV2D-24A0A075B6R9 120 aa7.47□□□□□ -1.21
COL12A1-201ENST00000322507 TP73-AS1Q9UF72 201 aa7.47□□□□□ -1.21
COL12A1-201ENST00000322507 IGHV3-16A0A0C4DH30 117 aa7.47□□□□□ -1.21
COL12A1-201ENST00000322507 FSTL3O95633 263 aa7.46□□□□□ -1.21
COL12A1-201ENST00000322507 MRPS12O15235 138 aaKnown RBP7.46□□□□□ -1.21
COL12A1-201ENST00000322507 CAMK2N2Q96S95 79 aa7.46□□□□□ -1.21
COL12A1-201ENST00000322507 RPL28P46779 137 aaKnown RBP7.46□□□□□ -1.22
COL12A1-201ENST00000322507 TRBV7-7A0A0K0K1E9 115 aa7.46□□□□□ -1.22
COL12A1-201ENST00000322507 PIP4P1Q86T03 277 aa7.46□□□□□ -1.22
COL12A1-201ENST00000322507 HIGD2AQ9BW72 106 aa7.46□□□□□ -1.22
COL12A1-201ENST00000322507 PKD1L2Q7Z442 2459 aa7.46□□□□□ -1.22
COL12A1-201ENST00000322507 IGF2RP11717 2491 aa7.46□□□□□ -1.22
COL12A1-201ENST00000322507 MDFIQ99750 246 aa7.45□□□□□ -1.22
COL12A1-201ENST00000322507 Q9HAA7 133 aa7.45□□□□□ -1.22
COL12A1-201ENST00000322507 I3L2K1 104 aa7.45□□□□□ -1.22
COL12A1-201ENST00000322507 ZNF581Q9P0T4 197 aa7.45□□□□□ -1.22
COL12A1-201ENST00000322507 FAM215AQ9Y5M1 114 aa7.45□□□□□ -1.22
COL12A1-201ENST00000322507 LINC00205P59089 165 aa7.45□□□□□ -1.22
COL12A1-201ENST00000322507 LY6G6EA0A0G2JKS1 128 aa7.45□□□□□ -1.22
COL12A1-201ENST00000322507 U3KQA8 63 aa7.45□□□□□ -1.22
COL12A1-201ENST00000322507 LST1O00453 97 aa7.45□□□□□ -1.22
COL12A1-201ENST00000322507 NCR3O14931 201 aa7.45□□□□□ -1.22
COL12A1-201ENST00000322507 C4orf3Q8WVX3 66 aa7.44□□□□□ -1.22
COL12A1-201ENST00000322507 J3QKU1 62 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms