RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 TSSC4Q9Y5U2 329 aaPredicted RBP16.19■□□□□ 0.18
PNKP-201ENST00000322344 H3BMG7 143 aa16.19■□□□□ 0.18
PNKP-201ENST00000322344 CMC4P56277 68 aaPredicted RBP16.19■□□□□ 0.18
PNKP-201ENST00000322344 LYRM7Q5U5X0 104 aa16.18■□□□□ 0.18
PNKP-201ENST00000322344 NDUFA11Q86Y39 141 aa16.18■□□□□ 0.18
PNKP-201ENST00000322344 C16orf95Q9H693 158 aa16.18■□□□□ 0.18
PNKP-201ENST00000322344 UBE2D4Q9Y2X8 147 aa16.18■□□□□ 0.18
PNKP-201ENST00000322344 COTL1Q14019 142 aa16.18■□□□□ 0.18
PNKP-201ENST00000322344 GAGE13Q4V321 117 aa16.18■□□□□ 0.18
PNKP-201ENST00000322344 C11orf44Q8N8P7 122 aa16.18■□□□□ 0.18
PNKP-201ENST00000322344 IL17DQ8TAD2 202 aa16.18■□□□□ 0.18
PNKP-201ENST00000322344 APOMO95445 188 aa16.17■□□□□ 0.18
PNKP-201ENST00000322344 TSPAN13O95857 204 aa16.17■□□□□ 0.18
PNKP-201ENST00000322344 RPL24P83731 157 aaKnown RBP16.17■□□□□ 0.18
PNKP-201ENST00000322344 C1orf158Q8N1D5 194 aa16.17■□□□□ 0.18
PNKP-201ENST00000322344 CITED2Q99967 270 aaPredicted RBP16.16■□□□□ 0.18
PNKP-201ENST00000322344 TEX15Q9BXT5 2789 aa16.16■□□□□ 0.18
PNKP-201ENST00000322344 Q9UF83 564 aa16.16■□□□□ 0.18
PNKP-201ENST00000322344 ABCA12Q86UK0 2595 aa16.16■□□□□ 0.18
PNKP-201ENST00000322344 RNASE1P07998 156 aaKnown RBP16.16■□□□□ 0.18
PNKP-201ENST00000322344 AZU1P20160 251 aa16.16■□□□□ 0.18
PNKP-201ENST00000322344 TIMM21Q9BVV7 248 aa16.16■□□□□ 0.18
PNKP-201ENST00000322344 CENPEQ02224 2701 aa16.16■□□□□ 0.18
PNKP-201ENST00000322344 TINCRA0A1B0GVN0 87 aa16.15■□□□□ 0.18
PNKP-201ENST00000322344 TMEM238C9JI98 176 aa16.14■□□□□ 0.17
PNKP-201ENST00000322344 CEMP1Q6PRD7 247 aaPredicted RBP16.14■□□□□ 0.17
PNKP-201ENST00000322344 IGHV3-64A0A075B6Q5 118 aa16.14■□□□□ 0.17
PNKP-201ENST00000322344 CFC1BP0CG36 223 aa16.14■□□□□ 0.17
PNKP-201ENST00000322344 CFC1P0CG37 223 aa16.14■□□□□ 0.17
PNKP-201ENST00000322344 KRTAP1-1Q07627 177 aa16.14■□□□□ 0.17
PNKP-201ENST00000322344 WFDC2Q14508 124 aa16.14■□□□□ 0.17
PNKP-201ENST00000322344 NACAE9PAV3 2078 aa16.14■□□□□ 0.17
PNKP-201ENST00000322344 TEX48A0A1B0GUV7 120 aa16.13■□□□□ 0.17
PNKP-201ENST00000322344 IGHV3-30-3P0DP02 117 aa16.13■□□□□ 0.17
PNKP-201ENST00000322344 UBE2D3P61077 147 aa16.13■□□□□ 0.17
PNKP-201ENST00000322344 UBE2D2P62837 147 aa16.13■□□□□ 0.17
PNKP-201ENST00000322344 LINC01006Q8NI28 216 aa16.13■□□□□ 0.17
PNKP-201ENST00000322344 YAE1D1Q9NRH1 226 aa16.13■□□□□ 0.17
PNKP-201ENST00000322344 PRO0461Q9UI25 63 aa16.13■□□□□ 0.17
PNKP-201ENST00000322344 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.12■□□□□ 0.17
PNKP-201ENST00000322344 IGKV2-29A2NJV5 120 aaPredicted RBP16.12■□□□□ 0.17
PNKP-201ENST00000322344 IGHV3OR16-12A0A075B7B8 117 aa16.12■□□□□ 0.17
PNKP-201ENST00000322344 IGHV1-58A0A0C4DH39 117 aa16.12■□□□□ 0.17
PNKP-201ENST00000322344 C10orf126Q8N4M7 172 aa16.12■□□□□ 0.17
PNKP-201ENST00000322344 TRGV1A0A0A0MS02 117 aa16.11■□□□□ 0.17
PNKP-201ENST00000322344 PRO1854Q9UHT4 67 aa16.11■□□□□ 0.17
PNKP-201ENST00000322344 TMEM263Q8WUH6 116 aaKnown RBP16.11■□□□□ 0.17
PNKP-201ENST00000322344 IGHV3-38A0A0C4DH36 116 aa16.1■□□□□ 0.17
PNKP-201ENST00000322344 LOC107984156A0A0G2JMH3 177 aa16.1■□□□□ 0.17
PNKP-201ENST00000322344 A0A0J9YXY3 114 aa16.1■□□□□ 0.17
PNKP-201ENST00000322344 ARL17AQ8IVW1 177 aa16.1■□□□□ 0.17
PNKP-201ENST00000322344 TRBV10-1A0A0K0K1A3 114 aa16.09■□□□□ 0.17
PNKP-201ENST00000322344 J3QR89 54 aa16.09■□□□□ 0.17
PNKP-201ENST00000322344 Q6ZUT4 128 aa16.09■□□□□ 0.17
PNKP-201ENST00000322344 FAM110AQ9BQ89 295 aa16.09■□□□□ 0.17
PNKP-201ENST00000322344 RNASE13Q5GAN3 156 aaKnown RBP16.09■□□□□ 0.17
PNKP-201ENST00000322344 HIST2H2BCQ6DN03 193 aa16.09■□□□□ 0.17
PNKP-201ENST00000322344 APCP25054 2843 aa16.09■□□□□ 0.17
PNKP-201ENST00000322344 C21orf62-AS1Q17RA5 79 aa16.08■□□□□ 0.16
PNKP-201ENST00000322344 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.07■□□□□ 0.16
PNKP-201ENST00000322344 A0A0B4J2C4 111 aa16.07■□□□□ 0.16
PNKP-201ENST00000322344 A4D1N5 150 aa16.07■□□□□ 0.16
PNKP-201ENST00000322344 VSIG2Q96IQ7 327 aa16.07■□□□□ 0.16
PNKP-201ENST00000322344 TRBV20-1A0A075B6N2 111 aa16.07■□□□□ 0.16
PNKP-201ENST00000322344 TRAV4A0A0B4J268 109 aa16.07■□□□□ 0.16
PNKP-201ENST00000322344 GEMIN7Q9H840 131 aaKnown RBP16.07■□□□□ 0.16
PNKP-201ENST00000322344 PSMB2P49721 201 aa16.06■□□□□ 0.16
PNKP-201ENST00000322344 TIRAPP58753 221 aa16.06■□□□□ 0.16
PNKP-201ENST00000322344 RPL36AP83881 106 aaKnown RBP16.06■□□□□ 0.16
PNKP-201ENST00000322344 MUSTN1Q8IVN3 82 aa16.06■□□□□ 0.16
PNKP-201ENST00000322344 RPL36ALQ969Q0 106 aaKnown RBP16.06■□□□□ 0.16
PNKP-201ENST00000322344 K7EQD1 137 aa16.06■□□□□ 0.16
PNKP-201ENST00000322344 DGAT2L7PQ6IED9 249 aa16.06■□□□□ 0.16
PNKP-201ENST00000322344 TRAV8-3A0A0A6YYJ7 113 aa16.05■□□□□ 0.16
PNKP-201ENST00000322344 ETDBQ3ZM63 59 aa16.05■□□□□ 0.16
PNKP-201ENST00000322344 MYO9AB2RTY4 2548 aa16.05■□□□□ 0.16
PNKP-201ENST00000322344 ITPR3Q14573 2671 aa16.04■□□□□ 0.16
PNKP-201ENST00000322344 IGLV1-51P01701 117 aa16.04■□□□□ 0.16
PNKP-201ENST00000322344 ZNF418Q8TF45 676 aaPredicted RBP16.04■□□□□ 0.16
PNKP-201ENST00000322344 NDUFA12Q9UI09 145 aa16.04■□□□□ 0.16
PNKP-201ENST00000322344 DAZ2Q13117 558 aaKnown RBP16.04■□□□□ 0.16
PNKP-201ENST00000322344 Q6ZTI0 123 aa16.04■□□□□ 0.16
PNKP-201ENST00000322344 DAZ4Q86SG3 579 aaKnown RBP16.04■□□□□ 0.16
PNKP-201ENST00000322344 DAZ3Q9NR90 486 aaKnown RBP16.04■□□□□ 0.16
PNKP-201ENST00000322344 IGLV5-45A0A087WSX0 123 aa16.03■□□□□ 0.16
PNKP-201ENST00000322344 SH2D6Q7Z4S9 175 aa16.03■□□□□ 0.16
PNKP-201ENST00000322344 SMAGPQ0VAQ4 97 aa16.02■□□□□ 0.16
PNKP-201ENST00000322344 C16orf74Q96GX8 76 aa16.02■□□□□ 0.16
PNKP-201ENST00000322344 LITAFQ99732 161 aa16.02■□□□□ 0.16
PNKP-201ENST00000322344 SPANXDQ9BXN6 97 aa16.02■□□□□ 0.16
PNKP-201ENST00000322344 SPANXCQ9NY87 97 aa16.02■□□□□ 0.16
PNKP-201ENST00000322344 SFTA2Q6UW10 78 aa16.02■□□□□ 0.15
PNKP-201ENST00000322344 ATP6V0E2Q8NHE4 81 aa16.02■□□□□ 0.15
PNKP-201ENST00000322344 C1QTNF4Q9BXJ3 329 aa16.02■□□□□ 0.15
PNKP-201ENST00000322344 IGHV3-33P01772 117 aa16.01■□□□□ 0.15
PNKP-201ENST00000322344 SPINK8P0C7L1 97 aa16.01■□□□□ 0.15
PNKP-201ENST00000322344 ZFAND6Q6FIF0 208 aa16.01■□□□□ 0.15
PNKP-201ENST00000322344 MTURNQ8N3F0 131 aa16.01■□□□□ 0.15
PNKP-201ENST00000322344 CSDC2Q9Y534 153 aaKnown RBP16.01■□□□□ 0.15
PNKP-201ENST00000322344 NDUFA7O95182 113 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 184.9 ms